RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
CUBN-204ENST00000438254 LRRC4BQ9NT99 713 aa12.32□□□□□ -0.44
CUBN-204ENST00000438254 CCDC87Q9NVE4 849 aa12.32□□□□□ -0.44
CUBN-204ENST00000438254 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
CUBN-204ENST00000438254 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
CUBN-204ENST00000438254 ZBTB7BO15156 539 aaPredicted RBP12.31□□□□□ -0.44
CUBN-204ENST00000438254 KCNQ4P56696 695 aa12.31□□□□□ -0.44
CUBN-204ENST00000438254 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
CUBN-204ENST00000438254 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
CUBN-204ENST00000438254 BEND3Q5T5X7 828 aa12.3□□□□□ -0.44
CUBN-204ENST00000438254 TTLL7Q6ZT98 887 aa12.3□□□□□ -0.44
CUBN-204ENST00000438254 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
CUBN-204ENST00000438254 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
CUBN-204ENST00000438254 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
CUBN-204ENST00000438254 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
CUBN-204ENST00000438254 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
CUBN-204ENST00000438254 CCT4P50991 539 aaKnown RBP12.29□□□□□ -0.44
CUBN-204ENST00000438254 AAMPQ13685 434 aa12.29□□□□□ -0.44
CUBN-204ENST00000438254 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
CUBN-204ENST00000438254 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
CUBN-204ENST00000438254 BCORQ6W2J9 1755 aa12.28□□□□□ -0.44
CUBN-204ENST00000438254 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
CUBN-204ENST00000438254 AIMP1Q12904 312 aaKnown RBP12.28□□□□□ -0.44
CUBN-204ENST00000438254 TXNRD1Q16881 649 aa12.28□□□□□ -0.44
CUBN-204ENST00000438254 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
CUBN-204ENST00000438254 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
CUBN-204ENST00000438254 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
CUBN-204ENST00000438254 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
CUBN-204ENST00000438254 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
CUBN-204ENST00000438254 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 APBA3O96018 575 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 IGKV5-2P06315 115 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
CUBN-204ENST00000438254 AMIGO3Q86WK7 504 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 LINS1Q8NG48 757 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 PPP4R2Q9NY27 417 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 MAP3K15Q6ZN16 1313 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 COL15A1P39059 1388 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
CUBN-204ENST00000438254 SCN7AQ01118 1682 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 ERVV-1B6SEH8 477 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 RGL2O15211 777 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 RIC3Q7Z5B4 369 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 CAMKK2Q96RR4 588 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 SRCIN1Q9C0H9 1055 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 UTYO14607 1347 aa12.26□□□□□ -0.45
CUBN-204ENST00000438254 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
CUBN-204ENST00000438254 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
CUBN-204ENST00000438254 NEURL1BA8MQ27 555 aa12.25□□□□□ -0.45
CUBN-204ENST00000438254 CAMTA2O94983 1202 aa12.25□□□□□ -0.45
CUBN-204ENST00000438254 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
CUBN-204ENST00000438254 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
CUBN-204ENST00000438254 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
CUBN-204ENST00000438254 MEIS3Q99687 375 aa12.25□□□□□ -0.45
CUBN-204ENST00000438254 ISCA1Q9BUE6 129 aa12.25□□□□□ -0.45
CUBN-204ENST00000438254 NUP98P52948 1817 aa12.24□□□□□ -0.45
CUBN-204ENST00000438254 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
CUBN-204ENST00000438254 TCIRG1Q13488 830 aa12.24□□□□□ -0.45
CUBN-204ENST00000438254 HLFQ16534 295 aa12.24□□□□□ -0.45
CUBN-204ENST00000438254 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
CUBN-204ENST00000438254 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
CUBN-204ENST00000438254 MYD88Q99836 296 aa12.24□□□□□ -0.45
CUBN-204ENST00000438254 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
CUBN-204ENST00000438254 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
CUBN-204ENST00000438254 HMGB2P26583 209 aaKnown RBP12.23□□□□□ -0.45
CUBN-204ENST00000438254 CASP7P55210 303 aa12.23□□□□□ -0.45
CUBN-204ENST00000438254 GCKRQ14397 625 aa12.23□□□□□ -0.45
CUBN-204ENST00000438254 KIF6Q6ZMV9 814 aa12.23□□□□□ -0.45
CUBN-204ENST00000438254 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
CUBN-204ENST00000438254 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
CUBN-204ENST00000438254 A0A087WZG4 1122 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 GNPATO15228 680 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
CUBN-204ENST00000438254 MMRN1Q13201 1228 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 NARFQ9UHQ1 456 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
CUBN-204ENST00000438254 AFDNP55196 1824 aaKnown RBP12.22□□□□□ -0.45
CUBN-204ENST00000438254 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
CUBN-204ENST00000438254 KDM2BQ8NHM5 1336 aa12.21□□□□□ -0.45
CUBN-204ENST00000438254 GNAI3P08754 354 aa12.21□□□□□ -0.45
CUBN-204ENST00000438254 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
CUBN-204ENST00000438254 NEXNQ0ZGT2 675 aa12.21□□□□□ -0.45
CUBN-204ENST00000438254 EZH2Q15910 746 aaKnown RBP12.21□□□□□ -0.45
CUBN-204ENST00000438254 ZNF827Q17R98 1081 aa12.21□□□□□ -0.45
CUBN-204ENST00000438254 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
CUBN-204ENST00000438254 SIRT2Q8IXJ6 389 aa12.21□□□□□ -0.45
CUBN-204ENST00000438254 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.45
CUBN-204ENST00000438254 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
CUBN-204ENST00000438254 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.45
CUBN-204ENST00000438254 QSER1Q2KHR3 1735 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 UBN2Q6ZU65 1347 aa12.2□□□□□ -0.46
CUBN-204ENST00000438254 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
CUBN-204ENST00000438254 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms