RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ADH7P40394 386 aa6.44□□□□□ -1.38
HMGB1P18-201ENST00000438801 BTLAQ7Z6A9 289 aa6.44□□□□□ -1.38
HMGB1P18-201ENST00000438801 PRDM6Q9NQX0 595 aa6.44□□□□□ -1.38
HMGB1P18-201ENST00000438801 STARD13Q9Y3M8 1113 aa6.44□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L15C9J2P7 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L10C9JJH3 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L13C9JLJ4 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L12C9JPN9 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L11C9JVI0 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L21D6R901 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L18D6R9N7 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L22D6RA61 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L17D6RBQ6 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L19D6RCP7 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L20D6RJB6 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 LGR5O75473 907 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 LMOD1P29536 600 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 USP17L24Q0WX57 530 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 RTN1Q16799 776 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 ANKMY2Q8IV38 441 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 MICALL1Q8N3F8 863 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 BHMTQ93088 406 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 VRTNQ9H8Y1 702 aa6.43□□□□□ -1.38
HMGB1P18-201ENST00000438801 IGFBP4P22692 258 aa6.42□□□□□ -1.38
HMGB1P18-201ENST00000438801 COL9A3Q14050 684 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P18-201ENST00000438801 PRRT3Q5FWE3 981 aa6.42□□□□□ -1.38
HMGB1P18-201ENST00000438801 C8orf86Q6ZUL3 223 aa6.42□□□□□ -1.38
HMGB1P18-201ENST00000438801 TGFBR3LH3BV60 316 aa6.41□□□□□ -1.38
HMGB1P18-201ENST00000438801 GATA4P43694 442 aa6.41□□□□□ -1.38
HMGB1P18-201ENST00000438801 IER5Q5VY09 327 aa6.41□□□□□ -1.38
HMGB1P18-201ENST00000438801 C20orf204Q6ZNR8 217 aa6.41□□□□□ -1.38
HMGB1P18-201ENST00000438801 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
HMGB1P18-201ENST00000438801 EFCC1Q9HA90 598 aa6.41□□□□□ -1.38
HMGB1P18-201ENST00000438801 APBA3O96018 575 aa6.4□□□□□ -1.38
HMGB1P18-201ENST00000438801 NID1P14543 1247 aa6.4□□□□□ -1.38
HMGB1P18-201ENST00000438801 TBC1D8BQ0IIM8 1120 aa6.4□□□□□ -1.38
HMGB1P18-201ENST00000438801 DOC2BQ14184 412 aa6.4□□□□□ -1.38
HMGB1P18-201ENST00000438801 ARXQ96QS3 562 aa6.4□□□□□ -1.38
HMGB1P18-201ENST00000438801 IGFLR1Q9H665 355 aa6.4□□□□□ -1.38
HMGB1P18-201ENST00000438801 BCS1LQ9Y276 419 aa6.4□□□□□ -1.38
HMGB1P18-201ENST00000438801 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
HMGB1P18-201ENST00000438801 TRIM28Q13263 835 aaKnown RBP6.39□□□□□ -1.39
HMGB1P18-201ENST00000438801 PNMA5Q96PV4 448 aa6.39□□□□□ -1.39
HMGB1P18-201ENST00000438801 GSX2Q9BZM3 304 aa6.39□□□□□ -1.39
HMGB1P18-201ENST00000438801 DMGDHQ9UI17 866 aaKnown RBP6.39□□□□□ -1.39
HMGB1P18-201ENST00000438801 SLC6A14Q9UN76 642 aa6.39□□□□□ -1.39
HMGB1P18-201ENST00000438801 LILRB5O75023 590 aa6.38□□□□□ -1.39
HMGB1P18-201ENST00000438801 EPB42P16452 691 aa6.38□□□□□ -1.39
HMGB1P18-201ENST00000438801 CCINQ13939 588 aa6.38□□□□□ -1.39
HMGB1P18-201ENST00000438801 CFAP70Q5T0N1 1121 aa6.38□□□□□ -1.39
HMGB1P18-201ENST00000438801 KLK14Q9P0G3 267 aa6.38□□□□□ -1.39
HMGB1P18-201ENST00000438801 ZNF777Q9ULD5 760 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P18-201ENST00000438801 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P18-201ENST00000438801 FOXO3O43524 673 aa6.37□□□□□ -1.39
HMGB1P18-201ENST00000438801 WEE1P30291 646 aa6.37□□□□□ -1.39
HMGB1P18-201ENST00000438801 DGKZQ13574 1117 aa6.37□□□□□ -1.39
HMGB1P18-201ENST00000438801 TRAPPC3LQ5T215 181 aa6.37□□□□□ -1.39
HMGB1P18-201ENST00000438801 FAM200AQ8TCP9 573 aa6.37□□□□□ -1.39
HMGB1P18-201ENST00000438801 DNAJB12Q9NXW2 375 aaKnown RBP6.37□□□□□ -1.39
HMGB1P18-201ENST00000438801 NFKB1P19838 968 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 RFX1P22670 979 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 GRNP28799 593 aaKnown RBP6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 INPP5BP32019 993 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 IDH3AP50213 366 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 GRIK4Q16099 956 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 NUDT8Q8WV74 236 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 VTI1AQ96AJ9 217 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 NACC1Q96RE7 527 aa6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 QTRT2Q9H974 415 aaKnown RBP6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 JPH1Q9HDC5 661 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P18-201ENST00000438801 ARSDP51689 593 aa6.35□□□□□ -1.39
HMGB1P18-201ENST00000438801 CDCA8Q53HL2 280 aa6.35□□□□□ -1.39
HMGB1P18-201ENST00000438801 XP32Q5T750 250 aa6.35□□□□□ -1.39
HMGB1P18-201ENST00000438801 PSAPL1Q6NUJ1 521 aa6.35□□□□□ -1.39
HMGB1P18-201ENST00000438801 SEMA6BQ9H3T3 888 aa6.35□□□□□ -1.39
HMGB1P18-201ENST00000438801 NAGPAQ9UK23 515 aa6.35□□□□□ -1.39
HMGB1P18-201ENST00000438801 C11orf91Q3C1V1 193 aa6.34□□□□□ -1.39
HMGB1P18-201ENST00000438801 MYO19Q96H55 970 aa6.34□□□□□ -1.39
HMGB1P18-201ENST00000438801 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB1P18-201ENST00000438801 A0A0A0MRY4 1105 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 C9orf172C9J069 976 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 RGS9O75916 674 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 MICAL2O94851 1124 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 MAP3K6O95382 1288 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 ITGB7P26010 798 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 AFF1P51825 1210 aaKnown RBP6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 PCSK7Q16549 785 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 RSPO4Q2I0M5 234 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 ILDR2Q71H61 639 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 KRT25Q7Z3Z0 450 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 C11orf16Q9NQ32 467 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
HMGB1P18-201ENST00000438801 ELNP15502 786 aa6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 TARSP26639 723 aaKnown RBP6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 RAC1P63000 192 aa6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 DHX32Q7L7V1 743 aaKnown RBP6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 FAM35AQ86V20 835 aa6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 Q8N3U1 123 aa6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 ZFATQ9P243 1243 aa6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 LRFN2Q9ULH4 789 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms