RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
LMO3-207ENST00000439600 DCTN1Q14203 1278 aa14.05□□□□□ -0.16
LMO3-207ENST00000439600 VARS2Q5ST30 1063 aaKnown RBP14.05□□□□□ -0.16
LMO3-207ENST00000439600 NFATC2IPQ8NCF5 419 aa14.05□□□□□ -0.16
LMO3-207ENST00000439600 CHMP4AQ9BY43 222 aa14.05□□□□□ -0.16
LMO3-207ENST00000439600 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
LMO3-207ENST00000439600 KIAA1468Q9P260 1216 aa14.05□□□□□ -0.16
LMO3-207ENST00000439600 RABGEF1Q9UJ41 708 aa14.05□□□□□ -0.16
LMO3-207ENST00000439600 BCL9O00512 1426 aa14.05□□□□□ -0.16
LMO3-207ENST00000439600 BTBD11A6QL63 1104 aa14.04□□□□□ -0.16
LMO3-207ENST00000439600 CHL1O00533 1208 aa14.04□□□□□ -0.16
LMO3-207ENST00000439600 LAS1LQ9Y4W2 734 aaKnown RBP14.04□□□□□ -0.16
LMO3-207ENST00000439600 SENP3-EIF4A1A0A087X0R7 540 aa14.03□□□□□ -0.16
LMO3-207ENST00000439600 CLK2P49760 499 aaKnown RBP14.03□□□□□ -0.16
LMO3-207ENST00000439600 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
LMO3-207ENST00000439600 RGPD2P0DJD1 1756 aa14.02□□□□□ -0.16
LMO3-207ENST00000439600 ZNF853P0CG23 659 aa14.02□□□□□ -0.17
LMO3-207ENST00000439600 PSEN2P49810 448 aa14.02□□□□□ -0.17
LMO3-207ENST00000439600 SLFN5Q08AF3 891 aa14.02□□□□□ -0.17
LMO3-207ENST00000439600 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.17
LMO3-207ENST00000439600 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
LMO3-207ENST00000439600 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.17
LMO3-207ENST00000439600 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.02□□□□□ -0.17
LMO3-207ENST00000439600 POLR3EQ9NVU0 708 aa14.02□□□□□ -0.17
LMO3-207ENST00000439600 TSPYL4Q9UJ04 414 aa14.02□□□□□ -0.17
LMO3-207ENST00000439600 DDX11L8A8MPP1 907 aa14.01□□□□□ -0.17
LMO3-207ENST00000439600 ST18O60284 1047 aa14.01□□□□□ -0.17
LMO3-207ENST00000439600 EMP3P54852 163 aa14.01□□□□□ -0.17
LMO3-207ENST00000439600 TUSC1Q2TAM9 212 aa14.01□□□□□ -0.17
LMO3-207ENST00000439600 THSD7AQ9UPZ6 1657 aa14.01□□□□□ -0.17
LMO3-207ENST00000439600 GJA5P36382 358 aa14□□□□□ -0.17
LMO3-207ENST00000439600 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
LMO3-207ENST00000439600 ACSBG1Q96GR2 724 aa14□□□□□ -0.17
LMO3-207ENST00000439600 KDM6AO15550 1401 aaPredicted RBP13.99□□□□□ -0.17
LMO3-207ENST00000439600 PKD1L3Q7Z443 1732 aa13.99□□□□□ -0.17
LMO3-207ENST00000439600 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
LMO3-207ENST00000439600 TRMT2AQ8IZ69 625 aaKnown RBP13.99□□□□□ -0.17
LMO3-207ENST00000439600 PROCA1Q8NCQ7 364 aaPredicted RBP13.99□□□□□ -0.17
LMO3-207ENST00000439600 SPIRE2Q8WWL2 714 aa13.99□□□□□ -0.17
LMO3-207ENST00000439600 PIGBQ92521 554 aa13.99□□□□□ -0.17
LMO3-207ENST00000439600 SOS1Q07889 1333 aaPredicted RBP13.98□□□□□ -0.17
LMO3-207ENST00000439600 SMAPO00193 183 aa13.98□□□□□ -0.17
LMO3-207ENST00000439600 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
LMO3-207ENST00000439600 CCDC125Q86Z20 511 aa13.98□□□□□ -0.17
LMO3-207ENST00000439600 ZNF687Q8N1G0 1237 aa13.98□□□□□ -0.17
LMO3-207ENST00000439600 TEX13AQ9BXU3 409 aaPredicted RBP13.98□□□□□ -0.17
LMO3-207ENST00000439600 MBIPQ9NS73 344 aa13.98□□□□□ -0.17
LMO3-207ENST00000439600 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
LMO3-207ENST00000439600 FMNL2Q96PY5 1086 aa13.97□□□□□ -0.17
LMO3-207ENST00000439600 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
LMO3-207ENST00000439600 LRRC37A3O60309 1634 aa13.97□□□□□ -0.17
LMO3-207ENST00000439600 KCNQ2O43526 872 aa13.96□□□□□ -0.17
LMO3-207ENST00000439600 SLC4A3P48751 1232 aa13.96□□□□□ -0.17
LMO3-207ENST00000439600 SF3B2Q13435 895 aaKnown RBP13.96□□□□□ -0.17
LMO3-207ENST00000439600 RIC3Q7Z5B4 369 aa13.96□□□□□ -0.17
LMO3-207ENST00000439600 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
LMO3-207ENST00000439600 LRP5O75197 1615 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 SPTLC1O15269 473 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 HOXB7P09629 217 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 EIF4A1P60842 406 aaKnown RBP13.95□□□□□ -0.18
LMO3-207ENST00000439600 USP46P62068 366 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 DUSP27Q5VZP5 1158 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 ATG3Q9NT62 314 aa13.95□□□□□ -0.18
LMO3-207ENST00000439600 FANCIQ9NVI1 1328 aa13.94□□□□□ -0.18
LMO3-207ENST00000439600 TRIM37O94972 964 aa13.94□□□□□ -0.18
LMO3-207ENST00000439600 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
LMO3-207ENST00000439600 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
LMO3-207ENST00000439600 LAPTM4BQ86VI4 370 aa13.94□□□□□ -0.18
LMO3-207ENST00000439600 TSR2Q969E8 191 aaKnown RBP13.94□□□□□ -0.18
LMO3-207ENST00000439600 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
LMO3-207ENST00000439600 PLSCR1O15162 318 aa13.93□□□□□ -0.18
LMO3-207ENST00000439600 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
LMO3-207ENST00000439600 VPS9D1Q9Y2B5 631 aa13.93□□□□□ -0.18
LMO3-207ENST00000439600 MRC1P22897 1456 aa13.93□□□□□ -0.18
LMO3-207ENST00000439600 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
LMO3-207ENST00000439600 APBA3O96018 575 aa13.92□□□□□ -0.18
LMO3-207ENST00000439600 EXOSC9Q06265 439 aaKnown RBP13.92□□□□□ -0.18
LMO3-207ENST00000439600 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
LMO3-207ENST00000439600 PPP2R2DQ66LE6 453 aa13.92□□□□□ -0.18
LMO3-207ENST00000439600 RSBN1LQ6PCB5 846 aaPredicted RBP13.92□□□□□ -0.18
LMO3-207ENST00000439600 NBPF3Q9H094 633 aa13.92□□□□□ -0.18
LMO3-207ENST00000439600 WNK3Q9BYP7 1800 aa13.92□□□□□ -0.18
LMO3-207ENST00000439600 TK2O00142 265 aa13.91□□□□□ -0.18
LMO3-207ENST00000439600 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
LMO3-207ENST00000439600 STARD3NLO95772 234 aa13.91□□□□□ -0.18
LMO3-207ENST00000439600 MCM6Q14566 821 aa13.91□□□□□ -0.18
LMO3-207ENST00000439600 TWISTNBQ3B726 338 aaPredicted RBP13.91□□□□□ -0.18
LMO3-207ENST00000439600 BANK1Q8NDB2 785 aa13.91□□□□□ -0.18
LMO3-207ENST00000439600 ZNF496Q96IT1 587 aaPredicted RBP13.91□□□□□ -0.18
LMO3-207ENST00000439600 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
LMO3-207ENST00000439600 FAM205CA6NFA0 338 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 KCNQ3O43525 872 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 KDM4AO75164 1064 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 GCGRP47871 477 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 TMEM259Q4ZIN3 620 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
LMO3-207ENST00000439600 SWT1Q5T5J6 900 aaKnown RBP13.9□□□□□ -0.18
LMO3-207ENST00000439600 CCDC30Q5VVM6 783 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms