RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 APAF1O14727 1248 aa9.83□□□□□ -0.84
COPS3-203ENST00000439936 PTCD1O75127 700 aaKnown RBP9.83□□□□□ -0.84
COPS3-203ENST00000439936 SIK1P57059 783 aa9.83□□□□□ -0.84
COPS3-203ENST00000439936 TSR1Q2NL82 804 aaKnown RBP9.83□□□□□ -0.84
COPS3-203ENST00000439936 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
COPS3-203ENST00000439936 NUP188Q5SRE5 1749 aa9.83□□□□□ -0.84
COPS3-203ENST00000439936 KCNQ3O43525 872 aa9.82□□□□□ -0.84
COPS3-203ENST00000439936 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
COPS3-203ENST00000439936 TAF7Q15545 349 aaPredicted RBP9.82□□□□□ -0.84
COPS3-203ENST00000439936 SLC15A2Q16348 729 aa9.82□□□□□ -0.84
COPS3-203ENST00000439936 THUMPD2Q9BTF0 503 aaKnown RBP9.82□□□□□ -0.84
COPS3-203ENST00000439936 BTBD11A6QL63 1104 aa9.81□□□□□ -0.84
COPS3-203ENST00000439936 ITPK1Q13572 414 aa9.81□□□□□ -0.84
COPS3-203ENST00000439936 ZNF790Q6PG37 636 aa9.81□□□□□ -0.84
COPS3-203ENST00000439936 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
COPS3-203ENST00000439936 MIS18AQ9NYP9 233 aa9.81□□□□□ -0.84
COPS3-203ENST00000439936 TAF1LQ8IZX4 1826 aa9.81□□□□□ -0.84
COPS3-203ENST00000439936 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
COPS3-203ENST00000439936 SENP3-EIF4A1A0A087X0R7 540 aa9.8□□□□□ -0.84
COPS3-203ENST00000439936 CCER2I3L3R5 266 aa9.8□□□□□ -0.84
COPS3-203ENST00000439936 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
COPS3-203ENST00000439936 ZNF827Q17R98 1081 aa9.8□□□□□ -0.84
COPS3-203ENST00000439936 KIAA1468Q9P260 1216 aa9.8□□□□□ -0.84
COPS3-203ENST00000439936 MRC1P22897 1456 aa9.79□□□□□ -0.84
COPS3-203ENST00000439936 TTC5Q8N0Z6 440 aa9.79□□□□□ -0.84
COPS3-203ENST00000439936 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
COPS3-203ENST00000439936 ZNF496Q96IT1 587 aaPredicted RBP9.79□□□□□ -0.84
COPS3-203ENST00000439936 PDGFDQ9GZP0 370 aaPredicted RBP9.79□□□□□ -0.84
COPS3-203ENST00000439936 SOWAHBA6NEL2 793 aa9.78□□□□□ -0.84
COPS3-203ENST00000439936 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
COPS3-203ENST00000439936 LMOD3Q0VAK6 560 aa9.78□□□□□ -0.84
COPS3-203ENST00000439936 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
COPS3-203ENST00000439936 SMYD5Q6GMV2 418 aa9.78□□□□□ -0.84
COPS3-203ENST00000439936 SMIM5Q71RC9 77 aa9.78□□□□□ -0.84
COPS3-203ENST00000439936 DNAJC10Q8IXB1 793 aa9.78□□□□□ -0.84
COPS3-203ENST00000439936 TFCP2L1Q9NZI6 479 aa9.78□□□□□ -0.84
COPS3-203ENST00000439936 MYH14Q7Z406 1995 aaKnown RBP9.78□□□□□ -0.84
COPS3-203ENST00000439936 OSBPP22059 807 aa9.77□□□□□ -0.84
COPS3-203ENST00000439936 LAPTM4AQ15012 233 aa9.77□□□□□ -0.84
COPS3-203ENST00000439936 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.84
COPS3-203ENST00000439936 ZNF831Q5JPB2 1677 aa9.77□□□□□ -0.85
COPS3-203ENST00000439936 TRIM6-TRIM34B2RNG4 842 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 CHL1O00533 1208 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 CYP19A1P11511 503 aaPredicted RBP9.76□□□□□ -0.85
COPS3-203ENST00000439936 Q6ZNB5 142 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 AMIGO3Q86WK7 504 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 COL23A1Q86Y22 540 aaPredicted RBP9.76□□□□□ -0.85
COPS3-203ENST00000439936 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 SEPT9Q9UHD8 586 aaPredicted RBP9.76□□□□□ -0.85
COPS3-203ENST00000439936 SALL2Q9Y467 1007 aaPredicted RBP9.76□□□□□ -0.85
COPS3-203ENST00000439936 USP16Q9Y5T5 823 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 PAPPAQ13219 1627 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 C5P01031 1676 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 HEG1Q9ULI3 1381 aa9.76□□□□□ -0.85
COPS3-203ENST00000439936 PRAMEF22A3QJZ6 481 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 MAP3K7O43318 606 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 RPS6KA4O75676 772 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 CRKLP46109 303 aaKnown RBP9.75□□□□□ -0.85
COPS3-203ENST00000439936 EIF4A1P60842 406 aaKnown RBP9.75□□□□□ -0.85
COPS3-203ENST00000439936 KCNC4Q03721 635 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 INTS5Q6P9B9 1019 aaKnown RBP9.75□□□□□ -0.85
COPS3-203ENST00000439936 AK7Q96M32 723 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 TEX13AQ9BXU3 409 aaPredicted RBP9.75□□□□□ -0.85
COPS3-203ENST00000439936 BABAM1Q9NWV8 329 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 LAS1LQ9Y4W2 734 aaKnown RBP9.75□□□□□ -0.85
COPS3-203ENST00000439936 C4BP0C0L5 1744 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 KCPQ6ZWJ8 1503 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 PNPLA7Q6ZV29 1317 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 UBR2Q8IWV8 1755 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 TULP1O00294 542 aaPredicted RBP9.75□□□□□ -0.85
COPS3-203ENST00000439936 SNRPA1P09661 255 aaKnown RBP9.75□□□□□ -0.85
COPS3-203ENST00000439936 CCDC27Q2M243 656 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 FLAD1Q8NFF5 587 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 FAM198AQ9UFP1 575 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 TSPYL4Q9UJ04 414 aa9.75□□□□□ -0.85
COPS3-203ENST00000439936 TUBGCP6Q96RT7 1819 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 TJP1Q07157 1748 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 GNPATO15228 680 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 STARD3NLO95772 234 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 A1BGP04217 495 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 ZNF853P0CG23 659 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 BCAMP50895 628 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 CCDC87Q9NVE4 849 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 RTCBQ9Y3I0 505 aaKnown RBP9.74□□□□□ -0.85
COPS3-203ENST00000439936 UBR3Q6ZT12 1888 aa9.74□□□□□ -0.85
COPS3-203ENST00000439936 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
COPS3-203ENST00000439936 COL5A3P25940 1745 aaPredicted RBP9.73□□□□□ -0.85
COPS3-203ENST00000439936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
COPS3-203ENST00000439936 GIGYF1O75420 1035 aaPredicted RBP9.73□□□□□ -0.85
COPS3-203ENST00000439936 ZBTB7AO95365 584 aa9.73□□□□□ -0.85
COPS3-203ENST00000439936 SSFA2P28290 1259 aa9.73□□□□□ -0.85
COPS3-203ENST00000439936 GNAI1P63096 354 aa9.73□□□□□ -0.85
COPS3-203ENST00000439936 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
COPS3-203ENST00000439936 ZFRQ96KR1 1074 aaKnown RBP9.73□□□□□ -0.85
COPS3-203ENST00000439936 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms