RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 AIMP1Q12904 312 aaKnown RBP26.47■■□□□ 1.83
NCKIPSD-206ENST00000439518 POTECB2RU33 542 aa26.46■■□□□ 1.83
NCKIPSD-206ENST00000439518 FKBP4Q02790 459 aaKnown RBP eCLIP26.46■■□□□ 1.83
NCKIPSD-206ENST00000439518 HDGFL1Q5TGJ6 251 aa26.46■■□□□ 1.83
NCKIPSD-206ENST00000439518 RTKN2Q8IZC4 609 aa26.46■■□□□ 1.83
NCKIPSD-206ENST00000439518 MBIPQ9NS73 344 aa26.46■■□□□ 1.83
NCKIPSD-206ENST00000439518 CHPF2Q9P2E5 772 aa26.46■■□□□ 1.83
NCKIPSD-206ENST00000439518 SLC10A5Q5PT55 438 aa26.45■■□□□ 1.82
NCKIPSD-206ENST00000439518 UTP14AQ9BVJ6 771 aaKnown RBP26.45■■□□□ 1.82
NCKIPSD-206ENST00000439518 CCDC184Q52MB2 194 aa26.44■■□□□ 1.82
NCKIPSD-206ENST00000439518 HSP90AB3PQ58FF7 597 aa26.44■■□□□ 1.82
NCKIPSD-206ENST00000439518 C3orf67Q6ZVT6 689 aa26.44■■□□□ 1.82
NCKIPSD-206ENST00000439518 RPGRQ92834 1020 aaKnown RBP26.44■■□□□ 1.82
NCKIPSD-206ENST00000439518 SNED1Q8TER0 1413 aa26.44■■□□□ 1.82
NCKIPSD-206ENST00000439518 WDR90Q96KV7 1748 aa26.44■■□□□ 1.82
NCKIPSD-206ENST00000439518 DUSP27Q5VZP5 1158 aa26.43■■□□□ 1.82
NCKIPSD-206ENST00000439518 CRAMP1Q96RY5 1269 aa26.43■■□□□ 1.82
NCKIPSD-206ENST00000439518 IFT57Q9NWB7 429 aa26.43■■□□□ 1.82
NCKIPSD-206ENST00000439518 RNF123Q5XPI4 1314 aa26.42■■□□□ 1.82
NCKIPSD-206ENST00000439518 CALD1Q05682 793 aaKnown RBP26.42■■□□□ 1.82
NCKIPSD-206ENST00000439518 TCIRG1Q13488 830 aa26.42■■□□□ 1.82
NCKIPSD-206ENST00000439518 NLRP10Q86W26 655 aa26.42■■□□□ 1.82
NCKIPSD-206ENST00000439518 SMC1BQ8NDV3 1235 aa26.42■■□□□ 1.82
NCKIPSD-206ENST00000439518 ZNF277Q9NRM2 450 aaPredicted RBP26.42■■□□□ 1.82
NCKIPSD-206ENST00000439518 DBF4Q9UBU7 674 aaPredicted RBP26.42■■□□□ 1.82
NCKIPSD-206ENST00000439518 CC2D2BQ6DHV5 1058 aa26.41■■□□□ 1.82
NCKIPSD-206ENST00000439518 RBM17Q96I25 401 aaKnown RBP26.41■■□□□ 1.82
NCKIPSD-206ENST00000439518 DDNO94850 711 aaPredicted RBP26.4■■□□□ 1.82
NCKIPSD-206ENST00000439518 GNAI1P63096 354 aa26.4■■□□□ 1.82
NCKIPSD-206ENST00000439518 NLRP3Q96P20 1036 aa26.4■■□□□ 1.82
NCKIPSD-206ENST00000439518 ANKRD36CQ5JPF3 1778 aa26.4■■□□□ 1.82
NCKIPSD-206ENST00000439518 SYNE4Q8N205 404 aa26.39■■□□□ 1.82
NCKIPSD-206ENST00000439518 DNAJC5GQ8N7S2 189 aa26.39■■□□□ 1.82
NCKIPSD-206ENST00000439518 PLBD2Q8NHP8 589 aa26.39■■□□□ 1.82
NCKIPSD-206ENST00000439518 PSMD1Q99460 953 aa26.39■■□□□ 1.82
NCKIPSD-206ENST00000439518 HYPKQ9NX55 129 aa26.38■■□□□ 1.81
NCKIPSD-206ENST00000439518 ZNF316A6NFI3 1004 aaPredicted RBP26.37■■□□□ 1.81
NCKIPSD-206ENST00000439518 IARSP41252 1262 aaKnown RBP26.37■■□□□ 1.81
NCKIPSD-206ENST00000439518 ANKRD13DQ6ZTN6 518 aa26.37■■□□□ 1.81
NCKIPSD-206ENST00000439518 GRIPAP1Q4V328 841 aa26.36■■□□□ 1.81
NCKIPSD-206ENST00000439518 TRMT112Q9UI30 125 aaKnown RBP26.36■■□□□ 1.81
NCKIPSD-206ENST00000439518 PPEF1O14829 653 aaPredicted RBP26.35■■□□□ 1.81
NCKIPSD-206ENST00000439518 HCLS1P14317 486 aaPredicted RBP26.35■■□□□ 1.81
NCKIPSD-206ENST00000439518 SLC51AQ86UW1 340 aa26.35■■□□□ 1.81
NCKIPSD-206ENST00000439518 L3MBTL3Q96JM7 780 aaPredicted RBP26.35■■□□□ 1.81
NCKIPSD-206ENST00000439518 ISCA1Q9BUE6 129 aa26.34■■□□□ 1.81
NCKIPSD-206ENST00000439518 SH3TC1Q8TE82 1336 aa26.34■■□□□ 1.81
NCKIPSD-206ENST00000439518 FZD9O00144 591 aa26.33■■□□□ 1.81
NCKIPSD-206ENST00000439518 ZNF541Q9H0D2 1346 aa26.33■■□□□ 1.81
NCKIPSD-206ENST00000439518 ELL2O00472 640 aaPredicted RBP26.32■■□□□ 1.8
NCKIPSD-206ENST00000439518 HTRA3P83110 453 aa26.32■■□□□ 1.8
NCKIPSD-206ENST00000439518 C8orf58Q8NAV2 365 aa26.32■■□□□ 1.8
NCKIPSD-206ENST00000439518 ABCC4O15439 1325 aa26.32■■□□□ 1.8
NCKIPSD-206ENST00000439518 TCERG1O14776 1098 aaKnown RBP26.31■■□□□ 1.8
NCKIPSD-206ENST00000439518 CCDC27Q2M243 656 aa26.31■■□□□ 1.8
NCKIPSD-206ENST00000439518 ATP6V0A2Q9Y487 856 aa26.31■■□□□ 1.8
NCKIPSD-206ENST00000439518 TRIM28Q13263 835 aaKnown RBP26.3■■□□□ 1.8
NCKIPSD-206ENST00000439518 LAMB2P55268 1798 aa26.3■■□□□ 1.8
NCKIPSD-206ENST00000439518 COL4A5P29400 1685 aa26.29■■□□□ 1.8
NCKIPSD-206ENST00000439518 IQCA1LA6NCM1 817 aa26.29■■□□□ 1.8
NCKIPSD-206ENST00000439518 ATP5J2-PTCD1G3V325 749 aa26.29■■□□□ 1.8
NCKIPSD-206ENST00000439518 BBOX1O75936 387 aa26.29■■□□□ 1.8
NCKIPSD-206ENST00000439518 POTEIP0CG38 1075 aa26.28■■□□□ 1.8
NCKIPSD-206ENST00000439518 POTEJP0CG39 1038 aa26.28■■□□□ 1.8
NCKIPSD-206ENST00000439518 JDP2Q8WYK2 163 aa26.28■■□□□ 1.8
NCKIPSD-206ENST00000439518 ZNF428Q96B54 188 aa26.28■■□□□ 1.8
NCKIPSD-206ENST00000439518 PHAXQ9H814 394 aaKnown RBP26.28■■□□□ 1.8
NCKIPSD-206ENST00000439518 ANP32CO43423 234 aa26.27■■□□□ 1.8
NCKIPSD-206ENST00000439518 WWC1Q8IX03 1113 aa26.27■■□□□ 1.8
NCKIPSD-206ENST00000439518 FAM89AQ96GI7 184 aa26.27■■□□□ 1.8
NCKIPSD-206ENST00000439518 TAF1DQ9H5J8 278 aaPredicted RBP26.27■■□□□ 1.8
NCKIPSD-206ENST00000439518 MRS2Q9HD23 443 aa26.27■■□□□ 1.8
NCKIPSD-206ENST00000439518 SCN4AP35499 1836 aa26.27■■□□□ 1.8
NCKIPSD-206ENST00000439518 NCBP3Q53F19 620 aaKnown RBP26.26■■□□□ 1.79
NCKIPSD-206ENST00000439518 CHADLQ6NUI6 762 aa26.26■■□□□ 1.79
NCKIPSD-206ENST00000439518 DDX46Q7L014 1031 aaKnown RBP26.26■■□□□ 1.79
NCKIPSD-206ENST00000439518 GPC2Q8N158 579 aa26.26■■□□□ 1.79
NCKIPSD-206ENST00000439518 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
NCKIPSD-206ENST00000439518 GOLGA2Q08379 1002 aa26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 RIC3Q7Z5B4 369 aa26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 SP8Q8IXZ3 490 aa26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 LARGE2Q8N3Y3 721 aa26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 TSR2Q969E8 191 aaKnown RBP26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 KLRG1Q96E93 195 aa26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 CHMP4AQ9BY43 222 aa26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 TMX4Q9H1E5 349 aaPredicted RBP26.25■■□□□ 1.79
NCKIPSD-206ENST00000439518 GRAPQ13588 217 aa26.24■■□□□ 1.79
NCKIPSD-206ENST00000439518 CCDC30Q5VVM6 783 aa26.24■■□□□ 1.79
NCKIPSD-206ENST00000439518 GRAPLQ8TC17 118 aaPredicted RBP26.24■■□□□ 1.79
NCKIPSD-206ENST00000439518 RTFDC1Q9BY42 306 aaPredicted RBP26.24■■□□□ 1.79
NCKIPSD-206ENST00000439518 DDX60Q8IY21 1712 aaKnown RBP26.23■■□□□ 1.79
NCKIPSD-206ENST00000439518 SF3B3Q15393 1217 aaKnown RBP26.23■■□□□ 1.79
NCKIPSD-206ENST00000439518 VPS33BQ9H267 617 aa26.23■■□□□ 1.79
NCKIPSD-206ENST00000439518 HACL1Q9UJ83 578 aa26.23■■□□□ 1.79
NCKIPSD-206ENST00000439518 EIF6P56537 245 aaKnown RBP26.22■■□□□ 1.79
NCKIPSD-206ENST00000439518 LDHDQ86WU2 507 aa26.22■■□□□ 1.79
NCKIPSD-206ENST00000439518 IL16Q14005 1332 aa26.21■■□□□ 1.79
NCKIPSD-206ENST00000439518 PPIP5K2O43314 1243 aa26.2■■□□□ 1.78
NCKIPSD-206ENST00000439518 EPHX2P34913 555 aa26.2■■□□□ 1.78
NCKIPSD-206ENST00000439518 AOC3Q16853 763 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms