RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 NEURL1BA8MQ27 555 aa18.62■□□□□ 0.57
SKA2-202ENST00000437036 IGKV5-2P06315 115 aa18.62■□□□□ 0.57
SKA2-202ENST00000437036 CENPBP07199 599 aaPredicted RBP18.62■□□□□ 0.57
SKA2-202ENST00000437036 ST5P78524 1137 aa18.62■□□□□ 0.57
SKA2-202ENST00000437036 CWF19L2Q2TBE0 894 aaKnown RBP18.62■□□□□ 0.57
SKA2-202ENST00000437036 SGIP1Q9BQI5 828 aa18.62■□□□□ 0.57
SKA2-202ENST00000437036 IBTKQ9P2D0 1353 aaPredicted RBP18.62■□□□□ 0.57
SKA2-202ENST00000437036 PXDNLA1KZ92 1463 aa18.61■□□□□ 0.57
SKA2-202ENST00000437036 HSP90B1P14625 803 aaKnown RBP18.61■□□□□ 0.57
SKA2-202ENST00000437036 DZIP1LQ8IYY4 767 aaKnown RBP18.61■□□□□ 0.57
SKA2-202ENST00000437036 ABCC4O15439 1325 aa18.6■□□□□ 0.57
SKA2-202ENST00000437036 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
SKA2-202ENST00000437036 CLUAP1Q96AJ1 413 aa18.6■□□□□ 0.57
SKA2-202ENST00000437036 NTSR2O95665 410 aa18.59■□□□□ 0.57
SKA2-202ENST00000437036 GCKRQ14397 625 aa18.59■□□□□ 0.57
SKA2-202ENST00000437036 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
SKA2-202ENST00000437036 ZBTB38Q8NAP3 1195 aaPredicted RBP18.59■□□□□ 0.57
SKA2-202ENST00000437036 C9orf78Q9NZ63 289 aaPredicted RBP18.59■□□□□ 0.57
SKA2-202ENST00000437036 ANKRD36CQ5JPF3 1778 aa18.58■□□□□ 0.57
SKA2-202ENST00000437036 COL24A1Q17RW2 1714 aa18.58■□□□□ 0.57
SKA2-202ENST00000437036 PLIN1O60240 522 aa18.58■□□□□ 0.56
SKA2-202ENST00000437036 PCCAP05165 728 aaPredicted RBP18.58■□□□□ 0.56
SKA2-202ENST00000437036 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
SKA2-202ENST00000437036 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
SKA2-202ENST00000437036 ERFEQ4G0M1 354 aa18.57■□□□□ 0.56
SKA2-202ENST00000437036 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
SKA2-202ENST00000437036 FAM89AQ96GI7 184 aa18.57■□□□□ 0.56
SKA2-202ENST00000437036 GRM8O00222 908 aa18.56■□□□□ 0.56
SKA2-202ENST00000437036 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
SKA2-202ENST00000437036 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
SKA2-202ENST00000437036 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
SKA2-202ENST00000437036 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
SKA2-202ENST00000437036 CD2APQ9Y5K6 639 aa18.56■□□□□ 0.56
SKA2-202ENST00000437036 H7C1W4 665 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 IRS4O14654 1257 aaPredicted RBP18.55■□□□□ 0.56
SKA2-202ENST00000437036 PDE6BP35913 854 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
SKA2-202ENST00000437036 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 UBE3BQ7Z3V4 1068 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 ITPRIPQ8IWB1 547 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 CCDC24Q8N4L8 307 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 TMEM57Q8N5G2 664 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
SKA2-202ENST00000437036 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
SKA2-202ENST00000437036 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
SKA2-202ENST00000437036 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
SKA2-202ENST00000437036 C10orf71Q711Q0 1435 aa18.53■□□□□ 0.56
SKA2-202ENST00000437036 CHMP4BQ9H444 224 aaKnown RBP18.53■□□□□ 0.56
SKA2-202ENST00000437036 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
SKA2-202ENST00000437036 NRXN2Q9P2S2 1712 aa18.52■□□□□ 0.56
SKA2-202ENST00000437036 GNAI3P08754 354 aa18.52■□□□□ 0.56
SKA2-202ENST00000437036 RLBP1P12271 317 aa18.52■□□□□ 0.56
SKA2-202ENST00000437036 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.56
SKA2-202ENST00000437036 TGFB2P61812 414 aa18.52■□□□□ 0.56
SKA2-202ENST00000437036 SYNE4Q8N205 404 aa18.52■□□□□ 0.56
SKA2-202ENST00000437036 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
SKA2-202ENST00000437036 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
SKA2-202ENST00000437036 RIC1Q4ADV7 1423 aa18.51■□□□□ 0.55
SKA2-202ENST00000437036 H0YIN7 160 aa18.51■□□□□ 0.55
SKA2-202ENST00000437036 PDE8AO60658 829 aa18.51■□□□□ 0.55
SKA2-202ENST00000437036 UBTFL1P0CB47 393 aaPredicted RBP18.51■□□□□ 0.55
SKA2-202ENST00000437036 USP44Q9H0E7 712 aa18.51■□□□□ 0.55
SKA2-202ENST00000437036 ABCC12Q96J65 1359 aa18.51■□□□□ 0.55
SKA2-202ENST00000437036 UTYO14607 1347 aa18.5■□□□□ 0.55
SKA2-202ENST00000437036 LRP5O75197 1615 aa18.5■□□□□ 0.55
SKA2-202ENST00000437036 CASP7P55210 303 aa18.5■□□□□ 0.55
SKA2-202ENST00000437036 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
SKA2-202ENST00000437036 C2CD5Q86YS7 1000 aa18.5■□□□□ 0.55
SKA2-202ENST00000437036 FHDC1Q9C0D6 1143 aaPredicted RBP18.5■□□□□ 0.55
SKA2-202ENST00000437036 NBPF7P0C2Y1 421 aaPredicted RBP18.49■□□□□ 0.55
SKA2-202ENST00000437036 RPGRQ92834 1020 aaKnown RBP18.49■□□□□ 0.55
SKA2-202ENST00000437036 PLA2G12BQ9BX93 195 aa18.49■□□□□ 0.55
SKA2-202ENST00000437036 DDX19BQ9UMR2 479 aa18.49■□□□□ 0.55
SKA2-202ENST00000437036 COG6Q9Y2V7 657 aa18.49■□□□□ 0.55
SKA2-202ENST00000437036 KLRG2A4D1S0 409 aaPredicted RBP18.48■□□□□ 0.55
SKA2-202ENST00000437036 CCDC152Q4G0S7 254 aa18.48■□□□□ 0.55
SKA2-202ENST00000437036 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
SKA2-202ENST00000437036 NPR1P16066 1061 aa18.47■□□□□ 0.55
SKA2-202ENST00000437036 CTSWP56202 376 aa18.47■□□□□ 0.55
SKA2-202ENST00000437036 SF3B3Q15393 1217 aaKnown RBP18.47■□□□□ 0.55
SKA2-202ENST00000437036 MEIS3Q99687 375 aa18.47■□□□□ 0.55
SKA2-202ENST00000437036 SYT17Q9BSW7 474 aa18.47■□□□□ 0.55
SKA2-202ENST00000437036 N4BP2Q86UW6 1770 aaPredicted RBP18.46■□□□□ 0.55
SKA2-202ENST00000437036 A0A0G2JLW4 131 aa18.46■□□□□ 0.55
SKA2-202ENST00000437036 GNAI2P04899 355 aa18.46■□□□□ 0.55
SKA2-202ENST00000437036 SRGNP10124 158 aa18.46■□□□□ 0.55
SKA2-202ENST00000437036 DPEP1P16444 411 aa18.46■□□□□ 0.55
SKA2-202ENST00000437036 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
SKA2-202ENST00000437036 ZNF622Q969S3 477 aaKnown RBP eCLIP18.46■□□□□ 0.55
SKA2-202ENST00000437036 MASTLQ96GX5 879 aa18.46■□□□□ 0.55
SKA2-202ENST00000437036 RBM17Q96I25 401 aaKnown RBP18.46■□□□□ 0.55
SKA2-202ENST00000437036 SUCLG2Q96I99 432 aa18.46■□□□□ 0.55
SKA2-202ENST00000437036 ZBTB7BO15156 539 aaPredicted RBP18.45■□□□□ 0.54
SKA2-202ENST00000437036 CHRNA5P30532 468 aa18.45■□□□□ 0.54
SKA2-202ENST00000437036 STYK1Q6J9G0 422 aa18.45■□□□□ 0.54
SKA2-202ENST00000437036 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
SKA2-202ENST00000437036 ALDH1B1P30837 517 aa18.44■□□□□ 0.54
SKA2-202ENST00000437036 C3orf67Q6ZVT6 689 aa18.44■□□□□ 0.54
SKA2-202ENST00000437036 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 542.5 ms