RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
PRAME-209ENST00000439106 CALD1Q05682 793 aaKnown RBP17.96■□□□□ 0.47
PRAME-209ENST00000439106 CRY2Q49AN0 593 aa17.96■□□□□ 0.47
PRAME-209ENST00000439106 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
PRAME-209ENST00000439106 PPP1R42Q7Z4L9 355 aa17.96■□□□□ 0.47
PRAME-209ENST00000439106 SYNE4Q8N205 404 aa17.96■□□□□ 0.47
PRAME-209ENST00000439106 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
PRAME-209ENST00000439106 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.47
PRAME-209ENST00000439106 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.46
PRAME-209ENST00000439106 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
PRAME-209ENST00000439106 CCDC93Q567U6 631 aa17.95■□□□□ 0.46
PRAME-209ENST00000439106 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
PRAME-209ENST00000439106 TSPYL6Q8N831 410 aa17.95■□□□□ 0.46
PRAME-209ENST00000439106 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
PRAME-209ENST00000439106 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
PRAME-209ENST00000439106 CACNA1FO60840 1977 aa17.94■□□□□ 0.46
PRAME-209ENST00000439106 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
PRAME-209ENST00000439106 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
PRAME-209ENST00000439106 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
PRAME-209ENST00000439106 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
PRAME-209ENST00000439106 LTBP3Q9NS15 1303 aa17.94■□□□□ 0.46
PRAME-209ENST00000439106 ZC3H4Q9UPT8 1303 aaKnown RBP17.94■□□□□ 0.46
PRAME-209ENST00000439106 COL4A1P02462 1669 aa17.93■□□□□ 0.46
PRAME-209ENST00000439106 CEP350Q5VT06 3117 aa17.93■□□□□ 0.46
PRAME-209ENST00000439106 SNED1Q8TER0 1413 aa17.93■□□□□ 0.46
PRAME-209ENST00000439106 ATP5J2-PTCD1G3V325 749 aa17.93■□□□□ 0.46
PRAME-209ENST00000439106 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
PRAME-209ENST00000439106 SOGA3Q5TF21 947 aa17.93■□□□□ 0.46
PRAME-209ENST00000439106 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
PRAME-209ENST00000439106 GLTPD2A6NH11 291 aa17.92■□□□□ 0.46
PRAME-209ENST00000439106 HCLS1P14317 486 aaPredicted RBP17.92■□□□□ 0.46
PRAME-209ENST00000439106 ALDH1B1P30837 517 aa17.92■□□□□ 0.46
PRAME-209ENST00000439106 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
PRAME-209ENST00000439106 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
PRAME-209ENST00000439106 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
PRAME-209ENST00000439106 HYPKQ9NX55 129 aa17.92■□□□□ 0.46
PRAME-209ENST00000439106 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
PRAME-209ENST00000439106 COL4A5P29400 1685 aa17.92■□□□□ 0.46
PRAME-209ENST00000439106 TOMM70O94826 608 aa17.91■□□□□ 0.46
PRAME-209ENST00000439106 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
PRAME-209ENST00000439106 MYH3P11055 1940 aa17.91■□□□□ 0.46
PRAME-209ENST00000439106 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
PRAME-209ENST00000439106 FKBP4Q02790 459 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRAME-209ENST00000439106 RTL5Q5HYW3 569 aaPredicted RBP17.9■□□□□ 0.46
PRAME-209ENST00000439106 RBM17Q96I25 401 aaKnown RBP17.9■□□□□ 0.46
PRAME-209ENST00000439106 NLRP3Q96P20 1036 aa17.9■□□□□ 0.46
PRAME-209ENST00000439106 PPEF1O14829 653 aaPredicted RBP17.89■□□□□ 0.45
PRAME-209ENST00000439106 HSPA6P17066 643 aa17.89■□□□□ 0.45
PRAME-209ENST00000439106 HOXA10P31260 410 aaPredicted RBP17.89■□□□□ 0.45
PRAME-209ENST00000439106 C16orf71Q8IYS4 520 aaPredicted RBP17.89■□□□□ 0.45
PRAME-209ENST00000439106 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
PRAME-209ENST00000439106 ABCC4O15439 1325 aa17.89■□□□□ 0.45
PRAME-209ENST00000439106 SH3TC1Q8TE82 1336 aa17.89■□□□□ 0.45
PRAME-209ENST00000439106 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.45
PRAME-209ENST00000439106 SCN4AP35499 1836 aa17.88■□□□□ 0.45
PRAME-209ENST00000439106 SLC10A5Q5PT55 438 aa17.88■□□□□ 0.45
PRAME-209ENST00000439106 RIC3Q7Z5B4 369 aa17.88■□□□□ 0.45
PRAME-209ENST00000439106 CRAMP1Q96RY5 1269 aa17.88■□□□□ 0.45
PRAME-209ENST00000439106 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
PRAME-209ENST00000439106 POTECB2RU33 542 aa17.87■□□□□ 0.45
PRAME-209ENST00000439106 DDNO94850 711 aaPredicted RBP17.87■□□□□ 0.45
PRAME-209ENST00000439106 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
PRAME-209ENST00000439106 RTKN2Q8IZC4 609 aa17.87■□□□□ 0.45
PRAME-209ENST00000439106 FAM89AQ96GI7 184 aa17.87■□□□□ 0.45
PRAME-209ENST00000439106 MYD88Q99836 296 aa17.87■□□□□ 0.45
PRAME-209ENST00000439106 ZNF541Q9H0D2 1346 aa17.87■□□□□ 0.45
PRAME-209ENST00000439106 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
PRAME-209ENST00000439106 TWISTNBQ3B726 338 aaPredicted RBP17.86■□□□□ 0.45
PRAME-209ENST00000439106 CCDC30Q5VVM6 783 aa17.86■□□□□ 0.45
PRAME-209ENST00000439106 RBM46Q8TBY0 533 aaKnown RBP17.86■□□□□ 0.45
PRAME-209ENST00000439106 IARSP41252 1262 aaKnown RBP17.85■□□□□ 0.45
PRAME-209ENST00000439106 IL16Q14005 1332 aa17.85■□□□□ 0.45
PRAME-209ENST00000439106 DPY19L2Q6NUT2 758 aa17.85■□□□□ 0.45
PRAME-209ENST00000439106 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
PRAME-209ENST00000439106 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
PRAME-209ENST00000439106 G2E3Q7L622 706 aa17.84■□□□□ 0.45
PRAME-209ENST00000439106 JARID2Q92833 1246 aaPredicted RBP17.84■□□□□ 0.45
PRAME-209ENST00000439106 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
PRAME-209ENST00000439106 DUOX1Q9NRD9 1551 aa17.83■□□□□ 0.45
PRAME-209ENST00000439106 PSMD1Q99460 953 aa17.83■□□□□ 0.44
PRAME-209ENST00000439106 HTRA3P83110 453 aa17.82■□□□□ 0.44
PRAME-209ENST00000439106 MAP3K2Q9Y2U5 619 aa17.82■□□□□ 0.44
PRAME-209ENST00000439106 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
PRAME-209ENST00000439106 POTEIP0CG38 1075 aa17.81■□□□□ 0.44
PRAME-209ENST00000439106 POTEJP0CG39 1038 aa17.81■□□□□ 0.44
PRAME-209ENST00000439106 EXOSC9Q06265 439 aaKnown RBP17.81■□□□□ 0.44
PRAME-209ENST00000439106 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
PRAME-209ENST00000439106 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
PRAME-209ENST00000439106 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
PRAME-209ENST00000439106 STK31Q9BXU1 1019 aa17.81■□□□□ 0.44
PRAME-209ENST00000439106 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
PRAME-209ENST00000439106 PI4KAP2A4QPH2 592 aa17.8■□□□□ 0.44
PRAME-209ENST00000439106 TRIM28Q13263 835 aaKnown RBP17.8■□□□□ 0.44
PRAME-209ENST00000439106 GRAPQ13588 217 aa17.8■□□□□ 0.44
PRAME-209ENST00000439106 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
PRAME-209ENST00000439106 PI4KAP1Q8N8J0 262 aa17.8■□□□□ 0.44
PRAME-209ENST00000439106 GRAPLQ8TC17 118 aaPredicted RBP17.8■□□□□ 0.44
PRAME-209ENST00000439106 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
PRAME-209ENST00000439106 METTL22Q9BUU2 404 aaPredicted RBP17.8■□□□□ 0.44
PRAME-209ENST00000439106 ADAMTSL1Q8N6G6 1762 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms