RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PNMA5Q96PV4 448 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 ZMYND15Q9H091 742 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 C11orf16Q9NQ32 467 aa6.07□□□□□ -1.44
HMGB3P11-201ENST00000440127 ELOAQ14241 798 aaKnown RBP6.06□□□□□ -1.44
HMGB3P11-201ENST00000440127 GRIN2CQ14957 1233 aa6.06□□□□□ -1.44
HMGB3P11-201ENST00000440127 XP32Q5T750 250 aa6.06□□□□□ -1.44
HMGB3P11-201ENST00000440127 FCHSD1Q86WN1 690 aa6.06□□□□□ -1.44
HMGB3P11-201ENST00000440127 TNFRSF25Q93038 417 aa6.06□□□□□ -1.44
HMGB3P11-201ENST00000440127 SERPINA10Q9UK55 444 aa6.06□□□□□ -1.44
HMGB3P11-201ENST00000440127 NOVA2Q9UNW9 492 aaKnown RBP6.06□□□□□ -1.44
HMGB3P11-201ENST00000440127 ACIN1Q9UKV3 1341 aaKnown RBP6.05□□□□□ -1.44
HMGB3P11-201ENST00000440127 WEE1P30291 646 aa6.05□□□□□ -1.44
HMGB3P11-201ENST00000440127 SNRPNP63162 240 aaKnown RBP6.05□□□□□ -1.44
HMGB3P11-201ENST00000440127 PRRT3Q5FWE3 981 aa6.05□□□□□ -1.44
HMGB3P11-201ENST00000440127 C1orf229Q6ZS94 237 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P11-201ENST00000440127 C7orf43Q8WVR3 580 aa6.05□□□□□ -1.44
HMGB3P11-201ENST00000440127 STRN4Q9NRL3 753 aa6.05□□□□□ -1.44
HMGB3P11-201ENST00000440127 SFSWAPQ12872 951 aaKnown RBP6.04□□□□□ -1.44
HMGB3P11-201ENST00000440127 PLA2G4EQ3MJ16 856 aa6.04□□□□□ -1.44
HMGB3P11-201ENST00000440127 MYO19Q96H55 970 aa6.04□□□□□ -1.44
HMGB3P11-201ENST00000440127 ADAM23O75077 832 aa6.03□□□□□ -1.44
HMGB3P11-201ENST00000440127 ADH7P40394 386 aa6.03□□□□□ -1.44
HMGB3P11-201ENST00000440127 ARSDP51689 593 aa6.03□□□□□ -1.44
HMGB3P11-201ENST00000440127 BHMTQ93088 406 aa6.03□□□□□ -1.44
HMGB3P11-201ENST00000440127 UBE2OQ9C0C9 1292 aaKnown RBP6.03□□□□□ -1.44
HMGB3P11-201ENST00000440127 PRDM6Q9NQX0 595 aa6.03□□□□□ -1.44
HMGB3P11-201ENST00000440127 FAM13BQ9NYF5 915 aa6.03□□□□□ -1.44
HMGB3P11-201ENST00000440127 PTCD1O75127 700 aaKnown RBP6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 ATG7O95352 703 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 SPATA31C1P0DKV0 1188 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 CCINQ13939 588 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 C11orf91Q3C1V1 193 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 LINC00114Q6XXX2 140 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 ZNF280CQ8ND82 737 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 COL26A1Q96A83 441 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 PBXIP1Q96AQ6 731 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 NACC1Q96RE7 527 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 SPOCK3Q9BQ16 436 aa6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P11-201ENST00000440127 IDH3AP50213 366 aa6.01□□□□□ -1.45
HMGB3P11-201ENST00000440127 TBC1D8BQ0IIM8 1120 aa6.01□□□□□ -1.45
HMGB3P11-201ENST00000440127 DGKZQ13574 1117 aa6.01□□□□□ -1.45
HMGB3P11-201ENST00000440127 SLC30A3Q99726 388 aa6.01□□□□□ -1.45
HMGB3P11-201ENST00000440127 KLF15Q9UIH9 416 aa6.01□□□□□ -1.45
HMGB3P11-201ENST00000440127 CCDC180Q9P1Z9 1646 aa6□□□□□ -1.45
HMGB3P11-201ENST00000440127 M0R082 166 aa6□□□□□ -1.45
HMGB3P11-201ENST00000440127 LILRB5O75023 590 aa6□□□□□ -1.45
HMGB3P11-201ENST00000440127 APBA3O96018 575 aa6□□□□□ -1.45
HMGB3P11-201ENST00000440127 ZNF417Q8TAU3 575 aa6□□□□□ -1.45
HMGB3P11-201ENST00000440127 ZNF587Q96SQ5 575 aaPredicted RBP6□□□□□ -1.45
HMGB3P11-201ENST00000440127 MAP3K6O95382 1288 aa5.99□□□□□ -1.45
HMGB3P11-201ENST00000440127 HOXB4P17483 251 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P11-201ENST00000440127 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
HMGB3P11-201ENST00000440127 MDFIQ99750 246 aa5.99□□□□□ -1.45
HMGB3P11-201ENST00000440127 PLVAPQ9BX97 442 aa5.99□□□□□ -1.45
HMGB3P11-201ENST00000440127 QTRT2Q9H974 415 aaKnown RBP5.99□□□□□ -1.45
HMGB3P11-201ENST00000440127 MICAL2O94851 1124 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 NFKB1P19838 968 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 BRD2P25440 801 aaKnown RBP5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 INPP5BP32019 993 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 RAC1P63000 192 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 TRIM28Q13263 835 aaKnown RBP5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 C16orf46Q6P387 395 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 RAB44Q7Z6P3 723 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 HOMEZQ8IX15 550 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 IFT43Q96FT9 208 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 KLK14Q9P0G3 267 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 HCN2Q9UL51 889 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 SLC6A14Q9UN76 642 aa5.98□□□□□ -1.45
HMGB3P11-201ENST00000440127 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 KRBA1A5PL33 1030 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 PRMT3O60678 531 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 COL8A1P27658 744 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 ABTB2Q8N961 1025 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 DCAF11Q8TEB1 546 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 CLP1Q92989 425 aaKnown RBP5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 GSX2Q9BZM3 304 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 RBSNQ9H1K0 784 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 IGFLR1Q9H665 355 aa5.97□□□□□ -1.45
HMGB3P11-201ENST00000440127 K7ELQ4 463 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 LGR5O75473 907 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 PPP1R15AO75807 674 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 RGS9O75916 674 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 ITGB2P05107 769 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 RARAP10276 462 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 FKBP5Q13451 457 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 MICALL1Q8N3F8 863 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 TRIM11Q96F44 468 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 SUV39H2Q9H5I1 410 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 JPH1Q9HDC5 661 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 DNAJB12Q9NXW2 375 aaKnown RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 FRRS1LQ9P0K9 344 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 CXXC1Q9P0U4 656 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 DMGDHQ9UI17 866 aaKnown RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 ZMIZ1Q9ULJ6 1067 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 MTMR7Q9Y216 660 aa5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 FNDC3AQ9Y2H6 1198 aaKnown RBP5.96□□□□□ -1.46
HMGB3P11-201ENST00000440127 ALBP02768 609 aa5.95□□□□□ -1.46
HMGB3P11-201ENST00000440127 PROCP04070 461 aa5.95□□□□□ -1.46
HMGB3P11-201ENST00000440127 TRAPPC3LQ5T215 181 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms