RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PER1O15534 1290 aaPredicted RBP18.8■□□□□ 0.6
LINC01088-201ENST00000437737 EPS15P42566 896 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 SCNN1DP51172 638 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 HLFQ16534 295 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 NBPF10Q6P3W6 841 aaKnown RBP18.8■□□□□ 0.6
LINC01088-201ENST00000437737 LARGE2Q8N3Y3 721 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 NBPF15Q8N660 670 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
LINC01088-201ENST00000437737 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 TSKSQ9UJT2 592 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 LAMB4A4D0S4 1761 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 ABCC12Q96J65 1359 aa18.8■□□□□ 0.6
LINC01088-201ENST00000437737 TRAF5O00463 557 aa18.79■□□□□ 0.6
LINC01088-201ENST00000437737 USP50Q70EL3 339 aaPredicted RBP18.79■□□□□ 0.6
LINC01088-201ENST00000437737 MCM10Q7L590 875 aa18.79■□□□□ 0.6
LINC01088-201ENST00000437737 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
LINC01088-201ENST00000437737 RPGRQ92834 1020 aaKnown RBP18.79■□□□□ 0.6
LINC01088-201ENST00000437737 NYXQ9GZU5 481 aa18.79■□□□□ 0.6
LINC01088-201ENST00000437737 NUP98P52948 1817 aa18.79■□□□□ 0.6
LINC01088-201ENST00000437737 CRY2Q49AN0 593 aa18.78■□□□□ 0.6
LINC01088-201ENST00000437737 TLL2Q9Y6L7 1015 aa18.78■□□□□ 0.6
LINC01088-201ENST00000437737 AOC2O75106 756 aa18.77■□□□□ 0.6
LINC01088-201ENST00000437737 RGS19P49795 217 aa18.77■□□□□ 0.6
LINC01088-201ENST00000437737 CST9Q5W186 159 aa18.77■□□□□ 0.6
LINC01088-201ENST00000437737 NIM1KQ8IY84 436 aa18.77■□□□□ 0.6
LINC01088-201ENST00000437737 RSPH6AQ9H0K4 717 aa18.77■□□□□ 0.6
LINC01088-201ENST00000437737 TCERG1O14776 1098 aaKnown RBP18.76■□□□□ 0.59
LINC01088-201ENST00000437737 MAP2K2P36507 400 aa18.76■□□□□ 0.59
LINC01088-201ENST00000437737 GRIPAP1Q4V328 841 aa18.76■□□□□ 0.59
LINC01088-201ENST00000437737 NGEFQ8N5V2 710 aa18.76■□□□□ 0.59
LINC01088-201ENST00000437737 CASP8AP2Q9UKL3 1982 aa18.75■□□□□ 0.59
LINC01088-201ENST00000437737 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
LINC01088-201ENST00000437737 PPEF1O14829 653 aaPredicted RBP18.74■□□□□ 0.59
LINC01088-201ENST00000437737 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
LINC01088-201ENST00000437737 RBM17Q96I25 401 aaKnown RBP18.74■□□□□ 0.59
LINC01088-201ENST00000437737 NPC1L1Q9UHC9 1359 aa18.73■□□□□ 0.59
LINC01088-201ENST00000437737 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
LINC01088-201ENST00000437737 CA12O43570 354 aa18.73■□□□□ 0.59
LINC01088-201ENST00000437737 CELF2O95319 508 aaKnown RBP18.73■□□□□ 0.59
LINC01088-201ENST00000437737 HOXA10P31260 410 aaPredicted RBP18.73■□□□□ 0.59
LINC01088-201ENST00000437737 MCOLN1Q9GZU1 580 aa18.73■□□□□ 0.59
LINC01088-201ENST00000437737 TMX4Q9H1E5 349 aaPredicted RBP18.73■□□□□ 0.59
LINC01088-201ENST00000437737 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
LINC01088-201ENST00000437737 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
LINC01088-201ENST00000437737 ERVV-1B6SEH8 477 aa18.72■□□□□ 0.59
LINC01088-201ENST00000437737 GPTP24298 496 aa18.72■□□□□ 0.59
LINC01088-201ENST00000437737 KIF6Q6ZMV9 814 aa18.72■□□□□ 0.59
LINC01088-201ENST00000437737 SAPCD2Q86UD0 394 aa18.72■□□□□ 0.59
LINC01088-201ENST00000437737 GPRC5DQ9NZD1 345 aa18.72■□□□□ 0.59
LINC01088-201ENST00000437737 RIC1Q4ADV7 1423 aa18.72■□□□□ 0.59
LINC01088-201ENST00000437737 MAP3K15Q6ZN16 1313 aa18.72■□□□□ 0.59
LINC01088-201ENST00000437737 U2AF1L5P0DN76 240 aaPredicted RBP18.71■□□□□ 0.59
LINC01088-201ENST00000437737 U2AF1Q01081 240 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC01088-201ENST00000437737 AOC3Q16853 763 aa18.71■□□□□ 0.59
LINC01088-201ENST00000437737 SLC51AQ86UW1 340 aa18.71■□□□□ 0.59
LINC01088-201ENST00000437737 CRAMP1Q96RY5 1269 aa18.71■□□□□ 0.59
LINC01088-201ENST00000437737 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.59
LINC01088-201ENST00000437737 PCDH10Q9P2E7 1040 aa18.71■□□□□ 0.59
LINC01088-201ENST00000437737 IBTKQ9P2D0 1353 aaPredicted RBP18.7■□□□□ 0.58
LINC01088-201ENST00000437737 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
LINC01088-201ENST00000437737 BRPF1P55201 1214 aaPredicted RBP18.69■□□□□ 0.58
LINC01088-201ENST00000437737 DGKZQ13574 1117 aa18.69■□□□□ 0.58
LINC01088-201ENST00000437737 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
LINC01088-201ENST00000437737 ZBTB3Q9H5J0 574 aa18.69■□□□□ 0.58
LINC01088-201ENST00000437737 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
LINC01088-201ENST00000437737 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
LINC01088-201ENST00000437737 UBN2Q6ZU65 1347 aa18.69■□□□□ 0.58
LINC01088-201ENST00000437737 HTATSF1O43719 755 aaKnown RBP18.68■□□□□ 0.58
LINC01088-201ENST00000437737 MYL6BP14649 208 aa18.68■□□□□ 0.58
LINC01088-201ENST00000437737 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
LINC01088-201ENST00000437737 TTLL7Q6ZT98 887 aa18.68■□□□□ 0.58
LINC01088-201ENST00000437737 HHIPL1Q96JK4 782 aa18.68■□□□□ 0.58
LINC01088-201ENST00000437737 KDM3BQ7LBC6 1761 aa18.68■□□□□ 0.58
LINC01088-201ENST00000437737 GMPSP49915 693 aaPredicted RBP18.67■□□□□ 0.58
LINC01088-201ENST00000437737 CXCL9Q07325 125 aa18.67■□□□□ 0.58
LINC01088-201ENST00000437737 CIAPIN1Q6FI81 312 aa18.67■□□□□ 0.58
LINC01088-201ENST00000437737 SUPT20HQ8NEM7 779 aa18.67■□□□□ 0.58
LINC01088-201ENST00000437737 VPS33BQ9H267 617 aa18.67■□□□□ 0.58
LINC01088-201ENST00000437737 ZNRF3Q9ULT6 936 aa18.67■□□□□ 0.58
LINC01088-201ENST00000437737 NLRP3Q96P20 1036 aa18.66■□□□□ 0.58
LINC01088-201ENST00000437737 BCL2L13Q9BXK5 485 aa18.66■□□□□ 0.58
LINC01088-201ENST00000437737 DLG5Q8TDM6 1919 aa18.65■□□□□ 0.58
LINC01088-201ENST00000437737 NTSR2O95665 410 aa18.65■□□□□ 0.58
LINC01088-201ENST00000437737 C3orf67Q6ZVT6 689 aa18.65■□□□□ 0.58
LINC01088-201ENST00000437737 PPP1R42Q7Z4L9 355 aa18.65■□□□□ 0.58
LINC01088-201ENST00000437737 ATP6V0A2Q9Y487 856 aa18.65■□□□□ 0.58
LINC01088-201ENST00000437737 CDC37L1Q7L3B6 337 aa18.64■□□□□ 0.57
LINC01088-201ENST00000437737 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
LINC01088-201ENST00000437737 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
LINC01088-201ENST00000437737 CDHR2Q9BYE9 1310 aa18.64■□□□□ 0.57
LINC01088-201ENST00000437737 NOGQ13253 232 aa18.63■□□□□ 0.57
LINC01088-201ENST00000437737 DPP8Q6V1X1 898 aaPredicted RBP18.63■□□□□ 0.57
LINC01088-201ENST00000437737 ZC3H15Q8WU90 426 aaKnown RBP18.63■□□□□ 0.57
LINC01088-201ENST00000437737 PGAP2Q9UHJ9 254 aa18.63■□□□□ 0.57
LINC01088-201ENST00000437737 ABCC4O15439 1325 aa18.63■□□□□ 0.57
LINC01088-201ENST00000437737 RAD17O75943 681 aa18.62■□□□□ 0.57
LINC01088-201ENST00000437737 TNIP1Q15025 636 aa18.62■□□□□ 0.57
LINC01088-201ENST00000437737 PARP10Q53GL7 1025 aa18.62■□□□□ 0.57
LINC01088-201ENST00000437737 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
LINC01088-201ENST00000437737 LAMB2P55268 1798 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms