RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 NOP58Q9Y2X3 529 aaKnown RBP12.52□□□□□ -0.41
CBX5-202ENST00000439541 UTYO14607 1347 aa12.52□□□□□ -0.41
CBX5-202ENST00000439541 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 FAM177BA6PVY3 158 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 CASP7P55210 303 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
CBX5-202ENST00000439541 ANKRD44Q8N8A2 993 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
CBX5-202ENST00000439541 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 EPHA10Q5JZY3 1008 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
CBX5-202ENST00000439541 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
CBX5-202ENST00000439541 IBTKQ9P2D0 1353 aaPredicted RBP12.5□□□□□ -0.41
CBX5-202ENST00000439541 RFC4P35249 363 aa12.5□□□□□ -0.41
CBX5-202ENST00000439541 BAG6P46379 1132 aa12.5□□□□□ -0.41
CBX5-202ENST00000439541 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
CBX5-202ENST00000439541 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
CBX5-202ENST00000439541 TBC1D9BQ66K14 1250 aa12.5□□□□□ -0.41
CBX5-202ENST00000439541 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
CBX5-202ENST00000439541 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
CBX5-202ENST00000439541 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
CBX5-202ENST00000439541 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
CBX5-202ENST00000439541 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
CBX5-202ENST00000439541 ZPR1O75312 459 aa12.49□□□□□ -0.41
CBX5-202ENST00000439541 SSFA2P28290 1259 aa12.49□□□□□ -0.41
CBX5-202ENST00000439541 RWDD1Q9H446 243 aaPredicted RBP12.49□□□□□ -0.41
CBX5-202ENST00000439541 ZNF652Q9Y2D9 606 aa12.49□□□□□ -0.41
CBX5-202ENST00000439541 COL24A1Q17RW2 1714 aa12.49□□□□□ -0.41
CBX5-202ENST00000439541 H7C1W4 665 aa12.48□□□□□ -0.41
CBX5-202ENST00000439541 TRIM28Q13263 835 aaKnown RBP12.48□□□□□ -0.41
CBX5-202ENST00000439541 SUSD4Q5VX71 490 aa12.48□□□□□ -0.41
CBX5-202ENST00000439541 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
CBX5-202ENST00000439541 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
CBX5-202ENST00000439541 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
CBX5-202ENST00000439541 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
CBX5-202ENST00000439541 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
CBX5-202ENST00000439541 SRGAP3O43295 1099 aa12.47□□□□□ -0.41
CBX5-202ENST00000439541 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
CBX5-202ENST00000439541 PNPLA7Q6ZV29 1317 aa12.47□□□□□ -0.41
CBX5-202ENST00000439541 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
CBX5-202ENST00000439541 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
CBX5-202ENST00000439541 ZBTB38Q8NAP3 1195 aaPredicted RBP12.47□□□□□ -0.41
CBX5-202ENST00000439541 NTSR2O95665 410 aa12.46□□□□□ -0.41
CBX5-202ENST00000439541 GYS1P13807 737 aa12.46□□□□□ -0.41
CBX5-202ENST00000439541 ATP8B2P98198 1209 aa12.46□□□□□ -0.41
CBX5-202ENST00000439541 CLEC4GQ6UXB4 293 aa12.46□□□□□ -0.41
CBX5-202ENST00000439541 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.41
CBX5-202ENST00000439541 ABCC12Q96J65 1359 aa12.46□□□□□ -0.42
CBX5-202ENST00000439541 APBB1O00213 710 aa12.46□□□□□ -0.42
CBX5-202ENST00000439541 FOXO4P98177 505 aa12.46□□□□□ -0.42
CBX5-202ENST00000439541 CCDC85AQ96PX6 553 aaPredicted RBP12.46□□□□□ -0.42
CBX5-202ENST00000439541 EXOC6BQ9Y2D4 811 aa12.46□□□□□ -0.42
CBX5-202ENST00000439541 LAMB2P55268 1798 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 MTX1Q13505 466 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 POLA2Q14181 598 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 NFIXQ14938 502 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 SMC5Q8IY18 1101 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
CBX5-202ENST00000439541 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
CBX5-202ENST00000439541 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
CBX5-202ENST00000439541 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
CBX5-202ENST00000439541 HMMRO75330 724 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
CBX5-202ENST00000439541 SLC15A2Q16348 729 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 RABL6Q3YEC7 729 aaPredicted RBP12.44□□□□□ -0.42
CBX5-202ENST00000439541 LMBR1LQ6UX01 489 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 SSH3Q8TE77 659 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 STK32BQ9NY57 414 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
CBX5-202ENST00000439541 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 TNRC6CQ9HCJ0 1690 aaKnown RBP12.44□□□□□ -0.42
CBX5-202ENST00000439541 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 FAM161AQ3B820 660 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 SETDB2Q96T68 719 aa12.44□□□□□ -0.42
CBX5-202ENST00000439541 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
CBX5-202ENST00000439541 RGL2O15211 777 aa12.43□□□□□ -0.42
CBX5-202ENST00000439541 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
CBX5-202ENST00000439541 DCTPP1Q9H773 170 aa12.43□□□□□ -0.42
CBX5-202ENST00000439541 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
CBX5-202ENST00000439541 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
CBX5-202ENST00000439541 COL4A1P02462 1669 aa12.42□□□□□ -0.42
CBX5-202ENST00000439541 SMARCA5O60264 1052 aaPredicted RBP12.42□□□□□ -0.42
CBX5-202ENST00000439541 DDR1Q08345 913 aa12.42□□□□□ -0.42
CBX5-202ENST00000439541 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
CBX5-202ENST00000439541 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
CBX5-202ENST00000439541 LNPKQ9C0E8 428 aa12.42□□□□□ -0.42
CBX5-202ENST00000439541 HDAC5Q9UQL6 1122 aa12.42□□□□□ -0.42
CBX5-202ENST00000439541 CASZ1Q86V15 1759 aa12.42□□□□□ -0.42
CBX5-202ENST00000439541 RFX5P48382 616 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms