RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 COPS6Q7L5N1 327 aa21.21■□□□□ 0.99
SNRPD3-204ENST00000439775 XAGE3Q8WTP9 111 aa21.21■□□□□ 0.99
SNRPD3-204ENST00000439775 NECTIN2Q92692 538 aa21.21■□□□□ 0.99
SNRPD3-204ENST00000439775 ANKRD36CQ5JPF3 1778 aa21.2■□□□□ 0.99
SNRPD3-204ENST00000439775 APAF1O14727 1248 aa21.2■□□□□ 0.98
SNRPD3-204ENST00000439775 HDGFL1Q5TGJ6 251 aa21.2■□□□□ 0.98
SNRPD3-204ENST00000439775 SMC1BQ8NDV3 1235 aa21.2■□□□□ 0.98
SNRPD3-204ENST00000439775 RPGRQ92834 1020 aaKnown RBP21.2■□□□□ 0.98
SNRPD3-204ENST00000439775 CHPF2Q9P2E5 772 aa21.2■□□□□ 0.98
SNRPD3-204ENST00000439775 ZNF853P0CG23 659 aa21.19■□□□□ 0.98
SNRPD3-204ENST00000439775 CALD1Q05682 793 aaKnown RBP21.19■□□□□ 0.98
SNRPD3-204ENST00000439775 UTP14AQ9BVJ6 771 aaKnown RBP21.19■□□□□ 0.98
SNRPD3-204ENST00000439775 MBIPQ9NS73 344 aa21.19■□□□□ 0.98
SNRPD3-204ENST00000439775 POTECB2RU33 542 aa21.18■□□□□ 0.98
SNRPD3-204ENST00000439775 AIMP1Q12904 312 aaKnown RBP21.18■□□□□ 0.98
SNRPD3-204ENST00000439775 CC2D2BQ6DHV5 1058 aa21.18■□□□□ 0.98
SNRPD3-204ENST00000439775 OLFM4Q6UX06 510 aa21.18■□□□□ 0.98
SNRPD3-204ENST00000439775 IFT57Q9NWB7 429 aa21.18■□□□□ 0.98
SNRPD3-204ENST00000439775 DBF4Q9UBU7 674 aaPredicted RBP21.18■□□□□ 0.98
SNRPD3-204ENST00000439775 SLC10A5Q5PT55 438 aa21.17■□□□□ 0.98
SNRPD3-204ENST00000439775 RBM17Q96I25 401 aaKnown RBP21.17■□□□□ 0.98
SNRPD3-204ENST00000439775 CRAMP1Q96RY5 1269 aa21.17■□□□□ 0.98
SNRPD3-204ENST00000439775 PSMD1Q99460 953 aa21.17■□□□□ 0.98
SNRPD3-204ENST00000439775 TCIRG1Q13488 830 aa21.16■□□□□ 0.98
SNRPD3-204ENST00000439775 GRIPAP1Q4V328 841 aa21.16■□□□□ 0.98
SNRPD3-204ENST00000439775 DUSP27Q5VZP5 1158 aa21.16■□□□□ 0.98
SNRPD3-204ENST00000439775 NLRP10Q86W26 655 aa21.16■□□□□ 0.98
SNRPD3-204ENST00000439775 ZNF277Q9NRM2 450 aaPredicted RBP21.16■□□□□ 0.98
SNRPD3-204ENST00000439775 GNAI1P63096 354 aa21.15■□□□□ 0.98
SNRPD3-204ENST00000439775 C3orf67Q6ZVT6 689 aa21.15■□□□□ 0.98
SNRPD3-204ENST00000439775 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
SNRPD3-204ENST00000439775 PLBD2Q8NHP8 589 aa21.14■□□□□ 0.97
SNRPD3-204ENST00000439775 L3MBTL3Q96JM7 780 aaPredicted RBP21.14■□□□□ 0.97
SNRPD3-204ENST00000439775 HYPKQ9NX55 129 aa21.14■□□□□ 0.97
SNRPD3-204ENST00000439775 PPEF1O14829 653 aaPredicted RBP21.13■□□□□ 0.97
SNRPD3-204ENST00000439775 DDNO94850 711 aaPredicted RBP21.13■□□□□ 0.97
SNRPD3-204ENST00000439775 IARSP41252 1262 aaKnown RBP21.13■□□□□ 0.97
SNRPD3-204ENST00000439775 SYNE4Q8N205 404 aa21.13■□□□□ 0.97
SNRPD3-204ENST00000439775 DNAJC5GQ8N7S2 189 aa21.13■□□□□ 0.97
SNRPD3-204ENST00000439775 SH3TC1Q8TE82 1336 aa21.12■□□□□ 0.97
SNRPD3-204ENST00000439775 IQCA1LA6NCM1 817 aa21.11■□□□□ 0.97
SNRPD3-204ENST00000439775 CCDC184Q52MB2 194 aa21.11■□□□□ 0.97
SNRPD3-204ENST00000439775 ANKRD13DQ6ZTN6 518 aa21.11■□□□□ 0.97
SNRPD3-204ENST00000439775 TRMT112Q9UI30 125 aaKnown RBP21.11■□□□□ 0.97
SNRPD3-204ENST00000439775 ZNF541Q9H0D2 1346 aa21.1■□□□□ 0.97
SNRPD3-204ENST00000439775 FZD9O00144 591 aa21.1■□□□□ 0.97
SNRPD3-204ENST00000439775 LAMB2P55268 1798 aa21.1■□□□□ 0.97
SNRPD3-204ENST00000439775 ABCC4O15439 1325 aa21.09■□□□□ 0.97
SNRPD3-204ENST00000439775 CCDC27Q2M243 656 aa21.09■□□□□ 0.97
SNRPD3-204ENST00000439775 ISCA1Q9BUE6 129 aa21.09■□□□□ 0.97
SNRPD3-204ENST00000439775 SCN4AP35499 1836 aa21.08■□□□□ 0.97
SNRPD3-204ENST00000439775 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.97
SNRPD3-204ENST00000439775 HCLS1P14317 486 aaPredicted RBP21.08■□□□□ 0.97
SNRPD3-204ENST00000439775 JDP2Q8WYK2 163 aa21.08■□□□□ 0.97
SNRPD3-204ENST00000439775 ATP6V0A2Q9Y487 856 aa21.08■□□□□ 0.97
SNRPD3-204ENST00000439775 COL4A5P29400 1685 aa21.08■□□□□ 0.96
SNRPD3-204ENST00000439775 CHMP4AQ9BY43 222 aa21.07■□□□□ 0.96
SNRPD3-204ENST00000439775 BBOX1O75936 387 aa21.06■□□□□ 0.96
SNRPD3-204ENST00000439775 TRIM28Q13263 835 aaKnown RBP21.06■□□□□ 0.96
SNRPD3-204ENST00000439775 SLC51AQ86UW1 340 aa21.06■□□□□ 0.96
SNRPD3-204ENST00000439775 KLRG1Q96E93 195 aa21.06■□□□□ 0.96
SNRPD3-204ENST00000439775 TMX4Q9H1E5 349 aaPredicted RBP21.06■□□□□ 0.96
SNRPD3-204ENST00000439775 DDX60Q8IY21 1712 aaKnown RBP21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 ANP32CO43423 234 aa21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 HTRA3P83110 453 aa21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 GOLGA2Q08379 1002 aa21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 CHADLQ6NUI6 762 aa21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 GPC2Q8N158 579 aa21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 C8orf58Q8NAV2 365 aa21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 VPS33BQ9H267 617 aa21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 TAF1DQ9H5J8 278 aaPredicted RBP21.05■□□□□ 0.96
SNRPD3-204ENST00000439775 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
SNRPD3-204ENST00000439775 TCERG1O14776 1098 aaKnown RBP21.04■□□□□ 0.96
SNRPD3-204ENST00000439775 GRAPQ13588 217 aa21.04■□□□□ 0.96
SNRPD3-204ENST00000439775 DDX46Q7L014 1031 aaKnown RBP21.04■□□□□ 0.96
SNRPD3-204ENST00000439775 GRAPLQ8TC17 118 aaPredicted RBP21.04■□□□□ 0.96
SNRPD3-204ENST00000439775 MRS2Q9HD23 443 aa21.04■□□□□ 0.96
SNRPD3-204ENST00000439775 HACL1Q9UJ83 578 aa21.04■□□□□ 0.96
SNRPD3-204ENST00000439775 ATP5J2-PTCD1G3V325 749 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 POTEIP0CG38 1075 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 POTEJP0CG39 1038 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 CCDC30Q5VVM6 783 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 TMC4Q7Z404 712 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 RIC3Q7Z5B4 369 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 LDHDQ86WU2 507 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 WWC1Q8IX03 1113 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 SP8Q8IXZ3 490 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 LARGE2Q8N3Y3 721 aa21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 RTFDC1Q9BY42 306 aaPredicted RBP21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 PHAXQ9H814 394 aaKnown RBP21.03■□□□□ 0.96
SNRPD3-204ENST00000439775 EIF6P56537 245 aaKnown RBP21.02■□□□□ 0.96
SNRPD3-204ENST00000439775 SUPT20HQ8NEM7 779 aa21.02■□□□□ 0.96
SNRPD3-204ENST00000439775 FAM89AQ96GI7 184 aa21.02■□□□□ 0.96
SNRPD3-204ENST00000439775 IL16Q14005 1332 aa21.02■□□□□ 0.95
SNRPD3-204ENST00000439775 LRRC37AA6NMS7 1700 aa21.01■□□□□ 0.95
SNRPD3-204ENST00000439775 ADAMTSL1Q8N6G6 1762 aa21.01■□□□□ 0.95
SNRPD3-204ENST00000439775 SF3B3Q15393 1217 aaKnown RBP21.01■□□□□ 0.95
SNRPD3-204ENST00000439775 JMYQ8N9B5 988 aa21.01■□□□□ 0.95
SNRPD3-204ENST00000439775 PPIP5K2O43314 1243 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms