RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 RXRBP28702 533 aa23.65■■□□□ 1.38
SNX17-203ENST00000440760 C4BP0C0L5 1744 aa23.65■■□□□ 1.38
SNX17-203ENST00000440760 CAMTA2O94983 1202 aa23.65■■□□□ 1.38
SNX17-203ENST00000440760 NLRP10Q86W26 655 aa23.65■■□□□ 1.38
SNX17-203ENST00000440760 KLHDC4Q8TBB5 520 aa23.65■■□□□ 1.38
SNX17-203ENST00000440760 UBN2Q6ZU65 1347 aa23.64■■□□□ 1.38
SNX17-203ENST00000440760 TRIM28Q13263 835 aaKnown RBP23.64■■□□□ 1.38
SNX17-203ENST00000440760 HSP90AB3PQ58FF7 597 aa23.64■■□□□ 1.38
SNX17-203ENST00000440760 PLEKHM2Q8IWE5 1019 aa23.64■■□□□ 1.38
SNX17-203ENST00000440760 FAM89AQ96GI7 184 aa23.63■■□□□ 1.37
SNX17-203ENST00000440760 IL1RAPL2Q9NP60 686 aa23.63■■□□□ 1.37
SNX17-203ENST00000440760 SCN7AQ01118 1682 aa23.63■■□□□ 1.37
SNX17-203ENST00000440760 FOXO4P98177 505 aa23.63■■□□□ 1.37
SNX17-203ENST00000440760 RABL6Q3YEC7 729 aaPredicted RBP23.63■■□□□ 1.37
SNX17-203ENST00000440760 POTEAQ6S8J7 498 aa23.63■■□□□ 1.37
SNX17-203ENST00000440760 SYNE4Q8N205 404 aa23.63■■□□□ 1.37
SNX17-203ENST00000440760 AMIGO3Q86WK7 504 aa23.62■■□□□ 1.37
SNX17-203ENST00000440760 LRRC4BQ9NT99 713 aa23.62■■□□□ 1.37
SNX17-203ENST00000440760 GNPATO15228 680 aa23.61■■□□□ 1.37
SNX17-203ENST00000440760 OS9Q13438 667 aaPredicted RBP23.61■■□□□ 1.37
SNX17-203ENST00000440760 LMBR1LQ6UX01 489 aa23.61■■□□□ 1.37
SNX17-203ENST00000440760 SIL1Q9H173 461 aa23.61■■□□□ 1.37
SNX17-203ENST00000440760 RHPN1Q8TCX5 695 aa23.61■■□□□ 1.37
SNX17-203ENST00000440760 NOP58Q9Y2X3 529 aaKnown RBP23.61■■□□□ 1.37
SNX17-203ENST00000440760 CHMP3Q9Y3E7 222 aa23.61■■□□□ 1.37
SNX17-203ENST00000440760 PCCAP05165 728 aaPredicted RBP23.6■■□□□ 1.37
SNX17-203ENST00000440760 RAB11FIP3O75154 756 aa23.6■■□□□ 1.37
SNX17-203ENST00000440760 C4AP0C0L4 1744 aa23.6■■□□□ 1.37
SNX17-203ENST00000440760 ZNF34Q8IZ26 560 aa23.6■■□□□ 1.37
SNX17-203ENST00000440760 RFX5P48382 616 aaPredicted RBP23.59■■□□□ 1.37
SNX17-203ENST00000440760 RC3H1Q5TC82 1133 aaKnown RBP23.59■■□□□ 1.37
SNX17-203ENST00000440760 TSHZ3Q63HK5 1081 aa23.59■■□□□ 1.37
SNX17-203ENST00000440760 ZBTB38Q8NAP3 1195 aaPredicted RBP23.59■■□□□ 1.37
SNX17-203ENST00000440760 FAM177BA6PVY3 158 aa23.58■■□□□ 1.36
SNX17-203ENST00000440760 GSPT1P15170 499 aaKnown RBP23.58■■□□□ 1.36
SNX17-203ENST00000440760 KIF1BPQ96EK5 621 aa23.58■■□□□ 1.36
SNX17-203ENST00000440760 MYH3P11055 1940 aa23.57■■□□□ 1.36
SNX17-203ENST00000440760 RPS6KA4O75676 772 aa23.57■■□□□ 1.36
SNX17-203ENST00000440760 TRMT112Q9UI30 125 aaKnown RBP23.57■■□□□ 1.36
SNX17-203ENST00000440760 SALL3Q9BXA9 1300 aa23.57■■□□□ 1.36
SNX17-203ENST00000440760 HSP90AB4PQ58FF6 505 aa23.56■■□□□ 1.36
SNX17-203ENST00000440760 BMP2KLQ5H9B9 411 aa23.56■■□□□ 1.36
SNX17-203ENST00000440760 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.56■■□□□ 1.36
SNX17-203ENST00000440760 PTPN12Q05209 780 aaKnown RBP23.56■■□□□ 1.36
SNX17-203ENST00000440760 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
SNX17-203ENST00000440760 CCDC85AQ96PX6 553 aaPredicted RBP23.56■■□□□ 1.36
SNX17-203ENST00000440760 SRP68Q9UHB9 627 aaKnown RBP23.56■■□□□ 1.36
SNX17-203ENST00000440760 PHF14O94880 888 aa23.55■■□□□ 1.36
SNX17-203ENST00000440760 TTC22Q5TAA0 569 aa23.55■■□□□ 1.36
SNX17-203ENST00000440760 SUSD4Q5VX71 490 aa23.55■■□□□ 1.36
SNX17-203ENST00000440760 NIP7Q9Y221 180 aaKnown RBP eCLIP23.55■■□□□ 1.36
SNX17-203ENST00000440760 PDE1AP54750 535 aa23.54■■□□□ 1.36
SNX17-203ENST00000440760 RTCBQ9Y3I0 505 aaKnown RBP23.54■■□□□ 1.36
SNX17-203ENST00000440760 CDHR2Q9BYE9 1310 aa23.54■■□□□ 1.36
SNX17-203ENST00000440760 TUBGCP6Q96RT7 1819 aa23.54■■□□□ 1.36
SNX17-203ENST00000440760 UBR3Q6ZT12 1888 aa23.54■■□□□ 1.36
SNX17-203ENST00000440760 TNS1Q9HBL0 1735 aaKnown RBP23.54■■□□□ 1.36
SNX17-203ENST00000440760 SASH1O94885 1247 aa23.54■■□□□ 1.36
SNX17-203ENST00000440760 SEC24BO95487 1268 aa23.54■■□□□ 1.36
SNX17-203ENST00000440760 G3BP1Q13283 466 aaKnown RBP eCLIP23.54■■□□□ 1.36
SNX17-203ENST00000440760 AK7Q96M32 723 aa23.54■■□□□ 1.36
SNX17-203ENST00000440760 MX1P20591 662 aa23.53■■□□□ 1.36
SNX17-203ENST00000440760 COPRSQ9NQ92 184 aa23.53■■□□□ 1.36
SNX17-203ENST00000440760 ZNF652Q9Y2D9 606 aa23.53■■□□□ 1.36
SNX17-203ENST00000440760 DDX60Q8IY21 1712 aaKnown RBP23.53■■□□□ 1.36
SNX17-203ENST00000440760 IRS4O14654 1257 aaPredicted RBP23.52■■□□□ 1.36
SNX17-203ENST00000440760 USPL1Q5W0Q7 1092 aa23.52■■□□□ 1.36
SNX17-203ENST00000440760 BCL2L12Q9HB09 334 aa23.52■■□□□ 1.36
SNX17-203ENST00000440760 ERC1Q8IUD2 1116 aa23.52■■□□□ 1.36
SNX17-203ENST00000440760 ZNF594Q96JF6 807 aaPredicted RBP23.52■■□□□ 1.36
SNX17-203ENST00000440760 PLA2G12BQ9BX93 195 aa23.52■■□□□ 1.36
SNX17-203ENST00000440760 LAMB2P55268 1798 aa23.51■■□□□ 1.35
SNX17-203ENST00000440760 BICDL1Q6ZP65 573 aa23.51■■□□□ 1.35
SNX17-203ENST00000440760 ARHGEF1Q92888 912 aaKnown RBP23.51■■□□□ 1.35
SNX17-203ENST00000440760 NARFQ9UHQ1 456 aa23.51■■□□□ 1.35
SNX17-203ENST00000440760 SLC27A3Q5K4L6 730 aa23.5■■□□□ 1.35
SNX17-203ENST00000440760 PROM2Q8N271 834 aa23.5■■□□□ 1.35
SNX17-203ENST00000440760 NTSR2O95665 410 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 CTSWP56202 376 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 TXNRD1Q16881 649 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 PARP10Q53GL7 1025 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 UTP14AQ9BVJ6 771 aaKnown RBP23.49■■□□□ 1.35
SNX17-203ENST00000440760 OSBPL3Q9H4L5 887 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 APBA3O96018 575 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 CLEC4GQ6UXB4 293 aa23.49■■□□□ 1.35
SNX17-203ENST00000440760 SH3TC1Q8TE82 1336 aa23.48■■□□□ 1.35
SNX17-203ENST00000440760 COL24A1Q17RW2 1714 aa23.48■■□□□ 1.35
SNX17-203ENST00000440760 HCLS1P14317 486 aaPredicted RBP23.48■■□□□ 1.35
SNX17-203ENST00000440760 CLASRPQ8N2M8 674 aaKnown RBP23.48■■□□□ 1.35
SNX17-203ENST00000440760 CASZ1Q86V15 1759 aa23.47■■□□□ 1.35
SNX17-203ENST00000440760 ZPR1O75312 459 aa23.47■■□□□ 1.35
SNX17-203ENST00000440760 CSF1RP07333 972 aa23.47■■□□□ 1.35
SNX17-203ENST00000440760 AACSQ86V21 672 aa23.47■■□□□ 1.35
SNX17-203ENST00000440760 TTLL11Q8NHH1 800 aa23.47■■□□□ 1.35
SNX17-203ENST00000440760 GREM2Q9H772 168 aa23.47■■□□□ 1.35
SNX17-203ENST00000440760 STAP2Q9UGK3 403 aa23.47■■□□□ 1.35
SNX17-203ENST00000440760 PDE8AO60658 829 aa23.46■■□□□ 1.35
SNX17-203ENST00000440760 SDSP20132 328 aa23.46■■□□□ 1.35
SNX17-203ENST00000440760 TFCP2Q12800 502 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms