RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 COL11A2P13942 1736 aaPredicted RBP13.11□□□□□ -0.31
CCDC66-207ENST00000439445 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
CCDC66-207ENST00000439445 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
CCDC66-207ENST00000439445 PRPF40BQ6NWY9 871 aaKnown RBP13.11□□□□□ -0.31
CCDC66-207ENST00000439445 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
CCDC66-207ENST00000439445 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
CCDC66-207ENST00000439445 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
CCDC66-207ENST00000439445 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
CCDC66-207ENST00000439445 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
CCDC66-207ENST00000439445 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
CCDC66-207ENST00000439445 LTBP3Q9NS15 1303 aa13.11□□□□□ -0.31
CCDC66-207ENST00000439445 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
CCDC66-207ENST00000439445 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
CCDC66-207ENST00000439445 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
CCDC66-207ENST00000439445 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
CCDC66-207ENST00000439445 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
CCDC66-207ENST00000439445 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
CCDC66-207ENST00000439445 TPTE2Q6XPS3 522 aa13.09□□□□□ -0.31
CCDC66-207ENST00000439445 FAM177BA6PVY3 158 aa13.08□□□□□ -0.32
CCDC66-207ENST00000439445 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
CCDC66-207ENST00000439445 HTATSF1O43719 755 aaKnown RBP13.08□□□□□ -0.32
CCDC66-207ENST00000439445 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
CCDC66-207ENST00000439445 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
CCDC66-207ENST00000439445 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCDC66-207ENST00000439445 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
CCDC66-207ENST00000439445 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
CCDC66-207ENST00000439445 NPR1P16066 1061 aa13.07□□□□□ -0.32
CCDC66-207ENST00000439445 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
CCDC66-207ENST00000439445 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
CCDC66-207ENST00000439445 TNS4Q8IZW8 715 aa13.07□□□□□ -0.32
CCDC66-207ENST00000439445 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
CCDC66-207ENST00000439445 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
CCDC66-207ENST00000439445 IER5LQ5T953 404 aa13.06□□□□□ -0.32
CCDC66-207ENST00000439445 C7orf43Q8WVR3 580 aa13.06□□□□□ -0.32
CCDC66-207ENST00000439445 KLRG2A4D1S0 409 aaPredicted RBP13.05□□□□□ -0.32
CCDC66-207ENST00000439445 NEFMP07197 916 aa13.05□□□□□ -0.32
CCDC66-207ENST00000439445 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
CCDC66-207ENST00000439445 HSPA1AP0DMV8 641 aaKnown RBP13.05□□□□□ -0.32
CCDC66-207ENST00000439445 HSPA1BP0DMV9 641 aaKnown RBP13.05□□□□□ -0.32
CCDC66-207ENST00000439445 HLFQ16534 295 aa13.05□□□□□ -0.32
CCDC66-207ENST00000439445 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
CCDC66-207ENST00000439445 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
CCDC66-207ENST00000439445 RGL2O15211 777 aa13.04□□□□□ -0.32
CCDC66-207ENST00000439445 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
CCDC66-207ENST00000439445 FKBP4Q02790 459 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC66-207ENST00000439445 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
CCDC66-207ENST00000439445 ZNF277Q9NRM2 450 aaPredicted RBP13.04□□□□□ -0.32
CCDC66-207ENST00000439445 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
CCDC66-207ENST00000439445 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
CCDC66-207ENST00000439445 RTKN2Q8IZC4 609 aa13.03□□□□□ -0.32
CCDC66-207ENST00000439445 SEC24BO95487 1268 aa13.02□□□□□ -0.33
CCDC66-207ENST00000439445 LDHDQ86WU2 507 aa13.02□□□□□ -0.33
CCDC66-207ENST00000439445 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.33
CCDC66-207ENST00000439445 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.33
CCDC66-207ENST00000439445 TAF1DQ9H5J8 278 aaPredicted RBP13.02□□□□□ -0.33
CCDC66-207ENST00000439445 RRP7AQ9Y3A4 280 aaKnown RBP13.02□□□□□ -0.33
CCDC66-207ENST00000439445 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
CCDC66-207ENST00000439445 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
CCDC66-207ENST00000439445 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
CCDC66-207ENST00000439445 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
CCDC66-207ENST00000439445 SCN4AP35499 1836 aa13□□□□□ -0.33
CCDC66-207ENST00000439445 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
CCDC66-207ENST00000439445 ERVV-1B6SEH8 477 aa13□□□□□ -0.33
CCDC66-207ENST00000439445 MYL6BP14649 208 aa13□□□□□ -0.33
CCDC66-207ENST00000439445 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
CCDC66-207ENST00000439445 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
CCDC66-207ENST00000439445 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
CCDC66-207ENST00000439445 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
CCDC66-207ENST00000439445 GPTP24298 496 aa12.99□□□□□ -0.33
CCDC66-207ENST00000439445 EIF4A1P60842 406 aaKnown RBP12.99□□□□□ -0.33
CCDC66-207ENST00000439445 KIF6Q6ZMV9 814 aa12.99□□□□□ -0.33
CCDC66-207ENST00000439445 TTLL7Q6ZT98 887 aa12.99□□□□□ -0.33
CCDC66-207ENST00000439445 JDP2Q8WYK2 163 aa12.99□□□□□ -0.33
CCDC66-207ENST00000439445 DLG5Q8TDM6 1919 aa12.99□□□□□ -0.33
CCDC66-207ENST00000439445 PASKQ96RG2 1323 aa12.98□□□□□ -0.33
CCDC66-207ENST00000439445 NUP98P52948 1817 aa12.98□□□□□ -0.33
CCDC66-207ENST00000439445 ITGBL1O95965 494 aaPredicted RBP12.98□□□□□ -0.33
CCDC66-207ENST00000439445 EPHX2P34913 555 aa12.98□□□□□ -0.33
CCDC66-207ENST00000439445 PSEN1P49768 467 aa12.98□□□□□ -0.33
CCDC66-207ENST00000439445 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
CCDC66-207ENST00000439445 NFE2L2Q16236 605 aa12.98□□□□□ -0.33
CCDC66-207ENST00000439445 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
CCDC66-207ENST00000439445 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
CCDC66-207ENST00000439445 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
CCDC66-207ENST00000439445 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
CCDC66-207ENST00000439445 LAMB4A4D0S4 1761 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 FZD9O00144 591 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
CCDC66-207ENST00000439445 GPC2Q8N158 579 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 PSMD1Q99460 953 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 PNNQ9H307 717 aaKnown RBP12.97□□□□□ -0.33
CCDC66-207ENST00000439445 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
CCDC66-207ENST00000439445 GJA3Q9Y6H8 435 aa12.97□□□□□ -0.33
CCDC66-207ENST00000439445 CNTNAP1P78357 1384 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 280.7 ms