RNA–Protein interactions for RNA: ENST00000436359.1

AP001048.1-201, humanhuman

TSL 2 BASIC

Gene AP001048.1, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001048.1-201ENST00000436359 POLR2AP24928 1970 aaKnown RBP9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 ZNF609O15014 1411 aa9.59□□□□□ -0.87
AP001048.1-201ENST00000436359 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
AP001048.1-201ENST00000436359 IARSP41252 1262 aaKnown RBP9.59□□□□□ -0.87
AP001048.1-201ENST00000436359 PARP10Q53GL7 1025 aa9.59□□□□□ -0.87
AP001048.1-201ENST00000436359 CRAMP1Q96RY5 1269 aa9.59□□□□□ -0.87
AP001048.1-201ENST00000436359 THUMPD2Q9BTF0 503 aaKnown RBP9.59□□□□□ -0.87
AP001048.1-201ENST00000436359 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
AP001048.1-201ENST00000436359 HOXB7P09629 217 aa9.58□□□□□ -0.88
AP001048.1-201ENST00000436359 SLC10A5Q5PT55 438 aa9.58□□□□□ -0.88
AP001048.1-201ENST00000436359 OLFM4Q6UX06 510 aa9.58□□□□□ -0.88
AP001048.1-201ENST00000436359 GPC2Q8N158 579 aa9.58□□□□□ -0.88
AP001048.1-201ENST00000436359 RTFDC1Q9BY42 306 aaPredicted RBP9.58□□□□□ -0.88
AP001048.1-201ENST00000436359 MIS18AQ9NYP9 233 aa9.58□□□□□ -0.88
AP001048.1-201ENST00000436359 SPEF2Q9C093 1822 aa9.58□□□□□ -0.88
AP001048.1-201ENST00000436359 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 CDHR2Q9BYE9 1310 aa9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 MAPK8IP3Q9UPT6 1336 aa9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 NEFMP07197 916 aa9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 TMPOP42166 694 aaKnown RBP9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 LMOD3Q0VAK6 560 aa9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 COL13A1Q5TAT6 717 aaPredicted RBP9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 SUSD4Q5VX71 490 aa9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 KIF6Q6ZMV9 814 aa9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 VPS33BQ9H267 617 aa9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 ZNF277Q9NRM2 450 aaPredicted RBP9.57□□□□□ -0.88
AP001048.1-201ENST00000436359 RASSF10A6NK89 507 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 CHL1O00533 1208 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 NPHP1O15259 732 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 HSPA1AP0DMV8 641 aaKnown RBP9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 HSPA1BP0DMV9 641 aaKnown RBP9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 SCNN1DP51172 638 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 PROSER3Q2NL68 480 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 NUTM1Q86Y26 1132 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 HACL1Q9UJ83 578 aa9.56□□□□□ -0.88
AP001048.1-201ENST00000436359 ECM29Q5VYK3 1845 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 EPHX2P34913 555 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 SLC51AQ86UW1 340 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 PNMA8AQ86V59 439 aaPredicted RBP9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 SYNE4Q8N205 404 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 ZBTB3Q9H5J0 574 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 TRIM35Q9UPQ4 493 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 ABCC4O15439 1325 aa9.55□□□□□ -0.88
AP001048.1-201ENST00000436359 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
AP001048.1-201ENST00000436359 HSP90AB3PQ58FF7 597 aa9.54□□□□□ -0.88
AP001048.1-201ENST00000436359 PPP1R42Q7Z4L9 355 aa9.54□□□□□ -0.88
AP001048.1-201ENST00000436359 NLRP10Q86W26 655 aa9.54□□□□□ -0.88
AP001048.1-201ENST00000436359 DDX21Q9NR30 783 aaKnown RBP eCLIP9.54□□□□□ -0.88
AP001048.1-201ENST00000436359 ATP6V0A2Q9Y487 856 aa9.54□□□□□ -0.88
AP001048.1-201ENST00000436359 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
AP001048.1-201ENST00000436359 ZNF853P0CG23 659 aa9.53□□□□□ -0.88
AP001048.1-201ENST00000436359 MYL6BP14649 208 aa9.53□□□□□ -0.88
AP001048.1-201ENST00000436359 GPTP24298 496 aa9.53□□□□□ -0.88
AP001048.1-201ENST00000436359 RIPK4P57078 832 aa9.53□□□□□ -0.88
AP001048.1-201ENST00000436359 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
AP001048.1-201ENST00000436359 RRP7AQ9Y3A4 280 aaKnown RBP9.53□□□□□ -0.88
AP001048.1-201ENST00000436359 AKAP11Q9UKA4 1901 aa9.52□□□□□ -0.88
AP001048.1-201ENST00000436359 KIAA2012Q0VF49 1180 aa9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 TRIM28Q13263 835 aaKnown RBP9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 TCIRG1Q13488 830 aa9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 TMC4Q7Z404 712 aa9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 JDP2Q8WYK2 163 aa9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 RBM17Q96I25 401 aaKnown RBP9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 ISCA1Q9BUE6 129 aa9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 UTP14AQ9BVJ6 771 aaKnown RBP9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 PRDM10Q9NQV6 1147 aa9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 PGAP2Q9UHJ9 254 aa9.52□□□□□ -0.89
AP001048.1-201ENST00000436359 ARAP2Q8WZ64 1704 aa9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 FAM177BA6PVY3 158 aa9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 USP50Q70EL3 339 aaPredicted RBP9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 RUNDC1Q96C34 613 aa9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 WBP1LQ9NX94 342 aa9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 SH3TC1Q8TE82 1336 aa9.51□□□□□ -0.89
AP001048.1-201ENST00000436359 ANXA1P04083 346 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 GTF2E1P29083 439 aaPredicted RBP9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 EIF6P56537 245 aaKnown RBP9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 GRAPQ13588 217 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 SF3B3Q15393 1217 aaKnown RBP9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 KRT24Q2M2I5 525 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 COPS6Q7L5N1 327 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 SP8Q8IXZ3 490 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 CNTROBQ8N137 903 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 PLBD2Q8NHP8 589 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 GRAPLQ8TC17 118 aaPredicted RBP9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 GPRC5DQ9NZD1 345 aa9.5□□□□□ -0.89
AP001048.1-201ENST00000436359 FOXN1O15353 648 aa9.49□□□□□ -0.89
AP001048.1-201ENST00000436359 BBOX1O75936 387 aa9.49□□□□□ -0.89
AP001048.1-201ENST00000436359 VEGFBP49765 207 aa9.49□□□□□ -0.89
AP001048.1-201ENST00000436359 NIM1KQ8IY84 436 aa9.49□□□□□ -0.89
AP001048.1-201ENST00000436359 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
AP001048.1-201ENST00000436359 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
AP001048.1-201ENST00000436359 SUPT20HQ8NEM7 779 aa9.49□□□□□ -0.89
AP001048.1-201ENST00000436359 HHIPL1Q96JK4 782 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms