RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 CREB3L3Q68CJ9 461 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
STRC-203ENST00000440125 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
STRC-203ENST00000440125 HAND2P61296 217 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.15□□□□□ -0.3
STRC-203ENST00000440125 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
STRC-203ENST00000440125 CEP135Q66GS9 1140 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 XBP1P17861 261 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
STRC-203ENST00000440125 SGSM2O43147 1006 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 HMGB1P09429 215 aaKnown RBP13.14□□□□□ -0.31
STRC-203ENST00000440125 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
STRC-203ENST00000440125 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 CGNQ9P2M7 1197 aaKnown RBP13.14□□□□□ -0.31
STRC-203ENST00000440125 SKILP12757 684 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 PPFIBP1Q86W92 1011 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 KIF2AO00139 706 aaPredicted RBP13.14□□□□□ -0.31
STRC-203ENST00000440125 GRM8O00222 908 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
STRC-203ENST00000440125 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
STRC-203ENST00000440125 Q6ZUG5 572 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 CCDC82Q8N4S0 544 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
STRC-203ENST00000440125 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
STRC-203ENST00000440125 SKIDA1Q1XH10 827 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 FLT4P35916 1363 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 CCDC69A6NI79 296 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 NEMFO60524 1076 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 TRPM2O94759 1503 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 NBPF7P0C2Y1 421 aaPredicted RBP13.13□□□□□ -0.31
STRC-203ENST00000440125 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
STRC-203ENST00000440125 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 CCDC47Q96A33 483 aaKnown RBP13.13□□□□□ -0.31
STRC-203ENST00000440125 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 ZSCAN16Q9H4T2 348 aaPredicted RBP13.13□□□□□ -0.31
STRC-203ENST00000440125 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
STRC-203ENST00000440125 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 EDC4Q6P2E9 1401 aaKnown RBP13.12□□□□□ -0.31
STRC-203ENST00000440125 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
STRC-203ENST00000440125 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
STRC-203ENST00000440125 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 TMEM2Q9UHN6 1383 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 CDKL5O76039 1030 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 PIBF1Q8WXW3 757 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 LRRC59Q96AG4 307 aaKnown RBP13.12□□□□□ -0.31
STRC-203ENST00000440125 ACBD3Q9H3P7 528 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 CCDC171Q6TFL3 1326 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 RAD50Q92878 1312 aa13.12□□□□□ -0.31
STRC-203ENST00000440125 ALDH1L1O75891 902 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 HSPA4P34932 840 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
STRC-203ENST00000440125 COPS6Q7L5N1 327 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 CLSTN1O94985 981 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 CAVIN2O95810 425 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 PDE4CQ08493 712 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 TOM1L2Q6ZVM7 507 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
STRC-203ENST00000440125 TOP1P11387 765 aaKnown RBP13.11□□□□□ -0.31
STRC-203ENST00000440125 SMARCE1Q969G3 411 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 PRDM11Q9NQV5 511 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 TBX22Q9Y458 520 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
STRC-203ENST00000440125 POLR3GO15318 223 aaPredicted RBP13.1□□□□□ -0.31
STRC-203ENST00000440125 GSDMDP57764 484 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
STRC-203ENST00000440125 KLHL10Q6JEL2 608 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 AOPEPQ8N6M6 819 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 NAP1L1P55209 391 aaKnown RBP13.1□□□□□ -0.31
STRC-203ENST00000440125 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 CHST3Q7LGC8 479 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 TRERF1Q96PN7 1200 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 UNC5CLQ8IV45 518 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 DACH1Q9UI36 760 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 TERF1P54274 439 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 METTL24Q5JXM2 366 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
STRC-203ENST00000440125 ZNF213O14771 459 aa13.09□□□□□ -0.31
STRC-203ENST00000440125 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
STRC-203ENST00000440125 MYRIPQ8NFW9 859 aa13.09□□□□□ -0.31
STRC-203ENST00000440125 NSFL1CQ9UNZ2 370 aaKnown RBP13.09□□□□□ -0.31
STRC-203ENST00000440125 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms