RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 ABHD8Q96I13 439 aa11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 SIN3AQ96ST3 1273 aa11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.57
R3HDM1-208ENST00000438014 HSP90AB1P08238 724 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 TM4SF1P30408 202 aa11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 DDR1Q08345 913 aa11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 PADI6Q6TGC4 694 aa11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 METTL3Q86U44 580 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 TTLL6Q8N841 843 aa11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 ZNF454Q8N9F8 522 aa11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 CNTNAP1P78357 1384 aa11.51□□□□□ -0.57
R3HDM1-208ENST00000438014 POLRMTO00411 1230 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 ZPR1O75312 459 aa11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 LBX1P52954 281 aa11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 SRP68Q9UHB9 627 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 USP42Q9H9J4 1324 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 KDRP35968 1356 aa11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 TONSLQ96HA7 1378 aa11.5□□□□□ -0.57
R3HDM1-208ENST00000438014 PCNTO95613 3336 aa11.49□□□□□ -0.57
R3HDM1-208ENST00000438014 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
R3HDM1-208ENST00000438014 EYA1Q99502 592 aa11.49□□□□□ -0.57
R3HDM1-208ENST00000438014 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
R3HDM1-208ENST00000438014 PPM1GO15355 546 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 CRKLP46109 303 aaKnown RBP11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 VEGFBP49765 207 aa11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 RGS19P49795 217 aa11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 CABP4P57796 275 aa11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 FAM217BQ9NTX9 383 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
R3HDM1-208ENST00000438014 SBF1O95248 1867 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 WASHC2AQ641Q2 1341 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 H0YIN7 160 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 NUDT7P0C024 238 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 MAP2K1Q02750 393 aaPredicted RBP11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 SP7Q8TDD2 431 aaPredicted RBP11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 PXYLP1Q8TE99 480 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 EMILIN1Q9Y6C2 1016 aa11.47□□□□□ -0.57
R3HDM1-208ENST00000438014 NCAPD2Q15021 1401 aa11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 IQCA1LA6NCM1 817 aa11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 CCDC85CA6NKD9 419 aa11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 NFKBIEO00221 500 aa11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 PTCD1O75127 700 aaKnown RBP11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 C2CD5Q86YS7 1000 aa11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 TTC13Q8NBP0 860 aa11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 TESK2Q96S53 571 aa11.46□□□□□ -0.57
R3HDM1-208ENST00000438014 PASKQ96RG2 1323 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 HSPA8P11142 646 aaKnown RBP11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 PLEKHO1Q53GL0 409 aaPredicted RBP11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 LDHDQ86WU2 507 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 PDZRN3Q9UPQ7 1066 aa11.45□□□□□ -0.58
R3HDM1-208ENST00000438014 SERPINB2P05120 415 aa11.44□□□□□ -0.58
R3HDM1-208ENST00000438014 DEFB115Q30KQ5 88 aa11.44□□□□□ -0.58
R3HDM1-208ENST00000438014 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.582e-6■■□□□ 11.7
R3HDM1-208ENST00000438014 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
R3HDM1-208ENST00000438014 DDNO94850 711 aaPredicted RBP11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 PRSS12P56730 875 aa11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 NFIXQ14938 502 aa11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 INTS5Q6P9B9 1019 aaKnown RBP11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 NARFQ9UHQ1 456 aa11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 ZNF831Q5JPB2 1677 aa11.43□□□□□ -0.58
R3HDM1-208ENST00000438014 MTHFSP49914 203 aa11.42□□□□□ -0.58
R3HDM1-208ENST00000438014 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
R3HDM1-208ENST00000438014 ZNF622Q969S3 477 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■□□□□ 8.2
R3HDM1-208ENST00000438014 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 C21orf2O43822 256 aa11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 HOXB3P14651 431 aaPredicted RBP11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 PDE6BP35913 854 aa11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 ZNF530Q6P9A1 599 aaPredicted RBP11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 NFATC2IPQ8NCF5 419 aa11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 CDCA7LQ96GN5 454 aa11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 TAOK3Q9H2K8 898 aa11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 TAF1DQ9H5J8 278 aaPredicted RBP11.41□□□□□ -0.58
R3HDM1-208ENST00000438014 WDR33Q9C0J8 1336 aaKnown RBP11.4□□□□□ -0.58
R3HDM1-208ENST00000438014 C1orf141Q5JVX7 400 aa11.4□□□□□ -0.58
R3HDM1-208ENST00000438014 SOGA3Q5TF21 947 aa11.4□□□□□ -0.58
R3HDM1-208ENST00000438014 SOS1Q07889 1333 aaPredicted RBP11.39□□□□□ -0.59
R3HDM1-208ENST00000438014 EIF4A2Q14240 407 aaKnown RBP11.39□□□□□ -0.59
R3HDM1-208ENST00000438014 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
R3HDM1-208ENST00000438014 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
R3HDM1-208ENST00000438014 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
R3HDM1-208ENST00000438014 POLR3EQ9NVU0 708 aa11.39□□□□□ -0.59
R3HDM1-208ENST00000438014 MYH14Q7Z406 1995 aaKnown RBP11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 ECE1P42892 770 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms