RNA–Protein interactions for RNA: ENST00000437597.1

LINC00884-201, long intergenic non-protein coding RNA 884, humanhuman

TSL 3

Gene LINC00884, Length 419 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-201ENST00000437597 PKN2Q16513 984 aaKnown RBP13.62□□□□□ -0.23
LINC00884-201ENST00000437597 CDC37L1Q7L3B6 337 aa13.62□□□□□ -0.23
LINC00884-201ENST00000437597 ZC3H15Q8WU90 426 aaKnown RBP13.62□□□□□ -0.23
LINC00884-201ENST00000437597 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
LINC00884-201ENST00000437597 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
LINC00884-201ENST00000437597 A1BGP04217 495 aa13.61□□□□□ -0.23
LINC00884-201ENST00000437597 GMPSP49915 693 aaPredicted RBP13.61□□□□□ -0.23
LINC00884-201ENST00000437597 CDCA8Q53HL2 280 aa13.61□□□□□ -0.23
LINC00884-201ENST00000437597 CC2D2BQ6DHV5 1058 aa13.61□□□□□ -0.23
LINC00884-201ENST00000437597 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
LINC00884-201ENST00000437597 TRPM4Q8TD43 1214 aa13.61□□□□□ -0.23
LINC00884-201ENST00000437597 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
LINC00884-201ENST00000437597 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
LINC00884-201ENST00000437597 CRY2Q49AN0 593 aa13.6□□□□□ -0.23
LINC00884-201ENST00000437597 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
LINC00884-201ENST00000437597 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
LINC00884-201ENST00000437597 CCDC102AQ96A19 550 aa13.6□□□□□ -0.23
LINC00884-201ENST00000437597 HTTP42858 3142 aa13.59□□□□□ -0.23
LINC00884-201ENST00000437597 SIPA1L3O60292 1781 aaPredicted RBP13.59□□□□□ -0.23
LINC00884-201ENST00000437597 SLC10A3P09131 477 aa13.59□□□□□ -0.23
LINC00884-201ENST00000437597 CXCL9Q07325 125 aa13.59□□□□□ -0.23
LINC00884-201ENST00000437597 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
LINC00884-201ENST00000437597 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
LINC00884-201ENST00000437597 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
LINC00884-201ENST00000437597 TEX13AQ9BXU3 409 aaPredicted RBP13.59□□□□□ -0.23
LINC00884-201ENST00000437597 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
LINC00884-201ENST00000437597 ZNF157P51786 506 aaPredicted RBP13.58□□□□□ -0.24
LINC00884-201ENST00000437597 GBA2Q9HCG7 927 aaPredicted RBP13.58□□□□□ -0.24
LINC00884-201ENST00000437597 ABCC12Q96J65 1359 aa13.58□□□□□ -0.24
LINC00884-201ENST00000437597 IL13P35225 146 aa13.57□□□□□ -0.24
LINC00884-201ENST00000437597 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
LINC00884-201ENST00000437597 ZNF296Q8WUU4 475 aaPredicted RBP13.57□□□□□ -0.24
LINC00884-201ENST00000437597 RBBP6Q7Z6E9 1792 aaKnown RBP13.57□□□□□ -0.24
LINC00884-201ENST00000437597 A0A0C4DFX4 3053 aa13.57□□□□□ -0.24
LINC00884-201ENST00000437597 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
LINC00884-201ENST00000437597 SHTN1A0MZ66 631 aa13.56□□□□□ -0.24
LINC00884-201ENST00000437597 PPIP5K2O43314 1243 aa13.56□□□□□ -0.24
LINC00884-201ENST00000437597 AOC3Q16853 763 aa13.56□□□□□ -0.24
LINC00884-201ENST00000437597 ZNF790Q6PG37 636 aa13.56□□□□□ -0.24
LINC00884-201ENST00000437597 FBXO46Q6PJ61 603 aaPredicted RBP13.56□□□□□ -0.24
LINC00884-201ENST00000437597 HDAC9Q9UKV0 1011 aa13.56□□□□□ -0.24
LINC00884-201ENST00000437597 COLQQ9Y215 455 aaPredicted RBP13.56□□□□□ -0.24
LINC00884-201ENST00000437597 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00884-201ENST00000437597 CEP290O15078 2479 aa13.55□□□□□ -0.24
LINC00884-201ENST00000437597 POLR2AP24928 1970 aaKnown RBP13.55□□□□□ -0.24
LINC00884-201ENST00000437597 BRCA2P51587 3418 aa13.55□□□□□ -0.24
LINC00884-201ENST00000437597 FAM177BA6PVY3 158 aa13.55□□□□□ -0.24
LINC00884-201ENST00000437597 HOXA10P31260 410 aaPredicted RBP13.55□□□□□ -0.24
LINC00884-201ENST00000437597 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
LINC00884-201ENST00000437597 MTHFSDQ2M296 383 aaKnown RBP13.55□□□□□ -0.24
LINC00884-201ENST00000437597 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
LINC00884-201ENST00000437597 ZNRF3Q9ULT6 936 aa13.55□□□□□ -0.24
LINC00884-201ENST00000437597 ZNF652Q9Y2D9 606 aa13.55□□□□□ -0.24
LINC00884-201ENST00000437597 PAPPA2Q9BXP8 1791 aa13.54□□□□□ -0.24
LINC00884-201ENST00000437597 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
LINC00884-201ENST00000437597 C2orf69Q8N8R5 385 aa13.54□□□□□ -0.24
LINC00884-201ENST00000437597 RGL2O15211 777 aa13.53□□□□□ -0.24
LINC00884-201ENST00000437597 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
LINC00884-201ENST00000437597 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
LINC00884-201ENST00000437597 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
LINC00884-201ENST00000437597 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
LINC00884-201ENST00000437597 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
LINC00884-201ENST00000437597 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
LINC00884-201ENST00000437597 KIAA0100Q14667 2235 aaKnown RBP13.52□□□□□ -0.24
LINC00884-201ENST00000437597 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
LINC00884-201ENST00000437597 PPEF1O14829 653 aaPredicted RBP13.52□□□□□ -0.25
LINC00884-201ENST00000437597 TBC1D8O95759 1140 aa13.52□□□□□ -0.25
LINC00884-201ENST00000437597 KRT26Q7Z3Y9 468 aa13.52□□□□□ -0.25
LINC00884-201ENST00000437597 SLC17A8Q8NDX2 589 aa13.52□□□□□ -0.25
LINC00884-201ENST00000437597 FMNL2Q96PY5 1086 aa13.52□□□□□ -0.25
LINC00884-201ENST00000437597 CENPFP49454 3210 aa13.52□□□□□ -0.25
LINC00884-201ENST00000437597 TCERG1O14776 1098 aaKnown RBP13.51□□□□□ -0.25
LINC00884-201ENST00000437597 USP16Q9Y5T5 823 aa13.51□□□□□ -0.25
LINC00884-201ENST00000437597 COL6A3P12111 3177 aa13.51□□□□□ -0.25
LINC00884-201ENST00000437597 RAD17O75943 681 aa13.5□□□□□ -0.25
LINC00884-201ENST00000437597 EGFRP00533 1210 aa13.5□□□□□ -0.25
LINC00884-201ENST00000437597 HMOX1P09601 288 aa13.5□□□□□ -0.25
LINC00884-201ENST00000437597 HLFQ16534 295 aa13.5□□□□□ -0.25
LINC00884-201ENST00000437597 NOM1Q5C9Z4 860 aaKnown RBP13.5□□□□□ -0.25
LINC00884-201ENST00000437597 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
LINC00884-201ENST00000437597 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
LINC00884-201ENST00000437597 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
LINC00884-201ENST00000437597 CRAMP1Q96RY5 1269 aa13.5□□□□□ -0.25
LINC00884-201ENST00000437597 RANBP2P49792 3224 aaKnown RBP13.5□□□□□ -0.25
LINC00884-201ENST00000437597 H7C1D1 291 aa13.49□□□□□ -0.25
LINC00884-201ENST00000437597 GPR25O00155 361 aa13.49□□□□□ -0.25
LINC00884-201ENST00000437597 KCNQ3O43525 872 aa13.49□□□□□ -0.25
LINC00884-201ENST00000437597 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
LINC00884-201ENST00000437597 TNIP1Q15025 636 aa13.49□□□□□ -0.25
LINC00884-201ENST00000437597 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
LINC00884-201ENST00000437597 IL17REQ8NFR9 667 aa13.49□□□□□ -0.25
LINC00884-201ENST00000437597 RTFDC1Q9BY42 306 aaPredicted RBP13.49□□□□□ -0.25
LINC00884-201ENST00000437597 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
LINC00884-201ENST00000437597 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
LINC00884-201ENST00000437597 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
LINC00884-201ENST00000437597 TEFQ10587 303 aa13.48□□□□□ -0.25
LINC00884-201ENST00000437597 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
LINC00884-201ENST00000437597 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
LINC00884-201ENST00000437597 TBC1D10BQ4KMP7 808 aaPredicted RBP13.47□□□□□ -0.25
LINC00884-201ENST00000437597 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms