RNA–Protein interactions for RNA: ENST00000437613.1

LSG1-203, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-203ENST00000437613 PDZRN3Q9UPQ7 1066 aa12.1□□□□□ -0.47
LSG1-203ENST00000437613 PTPRCP08575 1304 aa12.1□□□□□ -0.47
LSG1-203ENST00000437613 SLC10A5Q5PT55 438 aa12.09□□□□□ -0.47
LSG1-203ENST00000437613 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
LSG1-203ENST00000437613 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
LSG1-203ENST00000437613 NOB1Q9ULX3 412 aaKnown RBP12.09□□□□□ -0.47
LSG1-203ENST00000437613 RNF123Q5XPI4 1314 aa12.09□□□□□ -0.47
LSG1-203ENST00000437613 SH3TC1Q8TE82 1336 aa12.09□□□□□ -0.47
LSG1-203ENST00000437613 IBTKQ9P2D0 1353 aaPredicted RBP12.08□□□□□ -0.48
LSG1-203ENST00000437613 IGKV5-2P06315 115 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 BRPF1P55201 1214 aaPredicted RBP12.08□□□□□ -0.48
LSG1-203ENST00000437613 GPR162Q16538 588 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 SLC4A10Q6U841 1118 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
LSG1-203ENST00000437613 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 FAM89AQ96GI7 184 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 CACNA1FO60840 1977 aa12.08□□□□□ -0.48
LSG1-203ENST00000437613 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
LSG1-203ENST00000437613 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
LSG1-203ENST00000437613 NEURL1BA8MQ27 555 aa12.07□□□□□ -0.48
LSG1-203ENST00000437613 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
LSG1-203ENST00000437613 BCAR3O75815 825 aa12.07□□□□□ -0.48
LSG1-203ENST00000437613 HCLS1P14317 486 aaPredicted RBP12.07□□□□□ -0.48
LSG1-203ENST00000437613 KCNA3P22001 575 aa12.07□□□□□ -0.48
LSG1-203ENST00000437613 CWF19L2Q2TBE0 894 aaKnown RBP12.07□□□□□ -0.48
LSG1-203ENST00000437613 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
LSG1-203ENST00000437613 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
LSG1-203ENST00000437613 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
LSG1-203ENST00000437613 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.48
LSG1-203ENST00000437613 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 PCCAP05165 728 aaPredicted RBP12.06□□□□□ -0.48
LSG1-203ENST00000437613 SRGNP10124 158 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
LSG1-203ENST00000437613 NPR1P16066 1061 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 GCKRQ14397 625 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 BEND3Q5T5X7 828 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 TTLL6Q8N841 843 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 JARID2Q92833 1246 aaPredicted RBP12.06□□□□□ -0.48
LSG1-203ENST00000437613 FRAT1Q92837 279 aaPredicted RBP12.06□□□□□ -0.48
LSG1-203ENST00000437613 MASTLQ96GX5 879 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 API5Q9BZZ5 524 aaKnown RBP12.06□□□□□ -0.48
LSG1-203ENST00000437613 PXDNLA1KZ92 1463 aa12.06□□□□□ -0.48
LSG1-203ENST00000437613 IRS4O14654 1257 aaPredicted RBP12.05□□□□□ -0.48
LSG1-203ENST00000437613 STYK1Q6J9G0 422 aa12.05□□□□□ -0.48
LSG1-203ENST00000437613 ARHGAP45Q92619 1136 aa12.05□□□□□ -0.48
LSG1-203ENST00000437613 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
LSG1-203ENST00000437613 SRCIN1Q9C0H9 1055 aa12.05□□□□□ -0.48
LSG1-203ENST00000437613 BCS1LQ9Y276 419 aa12.05□□□□□ -0.48
LSG1-203ENST00000437613 KIF16BQ96L93 1317 aa12.05□□□□□ -0.48
LSG1-203ENST00000437613 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
LSG1-203ENST00000437613 H7C1W4 665 aa12.04□□□□□ -0.48
LSG1-203ENST00000437613 GRIN3BO60391 1043 aa12.04□□□□□ -0.48
LSG1-203ENST00000437613 ALDH1L1O75891 902 aa12.04□□□□□ -0.48
LSG1-203ENST00000437613 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
LSG1-203ENST00000437613 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
LSG1-203ENST00000437613 RPGRQ92834 1020 aaKnown RBP12.04□□□□□ -0.48
LSG1-203ENST00000437613 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
LSG1-203ENST00000437613 C9orf78Q9NZ63 289 aaPredicted RBP12.04□□□□□ -0.48
LSG1-203ENST00000437613 ARFGEF2Q9Y6D5 1785 aa12.04□□□□□ -0.48
LSG1-203ENST00000437613 KIF13BQ9NQT8 1826 aa12.03□□□□□ -0.48
LSG1-203ENST00000437613 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.484e-6■□□□□ 11.2
LSG1-203ENST00000437613 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
LSG1-203ENST00000437613 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
LSG1-203ENST00000437613 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
LSG1-203ENST00000437613 PDE8AO60658 829 aa12.02□□□□□ -0.49
LSG1-203ENST00000437613 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
LSG1-203ENST00000437613 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
LSG1-203ENST00000437613 ZKSCAN2Q63HK3 967 aa12.02□□□□□ -0.49
LSG1-203ENST00000437613 ATF7IPQ6VMQ6 1270 aa12.02□□□□□ -0.49
LSG1-203ENST00000437613 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
LSG1-203ENST00000437613 CDHR2Q9BYE9 1310 aa12.02□□□□□ -0.49
LSG1-203ENST00000437613 ANKRD36CQ5JPF3 1778 aa12.02□□□□□ -0.49
LSG1-203ENST00000437613 N4BP2Q86UW6 1770 aaPredicted RBP12.01□□□□□ -0.49
LSG1-203ENST00000437613 GRM8O00222 908 aa12.01□□□□□ -0.49
LSG1-203ENST00000437613 SF3B3Q15393 1217 aaKnown RBP12.01□□□□□ -0.49
LSG1-203ENST00000437613 ARHGAP27Q6ZUM4 889 aa12.01□□□□□ -0.49
LSG1-203ENST00000437613 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
LSG1-203ENST00000437613 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
LSG1-203ENST00000437613 RIC1Q4ADV7 1423 aa12.01□□□□□ -0.49
LSG1-203ENST00000437613 BBOX1O75936 387 aa12□□□□□ -0.49
LSG1-203ENST00000437613 TRIM27P14373 513 aa12□□□□□ -0.49
LSG1-203ENST00000437613 CASP7P55210 303 aa12□□□□□ -0.49
LSG1-203ENST00000437613 CCDC152Q4G0S7 254 aa12□□□□□ -0.49
LSG1-203ENST00000437613 PRPF40BQ6NWY9 871 aaKnown RBP12□□□□□ -0.49
LSG1-203ENST00000437613 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
LSG1-203ENST00000437613 C21orf2O43822 256 aa11.99□□□□□ -0.49
LSG1-203ENST00000437613 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
LSG1-203ENST00000437613 CLUAP1Q96AJ1 413 aa11.99□□□□□ -0.49
LSG1-203ENST00000437613 CCDC85AQ96PX6 553 aaPredicted RBP11.99□□□□□ -0.49
LSG1-203ENST00000437613 PLA2G12BQ9BX93 195 aa11.99□□□□□ -0.49
LSG1-203ENST00000437613 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
LSG1-203ENST00000437613 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
LSG1-203ENST00000437613 CTSWP56202 376 aa11.98□□□□□ -0.49
LSG1-203ENST00000437613 SOGA3Q5TF21 947 aa11.98□□□□□ -0.49
LSG1-203ENST00000437613 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
LSG1-203ENST00000437613 TTLL11Q8NHH1 800 aa11.98□□□□□ -0.49
LSG1-203ENST00000437613 C7orf43Q8WVR3 580 aa11.98□□□□□ -0.49
LSG1-203ENST00000437613 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms