RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ECHDC1Q9NTX5 307 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 YTHDC2Q9H6S0 1430 aaKnown RBP14.1□□□□□ -0.15
NEK1-201ENST00000439128 GPS2Q13227 327 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 KSR2Q6VAB6 950 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 EVI5LQ96CN4 794 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 TRIM5Q9C035 493 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 CCDC184Q52MB2 194 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 NIM1KQ8IY84 436 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 SPATA32Q96LK8 384 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
NEK1-201ENST00000439128 B4DLN1 442 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 LDHBP07195 334 aaKnown RBP14.09□□□□□ -0.15
NEK1-201ENST00000439128 MRPL12P52815 198 aaKnown RBP14.09□□□□□ -0.15
NEK1-201ENST00000439128 RNF214Q8ND24 703 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 UGGT2Q9NYU1 1516 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 TCIRG1Q13488 830 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 GRM8O00222 908 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 HMGB1P09429 215 aaKnown RBP14.09□□□□□ -0.15
NEK1-201ENST00000439128 ZNF526Q8TF50 670 aaPredicted RBP14.09□□□□□ -0.15
NEK1-201ENST00000439128 WDR97A6NE52 1622 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 MAP3K5Q99683 1374 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 WDR33Q9C0J8 1336 aaKnown RBP14.09□□□□□ -0.15
NEK1-201ENST00000439128 PATL2C9JE40 543 aaKnown RBP14.09□□□□□ -0.15
NEK1-201ENST00000439128 LETM1O95202 739 aaPredicted RBP14.09□□□□□ -0.15
NEK1-201ENST00000439128 SUPT20HQ8NEM7 779 aa14.09□□□□□ -0.15
NEK1-201ENST00000439128 TTC16Q8NEE8 873 aa14.08□□□□□ -0.15
NEK1-201ENST00000439128 GGA1Q9UJY5 639 aa14.08□□□□□ -0.15
NEK1-201ENST00000439128 C11orf95C9JLR9 678 aaPredicted RBP14.08□□□□□ -0.16
NEK1-201ENST00000439128 GUCY1B3Q02153 619 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 CFAP45Q9UL16 551 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 MAGEB6P1A0A0J9YX57 407 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 TRIM37O94972 964 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 LUC7LQ9NQ29 371 aaKnown RBP14.08□□□□□ -0.16
NEK1-201ENST00000439128 MYO6Q9UM54 1294 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 PLCG2P16885 1265 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 PPFIBP1Q86W92 1011 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 CCDC83Q8IWF9 413 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 TMOD4Q9NZQ9 345 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 TNMDQ9H2S6 317 aa14.08□□□□□ -0.16
NEK1-201ENST00000439128 CEP170Q5SW79 1584 aa14.07□□□□□ -0.16
NEK1-201ENST00000439128 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
NEK1-201ENST00000439128 CCT2P78371 535 aaKnown RBP14.07□□□□□ -0.16
NEK1-201ENST00000439128 CCDC97Q96F63 343 aaPredicted RBP14.07□□□□□ -0.16
NEK1-201ENST00000439128 C8orf76Q96K31 380 aa14.07□□□□□ -0.16
NEK1-201ENST00000439128 WDR70Q9NW82 654 aa14.07□□□□□ -0.16
NEK1-201ENST00000439128 MAP3K19Q56UN5 1328 aa14.07□□□□□ -0.16
NEK1-201ENST00000439128 IL15P40933 162 aaPredicted RBP14.07□□□□□ -0.16
NEK1-201ENST00000439128 CCDC181Q5TID7 509 aa14.07□□□□□ -0.16
NEK1-201ENST00000439128 HCLS1P14317 486 aaPredicted RBP14.07□□□□□ -0.16
NEK1-201ENST00000439128 MAP3K1Q13233 1512 aa14.07□□□□□ -0.16
NEK1-201ENST00000439128 MNS1Q8NEH6 495 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 FLAD1Q8NFF5 587 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 TSG101Q99816 390 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 BICD1Q96G01 975 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 TRAF1Q13077 416 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 PARP10Q53GL7 1025 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 MICU3Q86XE3 530 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 TMEM94Q12767 1356 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 TNNT3P45378 269 aaPredicted RBP14.06□□□□□ -0.16
NEK1-201ENST00000439128 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 CAVIN1Q6NZI2 390 aaKnown RBP14.06□□□□□ -0.16
NEK1-201ENST00000439128 SMARCC2Q8TAQ2 1214 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 PHAXQ9H814 394 aaKnown RBP14.06□□□□□ -0.16
NEK1-201ENST00000439128 NUP160Q12769 1436 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 MCM9Q9NXL9 1143 aa14.06□□□□□ -0.16
NEK1-201ENST00000439128 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 PDE6BP35913 854 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 CDR1P51861 262 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 SLC9C2Q5TAH2 1124 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 H7C1D1 291 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 PPIP5K2O43314 1243 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 ALDH1L1O75891 902 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
NEK1-201ENST00000439128 MIGA1Q8NAN2 632 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 NCOA7Q8NI08 942 aa14.05□□□□□ -0.16
NEK1-201ENST00000439128 K7ELQ4 463 aaPredicted RBP14.04□□□□□ -0.16
NEK1-201ENST00000439128 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 NOD1Q9Y239 953 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 ALDH1B1P30837 517 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 CWF19L2Q2TBE0 894 aaKnown RBP14.04□□□□□ -0.16
NEK1-201ENST00000439128 UPF3BQ9BZI7 483 aaKnown RBP14.04□□□□□ -0.16
NEK1-201ENST00000439128 TMEM2Q9UHN6 1383 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 MBD3O95983 291 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 TRIM27P14373 513 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 EIF5P55010 431 aaKnown RBP14.04□□□□□ -0.16
NEK1-201ENST00000439128 KRT27Q7Z3Y8 459 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 LTKP29376 864 aa14.04□□□□□ -0.16
NEK1-201ENST00000439128 WTAPQ15007 396 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 TSHZ3Q63HK5 1081 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 FERMT3Q86UX7 667 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 SYCP3Q8IZU3 236 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 CALML4Q96GE6 196 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 IVNS1ABPQ9Y6Y0 642 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 RPRD2Q5VT52 1461 aaKnown RBP14.03□□□□□ -0.16
NEK1-201ENST00000439128 ESR2Q92731 530 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 IARSP41252 1262 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms