RNA–Protein interactions for RNA: ENST00000438223.5

SMTN-210, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-210ENST00000438223 CCDC30Q5VVM6 783 aa20.48■□□□□ 0.87
SMTN-210ENST00000438223 STYK1Q6J9G0 422 aa20.48■□□□□ 0.87
SMTN-210ENST00000438223 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
SMTN-210ENST00000438223 VAMP4O75379 141 aa20.47■□□□□ 0.87
SMTN-210ENST00000438223 PARP10Q53GL7 1025 aa20.47■□□□□ 0.87
SMTN-210ENST00000438223 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
SMTN-210ENST00000438223 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
SMTN-210ENST00000438223 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
SMTN-210ENST00000438223 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
SMTN-210ENST00000438223 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
SMTN-210ENST00000438223 ARFGEF2Q9Y6D5 1785 aa20.46■□□□□ 0.87
SMTN-210ENST00000438223 HCLS1P14317 486 aaPredicted RBP20.46■□□□□ 0.87
SMTN-210ENST00000438223 C9orf131Q5VYM1 1079 aa20.46■□□□□ 0.87
SMTN-210ENST00000438223 PPP1R42Q7Z4L9 355 aa20.46■□□□□ 0.87
SMTN-210ENST00000438223 NFKBIEO00221 500 aa20.45■□□□□ 0.86
SMTN-210ENST00000438223 NPR1P16066 1061 aa20.45■□□□□ 0.86
SMTN-210ENST00000438223 GOLGA2Q08379 1002 aa20.45■□□□□ 0.86
SMTN-210ENST00000438223 HSP90AB3PQ58FF7 597 aa20.45■□□□□ 0.86
SMTN-210ENST00000438223 RIC3Q7Z5B4 369 aa20.45■□□□□ 0.86
SMTN-210ENST00000438223 CNKSR1Q969H4 720 aa20.45■□□□□ 0.86
SMTN-210ENST00000438223 PDZRN3Q9UPQ7 1066 aa20.45■□□□□ 0.86
SMTN-210ENST00000438223 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
SMTN-210ENST00000438223 JARID2Q92833 1246 aaPredicted RBP20.44■□□□□ 0.86
SMTN-210ENST00000438223 MYD88Q99836 296 aa20.44■□□□□ 0.86
SMTN-210ENST00000438223 TRMT112Q9UI30 125 aaKnown RBP20.44■□□□□ 0.86
SMTN-210ENST00000438223 SLC4A2P04920 1241 aa20.43■□□□□ 0.86
SMTN-210ENST00000438223 CRY2Q49AN0 593 aa20.43■□□□□ 0.86
SMTN-210ENST00000438223 C7orf43Q8WVR3 580 aa20.43■□□□□ 0.86
SMTN-210ENST00000438223 CDCA7LQ96GN5 454 aa20.43■□□□□ 0.86
SMTN-210ENST00000438223 RNF181Q9P0P0 153 aa20.43■□□□□ 0.86
SMTN-210ENST00000438223 FAM89AQ96GI7 184 aa20.42■□□□□ 0.86
SMTN-210ENST00000438223 SLC10A5Q5PT55 438 aa20.41■□□□□ 0.86
SMTN-210ENST00000438223 STK31Q9BXU1 1019 aa20.41■□□□□ 0.86
SMTN-210ENST00000438223 MYH16Q9H6N6 1097 aa20.41■□□□□ 0.86
SMTN-210ENST00000438223 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
SMTN-210ENST00000438223 SBF1O95248 1867 aa20.41■□□□□ 0.86
SMTN-210ENST00000438223 PI4KAP2A4QPH2 592 aa20.4■□□□□ 0.86
SMTN-210ENST00000438223 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
SMTN-210ENST00000438223 PI4KAP1Q8N8J0 262 aa20.4■□□□□ 0.86
SMTN-210ENST00000438223 LAMB2P55268 1798 aa20.39■□□□□ 0.86
SMTN-210ENST00000438223 SH3TC1Q8TE82 1336 aa20.39■□□□□ 0.85
SMTN-210ENST00000438223 METTL22Q9BUU2 404 aaPredicted RBP20.39■□□□□ 0.85
SMTN-210ENST00000438223 HOXA10P31260 410 aaPredicted RBP20.38■□□□□ 0.85
SMTN-210ENST00000438223 KSR2Q6VAB6 950 aa20.38■□□□□ 0.85
SMTN-210ENST00000438223 RPGRQ92834 1020 aaKnown RBP20.38■□□□□ 0.85
SMTN-210ENST00000438223 NLRP3Q96P20 1036 aa20.38■□□□□ 0.85
SMTN-210ENST00000438223 FER1L6Q2WGJ9 1857 aa20.37■□□□□ 0.85
SMTN-210ENST00000438223 DDX60Q8IY21 1712 aaKnown RBP20.37■□□□□ 0.85
SMTN-210ENST00000438223 IGKV5-2P06315 115 aa20.37■□□□□ 0.85
SMTN-210ENST00000438223 SLFN5Q08AF3 891 aa20.37■□□□□ 0.85
SMTN-210ENST00000438223 FLIIQ13045 1269 aa20.37■□□□□ 0.85
SMTN-210ENST00000438223 TRIM28Q13263 835 aaKnown RBP20.37■□□□□ 0.85
SMTN-210ENST00000438223 COL4A1P02462 1669 aa20.37■□□□□ 0.85
SMTN-210ENST00000438223 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
SMTN-210ENST00000438223 CCDC88AQ3V6T2 1871 aa20.36■□□□□ 0.85
SMTN-210ENST00000438223 TAF1P21675 1872 aa20.35■□□□□ 0.85
SMTN-210ENST00000438223 ABCC4O15439 1325 aa20.35■□□□□ 0.85
SMTN-210ENST00000438223 LMNB1P20700 586 aa20.35■□□□□ 0.85
SMTN-210ENST00000438223 ALDH1B1P30837 517 aa20.35■□□□□ 0.85
SMTN-210ENST00000438223 CWF19L2Q2TBE0 894 aaKnown RBP20.35■□□□□ 0.85
SMTN-210ENST00000438223 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
SMTN-210ENST00000438223 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
SMTN-210ENST00000438223 F6X3S4 739 aa20.34■□□□□ 0.85
SMTN-210ENST00000438223 IRS4O14654 1257 aaPredicted RBP20.34■□□□□ 0.85
SMTN-210ENST00000438223 CCDC93Q567U6 631 aa20.34■□□□□ 0.85
SMTN-210ENST00000438223 CRAMP1Q96RY5 1269 aa20.34■□□□□ 0.85
SMTN-210ENST00000438223 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
SMTN-210ENST00000438223 GPBP1L1Q9HC44 474 aaPredicted RBP20.34■□□□□ 0.85
SMTN-210ENST00000438223 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
SMTN-210ENST00000438223 E9PSI1 815 aa20.33■□□□□ 0.85
SMTN-210ENST00000438223 PPEF1O14829 653 aaPredicted RBP20.33■□□□□ 0.85
SMTN-210ENST00000438223 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.85
SMTN-210ENST00000438223 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.85
SMTN-210ENST00000438223 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
SMTN-210ENST00000438223 ZNF277Q9NRM2 450 aaPredicted RBP20.33■□□□□ 0.85
SMTN-210ENST00000438223 CWC25Q9NXE8 425 aaPredicted RBP20.33■□□□□ 0.85
SMTN-210ENST00000438223 CCDC191Q8NCU4 936 aa20.32■□□□□ 0.84
SMTN-210ENST00000438223 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
SMTN-210ENST00000438223 CCDC85AQ96PX6 553 aaPredicted RBP20.31■□□□□ 0.84
SMTN-210ENST00000438223 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
SMTN-210ENST00000438223 LTBP3Q9NS15 1303 aa20.3■□□□□ 0.84
SMTN-210ENST00000438223 NEURL1BA8MQ27 555 aa20.3■□□□□ 0.84
SMTN-210ENST00000438223 PCCAP05165 728 aaPredicted RBP20.3■□□□□ 0.84
SMTN-210ENST00000438223 FKBP4Q02790 459 aaKnown RBP eCLIP20.3■□□□□ 0.84
SMTN-210ENST00000438223 TRMT2AQ8IZ69 625 aaKnown RBP20.3■□□□□ 0.84
SMTN-210ENST00000438223 KIF3CO14782 793 aa20.29■□□□□ 0.84
SMTN-210ENST00000438223 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
SMTN-210ENST00000438223 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
SMTN-210ENST00000438223 CELF1Q92879 486 aaKnown RBP20.29■□□□□ 0.84
SMTN-210ENST00000438223 BCL2L13Q9BXK5 485 aa20.29■□□□□ 0.84
SMTN-210ENST00000438223 SF3B3Q15393 1217 aaKnown RBP20.28■□□□□ 0.84
SMTN-210ENST00000438223 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
SMTN-210ENST00000438223 MRPL50Q8N5N7 158 aaKnown RBP20.28■□□□□ 0.84
SMTN-210ENST00000438223 SEC31BQ9NQW1 1179 aa20.28■□□□□ 0.84
SMTN-210ENST00000438223 COL4A5P29400 1685 aa20.28■□□□□ 0.84
SMTN-210ENST00000438223 GRAPQ13588 217 aa20.27■□□□□ 0.84
SMTN-210ENST00000438223 RTKN2Q8IZC4 609 aa20.27■□□□□ 0.84
SMTN-210ENST00000438223 GRAPLQ8TC17 118 aaPredicted RBP20.27■□□□□ 0.84
SMTN-210ENST00000438223 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
SMTN-210ENST00000438223 ATP6V0A2Q9Y487 856 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms