RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 METRNQ9UJH8 293 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 NOB1Q9ULX3 412 aaKnown RBP9□□□□□ -0.97
LSM3P3-201ENST00000436601 USP16Q9Y5T5 823 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 KCPQ6ZWJ8 1503 aa9□□□□□ -0.97
LSM3P3-201ENST00000436601 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 A6NJR5 290 aa8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 OATP04181 439 aa8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 EIF2S2P20042 333 aaKnown RBP8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 SSTR3P32745 418 aaPredicted RBP8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 MDM2Q00987 491 aaPredicted RBP8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 CCDC30Q5VVM6 783 aa8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 SLC4A9Q96Q91 983 aa8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 TNNQ9UQP3 1299 aa8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 PCDHGA4Q9Y5G9 962 aa8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 KDM3BQ7LBC6 1761 aa8.99□□□□□ -0.97
LSM3P3-201ENST00000436601 RGS12O14924 1447 aa8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 SKIV2LQ15477 1246 aaKnown RBP8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 ZKSCAN2Q63HK3 967 aa8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 FAM196AQ6ZSG2 479 aa8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 G2E3Q7L622 706 aa8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 ARHGAP45Q92619 1136 aa8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 CHPF2Q9P2E5 772 aa8.98□□□□□ -0.97
LSM3P3-201ENST00000436601 RLBP1P12271 317 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 TRIM27P14373 513 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 PROSER3Q2NL68 480 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 TSR1Q2NL82 804 aaKnown RBP8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 ATF7IPQ6VMQ6 1270 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 DNAJC10Q8IXB1 793 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 STK31Q9BXU1 1019 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 RBM27Q9P2N5 1060 aaKnown RBP8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 DBF4Q9UBU7 674 aaPredicted RBP8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 KIF16BQ96L93 1317 aa8.97□□□□□ -0.97
LSM3P3-201ENST00000436601 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 LOC102724428A0A0B4J2F2 783 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 NBPF26B4DH59 902 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 IPO8O15397 1037 aaKnown RBP8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 ANXA1P04083 346 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 NEFLP07196 543 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 CANXP27824 592 aaKnown RBP8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 SIK1P57059 783 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 NBPF14Q5TI25 921 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 NBPF10Q6P3W6 841 aaKnown RBP8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 METTL3Q86U44 580 aaKnown RBP8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 NBPF15Q8N660 670 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 PANK1Q8TE04 598 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 SMARCC1Q92922 1105 aaPredicted RBP8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 CLUAP1Q96AJ1 413 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 PHAXQ9H814 394 aaKnown RBP8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 DDX21Q9NR30 783 aaKnown RBP eCLIP8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 PALLDQ8WX93 1383 aa8.96□□□□□ -0.98
LSM3P3-201ENST00000436601 DOT1LQ8TEK3 1739 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 TRIM37O94972 964 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 A1BGP04217 495 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 CYP19A1P11511 503 aaPredicted RBP8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 PIP4K2AP48426 406 aaPredicted RBP8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 ITPK1Q13572 414 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 DZIP1LQ8IYY4 767 aaKnown RBP8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 EXOC6Q8TAG9 804 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 CRBNQ96SW2 442 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 BEGAINQ9BUH8 593 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 TEX13AQ9BXU3 409 aaPredicted RBP8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 API5Q9BZZ5 524 aaKnown RBP8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 C1orf115Q9H7X2 142 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 PTPRCP08575 1304 aa8.95□□□□□ -0.98
LSM3P3-201ENST00000436601 APBB1O00213 710 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 MYL6BP14649 208 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 ATP6V1AP38606 617 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 FOSBP53539 338 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 MCM6Q14566 821 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 HYPKQ9NX55 129 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 COG6Q9Y2V7 657 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
LSM3P3-201ENST00000436601 F6X3S4 739 aa8.93□□□□□ -0.98
LSM3P3-201ENST00000436601 STARD3NLO95772 234 aa8.93□□□□□ -0.98
LSM3P3-201ENST00000436601 KCNQ4P56696 695 aa8.93□□□□□ -0.98
LSM3P3-201ENST00000436601 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
LSM3P3-201ENST00000436601 TMEM57Q8N5G2 664 aa8.93□□□□□ -0.98
LSM3P3-201ENST00000436601 ABCC4O15439 1325 aa8.93□□□□□ -0.98
LSM3P3-201ENST00000436601 UBR2Q8IWV8 1755 aa8.93□□□□□ -0.98
LSM3P3-201ENST00000436601 NHSQ6T4R5 1651 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 FKBP5Q13451 457 aaPredicted RBP8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 MVPQ14764 893 aaKnown RBP8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 C6orf132Q5T0Z8 1188 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 ERICH6BQ5W0A0 696 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 INTS3Q68E01 1043 aaKnown RBP8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 COPS6Q7L5N1 327 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 FTSJ3Q8IY81 847 aaKnown RBP8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 TTC13Q8NBP0 860 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 LINC00116Q8NCU8 138 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 PXYLP1Q8TE99 480 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 XAGE3Q8WTP9 111 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 ADGRG1Q9Y653 693 aa8.92□□□□□ -0.98
LSM3P3-201ENST00000436601 ITGB4P16144 1822 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms