RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 TMX4Q9H1E5 349 aaPredicted RBP24.43■■□□□ 1.5
CCDC78-204ENST00000439619 DBF4Q9UBU7 674 aaPredicted RBP24.43■■□□□ 1.5
CCDC78-204ENST00000439619 GNAI1P63096 354 aa24.42■■□□□ 1.5
CCDC78-204ENST00000439619 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
CCDC78-204ENST00000439619 CHMP4AQ9BY43 222 aa24.42■■□□□ 1.5
CCDC78-204ENST00000439619 SLX4Q8IY92 1834 aa24.41■■□□□ 1.5
CCDC78-204ENST00000439619 HOXA10P31260 410 aaPredicted RBP24.41■■□□□ 1.5
CCDC78-204ENST00000439619 KRT24Q2M2I5 525 aa24.41■■□□□ 1.5
CCDC78-204ENST00000439619 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
CCDC78-204ENST00000439619 CHPF2Q9P2E5 772 aa24.41■■□□□ 1.5
CCDC78-204ENST00000439619 DUSP27Q5VZP5 1158 aa24.4■■□□□ 1.5
CCDC78-204ENST00000439619 CRAMP1Q96RY5 1269 aa24.4■■□□□ 1.5
CCDC78-204ENST00000439619 MBIPQ9NS73 344 aa24.4■■□□□ 1.5
CCDC78-204ENST00000439619 HYPKQ9NX55 129 aa24.4■■□□□ 1.5
CCDC78-204ENST00000439619 ARFGEF2Q9Y6D5 1785 aa24.39■■□□□ 1.5
CCDC78-204ENST00000439619 TIAM2Q8IVF5 1701 aa24.39■■□□□ 1.5
CCDC78-204ENST00000439619 TCIRG1Q13488 830 aa24.39■■□□□ 1.49
CCDC78-204ENST00000439619 NUP98P52948 1817 aa24.39■■□□□ 1.49
CCDC78-204ENST00000439619 FER1L6Q2WGJ9 1857 aa24.38■■□□□ 1.49
CCDC78-204ENST00000439619 ZNF277Q9NRM2 450 aaPredicted RBP24.38■■□□□ 1.49
CCDC78-204ENST00000439619 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
CCDC78-204ENST00000439619 ANP32CO43423 234 aa24.37■■□□□ 1.49
CCDC78-204ENST00000439619 SLC10A5Q5PT55 438 aa24.37■■□□□ 1.49
CCDC78-204ENST00000439619 ANKRD13DQ6ZTN6 518 aa24.37■■□□□ 1.49
CCDC78-204ENST00000439619 PLBD2Q8NHP8 589 aa24.37■■□□□ 1.49
CCDC78-204ENST00000439619 TRMT112Q9UI30 125 aaKnown RBP24.37■■□□□ 1.49
CCDC78-204ENST00000439619 IQCA1LA6NCM1 817 aa24.36■■□□□ 1.49
CCDC78-204ENST00000439619 PPEF1O14829 653 aaPredicted RBP24.36■■□□□ 1.49
CCDC78-204ENST00000439619 ZNF853P0CG23 659 aa24.36■■□□□ 1.49
CCDC78-204ENST00000439619 NLRP10Q86W26 655 aa24.36■■□□□ 1.49
CCDC78-204ENST00000439619 SYNE4Q8N205 404 aa24.36■■□□□ 1.49
CCDC78-204ENST00000439619 JDP2Q8WYK2 163 aa24.36■■□□□ 1.49
CCDC78-204ENST00000439619 PSMD1Q99460 953 aa24.36■■□□□ 1.49
CCDC78-204ENST00000439619 IARSP41252 1262 aaKnown RBP24.35■■□□□ 1.49
CCDC78-204ENST00000439619 OLFM4Q6UX06 510 aa24.35■■□□□ 1.49
CCDC78-204ENST00000439619 SH3TC1Q8TE82 1336 aa24.35■■□□□ 1.49
CCDC78-204ENST00000439619 DDNO94850 711 aaPredicted RBP24.34■■□□□ 1.49
CCDC78-204ENST00000439619 CEP350Q5VT06 3117 aa24.34■■□□□ 1.49
CCDC78-204ENST00000439619 CACNA1SQ13698 1873 aa24.33■■□□□ 1.49
CCDC78-204ENST00000439619 GOLGA2Q08379 1002 aa24.32■■□□□ 1.48
CCDC78-204ENST00000439619 DDX46Q7L014 1031 aaKnown RBP24.31■■□□□ 1.48
CCDC78-204ENST00000439619 MRS2Q9HD23 443 aa24.31■■□□□ 1.48
CCDC78-204ENST00000439619 WDR90Q96KV7 1748 aa24.3■■□□□ 1.48
CCDC78-204ENST00000439619 POTECB2RU33 542 aa24.3■■□□□ 1.48
CCDC78-204ENST00000439619 ELL2O00472 640 aaPredicted RBP24.3■■□□□ 1.48
CCDC78-204ENST00000439619 TCERG1O14776 1098 aaKnown RBP24.3■■□□□ 1.48
CCDC78-204ENST00000439619 BBOX1O75936 387 aa24.3■■□□□ 1.48
CCDC78-204ENST00000439619 HCLS1P14317 486 aaPredicted RBP24.3■■□□□ 1.48
CCDC78-204ENST00000439619 RIC3Q7Z5B4 369 aa24.3■■□□□ 1.48
CCDC78-204ENST00000439619 CCDC88AQ3V6T2 1871 aa24.3■■□□□ 1.48
CCDC78-204ENST00000439619 C3orf67Q6ZVT6 689 aa24.29■■□□□ 1.48
CCDC78-204ENST00000439619 L3MBTL3Q96JM7 780 aaPredicted RBP24.29■■□□□ 1.48
CCDC78-204ENST00000439619 ATP6V0A2Q9Y487 856 aa24.29■■□□□ 1.48
CCDC78-204ENST00000439619 DICER1Q9UPY3 1922 aaKnown RBP24.28■■□□□ 1.48
CCDC78-204ENST00000439619 EIF6P56537 245 aaKnown RBP24.28■■□□□ 1.48
CCDC78-204ENST00000439619 CCDC27Q2M243 656 aa24.28■■□□□ 1.48
CCDC78-204ENST00000439619 CCDC30Q5VVM6 783 aa24.28■■□□□ 1.48
CCDC78-204ENST00000439619 LARGE2Q8N3Y3 721 aa24.28■■□□□ 1.48
CCDC78-204ENST00000439619 SUPT20HQ8NEM7 779 aa24.28■■□□□ 1.48
CCDC78-204ENST00000439619 FZD9O00144 591 aa24.27■■□□□ 1.48
CCDC78-204ENST00000439619 DDX58O95786 925 aaKnown RBP24.27■■□□□ 1.48
CCDC78-204ENST00000439619 HSP90B1P14625 803 aaKnown RBP24.27■■□□□ 1.48
CCDC78-204ENST00000439619 ISCA1Q9BUE6 129 aa24.27■■□□□ 1.48
CCDC78-204ENST00000439619 ABCC4O15439 1325 aa24.27■■□□□ 1.48
CCDC78-204ENST00000439619 ATP5J2-PTCD1G3V325 749 aa24.26■■□□□ 1.47
CCDC78-204ENST00000439619 CCDC184Q52MB2 194 aa24.26■■□□□ 1.47
CCDC78-204ENST00000439619 CHADLQ6NUI6 762 aa24.26■■□□□ 1.47
CCDC78-204ENST00000439619 TMC4Q7Z404 712 aa24.26■■□□□ 1.47
CCDC78-204ENST00000439619 GPC2Q8N158 579 aa24.26■■□□□ 1.47
CCDC78-204ENST00000439619 VPS33BQ9H267 617 aa24.26■■□□□ 1.47
CCDC78-204ENST00000439619 HACL1Q9UJ83 578 aa24.26■■□□□ 1.47
CCDC78-204ENST00000439619 TRIM28Q13263 835 aaKnown RBP24.25■■□□□ 1.47
CCDC78-204ENST00000439619 DNAJC5GQ8N7S2 189 aa24.25■■□□□ 1.47
CCDC78-204ENST00000439619 ZNF541Q9H0D2 1346 aa24.25■■□□□ 1.47
CCDC78-204ENST00000439619 GRAPQ13588 217 aa24.24■■□□□ 1.47
CCDC78-204ENST00000439619 NCBP3Q53F19 620 aaKnown RBP24.24■■□□□ 1.47
CCDC78-204ENST00000439619 SP8Q8IXZ3 490 aa24.24■■□□□ 1.47
CCDC78-204ENST00000439619 NIM1KQ8IY84 436 aa24.24■■□□□ 1.47
CCDC78-204ENST00000439619 C8orf58Q8NAV2 365 aa24.24■■□□□ 1.47
CCDC78-204ENST00000439619 GRAPLQ8TC17 118 aaPredicted RBP24.24■■□□□ 1.47
CCDC78-204ENST00000439619 SNED1Q8TER0 1413 aa24.24■■□□□ 1.47
CCDC78-204ENST00000439619 PPIP5K2O43314 1243 aa24.23■■□□□ 1.47
CCDC78-204ENST00000439619 DPP8Q6V1X1 898 aaPredicted RBP24.23■■□□□ 1.47
CCDC78-204ENST00000439619 PNMA8AQ86V59 439 aaPredicted RBP24.23■■□□□ 1.47
CCDC78-204ENST00000439619 LDHDQ86WU2 507 aa24.23■■□□□ 1.47
CCDC78-204ENST00000439619 KLRG1Q96E93 195 aa24.23■■□□□ 1.47
CCDC78-204ENST00000439619 FAM89AQ96GI7 184 aa24.23■■□□□ 1.47
CCDC78-204ENST00000439619 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
CCDC78-204ENST00000439619 TAF1DQ9H5J8 278 aaPredicted RBP24.23■■□□□ 1.47
CCDC78-204ENST00000439619 ANKRD36CQ5JPF3 1778 aa24.23■■□□□ 1.47
CCDC78-204ENST00000439619 WWC1Q8IX03 1113 aa24.22■■□□□ 1.47
CCDC78-204ENST00000439619 PHAXQ9H814 394 aaKnown RBP24.22■■□□□ 1.47
CCDC78-204ENST00000439619 GJA3Q9Y6H8 435 aa24.22■■□□□ 1.47
CCDC78-204ENST00000439619 LMOD1P29536 600 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-204ENST00000439619 HTRA3P83110 453 aa24.21■■□□□ 1.47
CCDC78-204ENST00000439619 EAPPQ56P03 285 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-204ENST00000439619 MPNDQ8N594 471 aa24.21■■□□□ 1.47
CCDC78-204ENST00000439619 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
CCDC78-204ENST00000439619 IL16Q14005 1332 aa24.2■■□□□ 1.46
CCDC78-204ENST00000439619 EPHX2P34913 555 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms