RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 RIC1Q4ADV7 1423 aa23.13■■□□□ 1.29
CPSF4-205ENST00000440514 GOLGB1Q14789 3259 aaKnown RBP23.12■■□□□ 1.29
CPSF4-205ENST00000440514 FLIIQ13045 1269 aa23.12■■□□□ 1.29
CPSF4-205ENST00000440514 MYD88Q99836 296 aa23.12■■□□□ 1.29
CPSF4-205ENST00000440514 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
CPSF4-205ENST00000440514 MAP3K2Q9Y2U5 619 aa23.12■■□□□ 1.29
CPSF4-205ENST00000440514 DALRD3Q5D0E6 543 aaKnown RBP23.11■■□□□ 1.29
CPSF4-205ENST00000440514 LAMB2P55268 1798 aa23.1■■□□□ 1.29
CPSF4-205ENST00000440514 PI4KAP2A4QPH2 592 aa23.1■■□□□ 1.29
CPSF4-205ENST00000440514 GRIN3BO60391 1043 aa23.1■■□□□ 1.29
CPSF4-205ENST00000440514 KSR2Q6VAB6 950 aa23.1■■□□□ 1.29
CPSF4-205ENST00000440514 PI4KAP1Q8N8J0 262 aa23.1■■□□□ 1.29
CPSF4-205ENST00000440514 ZNF622Q969S3 477 aaKnown RBP eCLIP23.1■■□□□ 1.29
CPSF4-205ENST00000440514 DDX60Q8IY21 1712 aaKnown RBP23.1■■□□□ 1.29
CPSF4-205ENST00000440514 SRGNP10124 158 aa23.09■■□□□ 1.29
CPSF4-205ENST00000440514 METTL22Q9BUU2 404 aaPredicted RBP23.09■■□□□ 1.29
CPSF4-205ENST00000440514 TRMT112Q9UI30 125 aaKnown RBP23.09■■□□□ 1.29
CPSF4-205ENST00000440514 PDZRN3Q9UPQ7 1066 aa23.09■■□□□ 1.29
CPSF4-205ENST00000440514 CHD4Q14839 1912 aa23.09■■□□□ 1.29
CPSF4-205ENST00000440514 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.29
CPSF4-205ENST00000440514 UTRNP46939 3433 aa23.08■■□□□ 1.29
CPSF4-205ENST00000440514 FKBP5Q13451 457 aaPredicted RBP23.08■■□□□ 1.29
CPSF4-205ENST00000440514 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
CPSF4-205ENST00000440514 SYNE4Q8N205 404 aa23.08■■□□□ 1.29
CPSF4-205ENST00000440514 KLRG2A4D1S0 409 aaPredicted RBP23.07■■□□□ 1.28
CPSF4-205ENST00000440514 TTLL6Q8N841 843 aa23.07■■□□□ 1.28
CPSF4-205ENST00000440514 SLX4Q8IY92 1834 aa23.06■■□□□ 1.28
CPSF4-205ENST00000440514 STYK1Q6J9G0 422 aa23.06■■□□□ 1.28
CPSF4-205ENST00000440514 MASTLQ96GX5 879 aa23.06■■□□□ 1.28
CPSF4-205ENST00000440514 SH3TC1Q8TE82 1336 aa23.06■■□□□ 1.28
CPSF4-205ENST00000440514 TRIM28Q13263 835 aaKnown RBP23.05■■□□□ 1.28
CPSF4-205ENST00000440514 RTL5Q5HYW3 569 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-205ENST00000440514 BCL2L13Q9BXK5 485 aa23.05■■□□□ 1.28
CPSF4-205ENST00000440514 ZBED9Q6R2W3 1325 aa23.05■■□□□ 1.28
CPSF4-205ENST00000440514 HCLS1P14317 486 aaPredicted RBP23.04■■□□□ 1.28
CPSF4-205ENST00000440514 NPR1P16066 1061 aa23.04■■□□□ 1.28
CPSF4-205ENST00000440514 CRY2Q49AN0 593 aa23.04■■□□□ 1.28
CPSF4-205ENST00000440514 SSH1Q8WYL5 1049 aa23.04■■□□□ 1.28
CPSF4-205ENST00000440514 FAM89AQ96GI7 184 aa23.04■■□□□ 1.28
CPSF4-205ENST00000440514 ZNF219Q9P2Y4 722 aaPredicted RBP23.04■■□□□ 1.28
CPSF4-205ENST00000440514 F6X3S4 739 aa23.03■■□□□ 1.28
CPSF4-205ENST00000440514 IGKV5-2P06315 115 aa23.03■■□□□ 1.28
CPSF4-205ENST00000440514 SLC10A5Q5PT55 438 aa23.03■■□□□ 1.28
CPSF4-205ENST00000440514 PRPF40BQ6NWY9 871 aaKnown RBP23.03■■□□□ 1.28
CPSF4-205ENST00000440514 MRPL50Q8N5N7 158 aaKnown RBP23.03■■□□□ 1.28
CPSF4-205ENST00000440514 CNKSR1Q969H4 720 aa23.03■■□□□ 1.28
CPSF4-205ENST00000440514 CWC25Q9NXE8 425 aaPredicted RBP23.03■■□□□ 1.28
CPSF4-205ENST00000440514 NEXNQ0ZGT2 675 aa23.02■■□□□ 1.28
CPSF4-205ENST00000440514 CWF19L2Q2TBE0 894 aaKnown RBP23.02■■□□□ 1.28
CPSF4-205ENST00000440514 ARHGAP27Q6ZUM4 889 aa23.02■■□□□ 1.28
CPSF4-205ENST00000440514 CCDC191Q8NCU4 936 aa23.02■■□□□ 1.28
CPSF4-205ENST00000440514 DNAAF4Q8WXU2 420 aa23.02■■□□□ 1.28
CPSF4-205ENST00000440514 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
CPSF4-205ENST00000440514 YY1P25490 414 aa23■■□□□ 1.27
CPSF4-205ENST00000440514 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
CPSF4-205ENST00000440514 NLRP3Q96P20 1036 aa23■■□□□ 1.27
CPSF4-205ENST00000440514 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
CPSF4-205ENST00000440514 NEURL1BA8MQ27 555 aa22.99■■□□□ 1.27
CPSF4-205ENST00000440514 C21orf2O43822 256 aa22.99■■□□□ 1.27
CPSF4-205ENST00000440514 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
CPSF4-205ENST00000440514 ZBTB38Q8NAP3 1195 aaPredicted RBP22.99■■□□□ 1.27
CPSF4-205ENST00000440514 IRS4O14654 1257 aaPredicted RBP22.98■■□□□ 1.27
CPSF4-205ENST00000440514 PCCAP05165 728 aaPredicted RBP22.98■■□□□ 1.27
CPSF4-205ENST00000440514 RASSF7Q02833 373 aa22.98■■□□□ 1.27
CPSF4-205ENST00000440514 ALDH1L2Q3SY69 923 aa22.98■■□□□ 1.27
CPSF4-205ENST00000440514 FER1L6Q2WGJ9 1857 aa22.97■■□□□ 1.27
CPSF4-205ENST00000440514 HOXA10P31260 410 aaPredicted RBP22.97■■□□□ 1.27
CPSF4-205ENST00000440514 COL4A1P02462 1669 aa22.97■■□□□ 1.27
CPSF4-205ENST00000440514 SLC51AQ86UW1 340 aa22.96■■□□□ 1.27
CPSF4-205ENST00000440514 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
CPSF4-205ENST00000440514 RBM17Q96I25 401 aaKnown RBP22.96■■□□□ 1.27
CPSF4-205ENST00000440514 TAF1P21675 1872 aa22.96■■□□□ 1.27
CPSF4-205ENST00000440514 ABCC4O15439 1325 aa22.95■■□□□ 1.26
CPSF4-205ENST00000440514 ALDH1B1P30837 517 aa22.95■■□□□ 1.26
CPSF4-205ENST00000440514 OLFM4Q6UX06 510 aa22.95■■□□□ 1.26
CPSF4-205ENST00000440514 PTPRCP08575 1304 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 NFKBIEO00221 500 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 GCKRQ14397 625 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 BEND3Q5T5X7 828 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 SLC4A10Q6U841 1118 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 C7orf43Q8WVR3 580 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 CRAMP1Q96RY5 1269 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 SBF1O95248 1867 aa22.94■■□□□ 1.26
CPSF4-205ENST00000440514 CDHR2Q9BYE9 1310 aa22.93■■□□□ 1.26
CPSF4-205ENST00000440514 RARSP54136 660 aaKnown RBP22.93■■□□□ 1.26
CPSF4-205ENST00000440514 UBE3BQ7Z3V4 1068 aa22.93■■□□□ 1.26
CPSF4-205ENST00000440514 MYH3P11055 1940 aa22.92■■□□□ 1.26
CPSF4-205ENST00000440514 PPEF1O14829 653 aaPredicted RBP22.92■■□□□ 1.26
CPSF4-205ENST00000440514 TIAM2Q8IVF5 1701 aa22.91■■□□□ 1.26
CPSF4-205ENST00000440514 PRELPP51888 382 aa22.91■■□□□ 1.26
CPSF4-205ENST00000440514 SF3B3Q15393 1217 aaKnown RBP22.91■■□□□ 1.26
CPSF4-205ENST00000440514 CCDC93Q567U6 631 aa22.91■■□□□ 1.26
CPSF4-205ENST00000440514 DDX46Q7L014 1031 aaKnown RBP22.91■■□□□ 1.26
CPSF4-205ENST00000440514 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
CPSF4-205ENST00000440514 H7C1W4 665 aa22.9■■□□□ 1.26
CPSF4-205ENST00000440514 PDE8AO60658 829 aa22.9■■□□□ 1.26
CPSF4-205ENST00000440514 SOGA3Q5TF21 947 aa22.9■■□□□ 1.26
CPSF4-205ENST00000440514 LRRC37AA6NMS7 1700 aa22.89■■□□□ 1.26
CPSF4-205ENST00000440514 CASP7P55210 303 aa22.89■■□□□ 1.25
CPSF4-205ENST00000440514 C9orf131Q5VYM1 1079 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms