RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CNKSR1Q969H4 720 aa20.94■□□□□ 0.94
CTSD-205ENST00000438213 METTL22Q9BUU2 404 aaPredicted RBP20.94■□□□□ 0.94
CTSD-205ENST00000438213 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 NPR1P16066 1061 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 NEXNQ0ZGT2 675 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 SLC10A5Q5PT55 438 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 G2E3Q7L622 706 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 ZNF428Q96B54 188 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 MYD88Q99836 296 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
CTSD-205ENST00000438213 FKBP5Q13451 457 aaPredicted RBP20.92■□□□□ 0.94
CTSD-205ENST00000438213 NLRP3Q96P20 1036 aa20.92■□□□□ 0.94
CTSD-205ENST00000438213 CT47B1P0C2W7 299 aaPredicted RBP20.91■□□□□ 0.94
CTSD-205ENST00000438213 ARHGAP27Q6ZUM4 889 aa20.91■□□□□ 0.94
CTSD-205ENST00000438213 CCDC191Q8NCU4 936 aa20.91■□□□□ 0.94
CTSD-205ENST00000438213 SH3TC1Q8TE82 1336 aa20.91■□□□□ 0.94
CTSD-205ENST00000438213 KIAA1551Q9HCM1 1747 aa20.91■□□□□ 0.94
CTSD-205ENST00000438213 ALDH1B1P30837 517 aa20.9■□□□□ 0.94
CTSD-205ENST00000438213 CACNA1FO60840 1977 aa20.9■□□□□ 0.94
CTSD-205ENST00000438213 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.93
CTSD-205ENST00000438213 YY1P25490 414 aa20.89■□□□□ 0.93
CTSD-205ENST00000438213 CWC25Q9NXE8 425 aaPredicted RBP20.89■□□□□ 0.93
CTSD-205ENST00000438213 CRY2Q49AN0 593 aa20.88■□□□□ 0.93
CTSD-205ENST00000438213 DNAAF4Q8WXU2 420 aa20.88■□□□□ 0.93
CTSD-205ENST00000438213 RPGRQ92834 1020 aaKnown RBP20.88■□□□□ 0.93
CTSD-205ENST00000438213 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
CTSD-205ENST00000438213 ABCC12Q96J65 1359 aa20.87■□□□□ 0.93
CTSD-205ENST00000438213 HCLS1P14317 486 aaPredicted RBP20.87■□□□□ 0.93
CTSD-205ENST00000438213 ZBTB38Q8NAP3 1195 aaPredicted RBP20.87■□□□□ 0.93
CTSD-205ENST00000438213 FAM89AQ96GI7 184 aa20.87■□□□□ 0.93
CTSD-205ENST00000438213 RBM17Q96I25 401 aaKnown RBP20.87■□□□□ 0.93
CTSD-205ENST00000438213 RIC1Q4ADV7 1423 aa20.87■□□□□ 0.93
CTSD-205ENST00000438213 ADCY9O60503 1353 aa20.86■□□□□ 0.93
CTSD-205ENST00000438213 ALDH1L2Q3SY69 923 aa20.86■□□□□ 0.93
CTSD-205ENST00000438213 SYNE4Q8N205 404 aa20.86■□□□□ 0.93
CTSD-205ENST00000438213 HOXA10P31260 410 aaPredicted RBP20.85■□□□□ 0.93
CTSD-205ENST00000438213 SOGA3Q5TF21 947 aa20.85■□□□□ 0.93
CTSD-205ENST00000438213 PRPF40BQ6NWY9 871 aaKnown RBP20.85■□□□□ 0.93
CTSD-205ENST00000438213 MRPL50Q8N5N7 158 aaKnown RBP20.85■□□□□ 0.93
CTSD-205ENST00000438213 ANKRD36CQ5JPF3 1778 aa20.85■□□□□ 0.93
CTSD-205ENST00000438213 BRCA1P38398 1863 aaKnown RBP20.84■□□□□ 0.93
CTSD-205ENST00000438213 C21orf2O43822 256 aa20.84■□□□□ 0.93
CTSD-205ENST00000438213 PCCAP05165 728 aaPredicted RBP20.84■□□□□ 0.93
CTSD-205ENST00000438213 SSH1Q8WYL5 1049 aa20.84■□□□□ 0.93
CTSD-205ENST00000438213 CRAMP1Q96RY5 1269 aa20.84■□□□□ 0.93
CTSD-205ENST00000438213 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
CTSD-205ENST00000438213 IRS4O14654 1257 aaPredicted RBP20.83■□□□□ 0.93
CTSD-205ENST00000438213 IGKV5-2P06315 115 aa20.83■□□□□ 0.93
CTSD-205ENST00000438213 RTL5Q5HYW3 569 aaPredicted RBP20.83■□□□□ 0.93
CTSD-205ENST00000438213 LINS1Q8NG48 757 aa20.83■□□□□ 0.93
CTSD-205ENST00000438213 CHD4Q14839 1912 aa20.82■□□□□ 0.92
CTSD-205ENST00000438213 ARFGEF2Q9Y6D5 1785 aa20.82■□□□□ 0.92
CTSD-205ENST00000438213 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
CTSD-205ENST00000438213 NEURL1BA8MQ27 555 aa20.82■□□□□ 0.92
CTSD-205ENST00000438213 GOLGB1Q14789 3259 aaKnown RBP20.82■□□□□ 0.92
CTSD-205ENST00000438213 F6X3S4 739 aa20.81■□□□□ 0.92
CTSD-205ENST00000438213 CWF19L2Q2TBE0 894 aaKnown RBP20.81■□□□□ 0.92
CTSD-205ENST00000438213 C3orf67Q6ZVT6 689 aa20.81■□□□□ 0.92
CTSD-205ENST00000438213 DDX46Q7L014 1031 aaKnown RBP20.81■□□□□ 0.92
CTSD-205ENST00000438213 SMC4Q9NTJ3 1288 aa20.81■□□□□ 0.92
CTSD-205ENST00000438213 DLEC1Q9Y238 1755 aa20.81■□□□□ 0.92
CTSD-205ENST00000438213 ARFGEF1Q9Y6D6 1849 aa20.81■□□□□ 0.92
CTSD-205ENST00000438213 PTPRCP08575 1304 aa20.8■□□□□ 0.92
CTSD-205ENST00000438213 SF3B3Q15393 1217 aaKnown RBP20.8■□□□□ 0.92
CTSD-205ENST00000438213 C7orf43Q8WVR3 580 aa20.8■□□□□ 0.92
CTSD-205ENST00000438213 TMX4Q9H1E5 349 aaPredicted RBP20.8■□□□□ 0.92
CTSD-205ENST00000438213 BBOX1O75936 387 aa20.79■□□□□ 0.92
CTSD-205ENST00000438213 GCKRQ14397 625 aa20.79■□□□□ 0.92
CTSD-205ENST00000438213 CC2D2BQ6DHV5 1058 aa20.79■□□□□ 0.92
CTSD-205ENST00000438213 H7C1W4 665 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 PDE8AO60658 829 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 CCDC93Q567U6 631 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 BEND3Q5T5X7 828 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 SLC4A10Q6U841 1118 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 RTKN2Q8IZC4 609 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 JARID2Q92833 1246 aaPredicted RBP20.78■□□□□ 0.92
CTSD-205ENST00000438213 BCL2L13Q9BXK5 485 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 UTRNP46939 3433 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 COL11A2P13942 1736 aaPredicted RBP20.78■□□□□ 0.92
CTSD-205ENST00000438213 CDHR2Q9BYE9 1310 aa20.78■□□□□ 0.92
CTSD-205ENST00000438213 RARSP54136 660 aaKnown RBP20.77■□□□□ 0.92
CTSD-205ENST00000438213 GRIPAP1Q4V328 841 aa20.77■□□□□ 0.92
CTSD-205ENST00000438213 ALDH1L1O75891 902 aa20.76■□□□□ 0.91
CTSD-205ENST00000438213 BRPF1P55201 1214 aaPredicted RBP20.76■□□□□ 0.91
CTSD-205ENST00000438213 C9orf131Q5VYM1 1079 aa20.76■□□□□ 0.91
CTSD-205ENST00000438213 SRCIN1Q9C0H9 1055 aa20.76■□□□□ 0.91
CTSD-205ENST00000438213 SLX4Q8IY92 1834 aa20.76■□□□□ 0.91
CTSD-205ENST00000438213 TNRC6CQ9HCJ0 1690 aaKnown RBP20.75■□□□□ 0.91
CTSD-205ENST00000438213 PPEF1O14829 653 aaPredicted RBP20.75■□□□□ 0.91
CTSD-205ENST00000438213 LMNB1P20700 586 aa20.75■□□□□ 0.91
CTSD-205ENST00000438213 GRAPQ13588 217 aa20.75■□□□□ 0.91
CTSD-205ENST00000438213 CCDC152Q4G0S7 254 aa20.75■□□□□ 0.91
CTSD-205ENST00000438213 UBE3BQ7Z3V4 1068 aa20.75■□□□□ 0.91
CTSD-205ENST00000438213 GRAPLQ8TC17 118 aaPredicted RBP20.75■□□□□ 0.91
CTSD-205ENST00000438213 NFKBIEO00221 500 aa20.74■□□□□ 0.91
CTSD-205ENST00000438213 TMC4Q7Z404 712 aa20.74■□□□□ 0.91
CTSD-205ENST00000438213 TAOK3Q9H2K8 898 aa20.74■□□□□ 0.91
CTSD-205ENST00000438213 RNF181Q9P0P0 153 aa20.74■□□□□ 0.91
CTSD-205ENST00000438213 ABCC4O15439 1325 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms