RNA–Protein interactions for RNA: ENST00000436280.5

GPN1-204, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2

Gene GPN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-204ENST00000436280 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
GPN1-204ENST00000436280 RPGRQ92834 1020 aaKnown RBP18.13■□□□□ 0.49
GPN1-204ENST00000436280 KIF3CO14782 793 aa18.12■□□□□ 0.49
GPN1-204ENST00000436280 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
GPN1-204ENST00000436280 SLX4Q8IY92 1834 aa18.12■□□□□ 0.49
GPN1-204ENST00000436280 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
GPN1-204ENST00000436280 ELL2O00472 640 aaPredicted RBP18.11■□□□□ 0.49
GPN1-204ENST00000436280 NLRP10Q86W26 655 aa18.11■□□□□ 0.49
GPN1-204ENST00000436280 C7orf43Q8WVR3 580 aa18.11■□□□□ 0.49
GPN1-204ENST00000436280 NLRP3Q96P20 1036 aa18.11■□□□□ 0.49
GPN1-204ENST00000436280 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
GPN1-204ENST00000436280 DICER1Q9UPY3 1922 aaKnown RBP18.11■□□□□ 0.49
GPN1-204ENST00000436280 TNRC6CQ9HCJ0 1690 aaKnown RBP18.1■□□□□ 0.49
GPN1-204ENST00000436280 IL16Q14005 1332 aa18.1■□□□□ 0.49
GPN1-204ENST00000436280 SENP3-EIF4A1A0A087X0R7 540 aa18.1■□□□□ 0.49
GPN1-204ENST00000436280 PRELPP51888 382 aa18.1■□□□□ 0.49
GPN1-204ENST00000436280 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
GPN1-204ENST00000436280 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
GPN1-204ENST00000436280 RBM17Q96I25 401 aaKnown RBP18.1■□□□□ 0.49
GPN1-204ENST00000436280 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
GPN1-204ENST00000436280 HOXA10P31260 410 aaPredicted RBP18.09■□□□□ 0.49
GPN1-204ENST00000436280 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
GPN1-204ENST00000436280 SLC10A5Q5PT55 438 aa18.09■□□□□ 0.49
GPN1-204ENST00000436280 C16orf71Q8IYS4 520 aaPredicted RBP18.09■□□□□ 0.49
GPN1-204ENST00000436280 C8orf58Q8NAV2 365 aa18.09■□□□□ 0.49
GPN1-204ENST00000436280 TRMT112Q9UI30 125 aaKnown RBP18.09■□□□□ 0.49
GPN1-204ENST00000436280 SH3TC1Q8TE82 1336 aa18.08■□□□□ 0.49
GPN1-204ENST00000436280 TOMM70O94826 608 aa18.08■□□□□ 0.48
GPN1-204ENST00000436280 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.48
GPN1-204ENST00000436280 DPY19L2Q6NUT2 758 aa18.08■□□□□ 0.48
GPN1-204ENST00000436280 CRAMP1Q96RY5 1269 aa18.08■□□□□ 0.48
GPN1-204ENST00000436280 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
GPN1-204ENST00000436280 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
GPN1-204ENST00000436280 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
GPN1-204ENST00000436280 FAM9BQ8IZU0 186 aa18.07■□□□□ 0.48
GPN1-204ENST00000436280 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
GPN1-204ENST00000436280 DDX58O95786 925 aaKnown RBP18.06■□□□□ 0.48
GPN1-204ENST00000436280 GRIPAP1Q4V328 841 aa18.06■□□□□ 0.48
GPN1-204ENST00000436280 WDR63Q8IWG1 891 aa18.06■□□□□ 0.48
GPN1-204ENST00000436280 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
GPN1-204ENST00000436280 LAMB2P55268 1798 aa18.05■□□□□ 0.48
GPN1-204ENST00000436280 ISCA1Q9BUE6 129 aa18.05■□□□□ 0.48
GPN1-204ENST00000436280 STK31Q9BXU1 1019 aa18.05■□□□□ 0.48
GPN1-204ENST00000436280 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
GPN1-204ENST00000436280 RRAGCQ9HB90 399 aa18.05■□□□□ 0.48
GPN1-204ENST00000436280 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
GPN1-204ENST00000436280 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
GPN1-204ENST00000436280 PPEF1O14829 653 aaPredicted RBP18.04■□□□□ 0.48
GPN1-204ENST00000436280 TRIM28Q13263 835 aaKnown RBP18.04■□□□□ 0.48
GPN1-204ENST00000436280 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
GPN1-204ENST00000436280 C3orf67Q6ZVT6 689 aa18.04■□□□□ 0.48
GPN1-204ENST00000436280 TSPYL6Q8N831 410 aa18.04■□□□□ 0.48
GPN1-204ENST00000436280 HCLS1P14317 486 aaPredicted RBP18.03■□□□□ 0.48
GPN1-204ENST00000436280 OLFM4Q6UX06 510 aa18.03■□□□□ 0.48
GPN1-204ENST00000436280 RBM46Q8TBY0 533 aaKnown RBP18.03■□□□□ 0.48
GPN1-204ENST00000436280 PSMD1Q99460 953 aa18.03■□□□□ 0.48
GPN1-204ENST00000436280 VEGFAP15692 232 aaPredicted RBP18.02■□□□□ 0.48
GPN1-204ENST00000436280 HSPA6P17066 643 aa18.02■□□□□ 0.48
GPN1-204ENST00000436280 DDX46Q7L014 1031 aaKnown RBP18.02■□□□□ 0.48
GPN1-204ENST00000436280 ZNF277Q9NRM2 450 aaPredicted RBP18.02■□□□□ 0.48
GPN1-204ENST00000436280 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
GPN1-204ENST00000436280 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
GPN1-204ENST00000436280 SYNE4Q8N205 404 aa18.01■□□□□ 0.47
GPN1-204ENST00000436280 FAM89AQ96GI7 184 aa18.01■□□□□ 0.47
GPN1-204ENST00000436280 ABCC4O15439 1325 aa18■□□□□ 0.47
GPN1-204ENST00000436280 BBOX1O75936 387 aa18■□□□□ 0.47
GPN1-204ENST00000436280 IARSP41252 1262 aaKnown RBP18■□□□□ 0.47
GPN1-204ENST00000436280 MYD88Q99836 296 aa18■□□□□ 0.47
GPN1-204ENST00000436280 ATP6V0A2Q9Y487 856 aa18■□□□□ 0.47
GPN1-204ENST00000436280 SNED1Q8TER0 1413 aa17.99■□□□□ 0.47
GPN1-204ENST00000436280 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
GPN1-204ENST00000436280 FSTL1Q12841 308 aa17.99■□□□□ 0.47
GPN1-204ENST00000436280 ZBTB38Q8NAP3 1195 aaPredicted RBP17.99■□□□□ 0.47
GPN1-204ENST00000436280 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
GPN1-204ENST00000436280 JDP2Q8WYK2 163 aa17.99■□□□□ 0.47
GPN1-204ENST00000436280 METTL22Q9BUU2 404 aaPredicted RBP17.99■□□□□ 0.47
GPN1-204ENST00000436280 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
GPN1-204ENST00000436280 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
GPN1-204ENST00000436280 GRAPQ13588 217 aa17.98■□□□□ 0.47
GPN1-204ENST00000436280 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
GPN1-204ENST00000436280 TMC4Q7Z404 712 aa17.98■□□□□ 0.47
GPN1-204ENST00000436280 GRAPLQ8TC17 118 aaPredicted RBP17.98■□□□□ 0.47
GPN1-204ENST00000436280 ZNF428Q96B54 188 aa17.98■□□□□ 0.47
GPN1-204ENST00000436280 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
GPN1-204ENST00000436280 IRS4O14654 1257 aaPredicted RBP17.97■□□□□ 0.47
GPN1-204ENST00000436280 NEXNQ0ZGT2 675 aa17.97■□□□□ 0.47
GPN1-204ENST00000436280 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
GPN1-204ENST00000436280 SP8Q8IXZ3 490 aa17.97■□□□□ 0.47
GPN1-204ENST00000436280 SMC1BQ8NDV3 1235 aa17.97■□□□□ 0.47
GPN1-204ENST00000436280 CWC25Q9NXE8 425 aaPredicted RBP17.97■□□□□ 0.47
GPN1-204ENST00000436280 DDX60Q8IY21 1712 aaKnown RBP17.97■□□□□ 0.47
GPN1-204ENST00000436280 WDR90Q96KV7 1748 aa17.97■□□□□ 0.47
GPN1-204ENST00000436280 PI4KAP2A4QPH2 592 aa17.96■□□□□ 0.47
GPN1-204ENST00000436280 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.47
GPN1-204ENST00000436280 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
GPN1-204ENST00000436280 PI4KAP1Q8N8J0 262 aa17.96■□□□□ 0.47
GPN1-204ENST00000436280 SUPT20HQ8NEM7 779 aa17.96■□□□□ 0.47
GPN1-204ENST00000436280 CACNA1FO60840 1977 aa17.96■□□□□ 0.47
GPN1-204ENST00000436280 TAF1P21675 1872 aa17.95■□□□□ 0.46
GPN1-204ENST00000436280 IQCA1LA6NCM1 817 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms