RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TRIM5Q9C035 493 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
NEDD4-202ENST00000435532 ADGRL2O95490 1459 aa18.22■□□□□ 0.51
NEDD4-202ENST00000435532 APBA3O96018 575 aa18.22■□□□□ 0.51
NEDD4-202ENST00000435532 NAA16Q6N069 864 aaPredicted RBP18.22■□□□□ 0.51
NEDD4-202ENST00000435532 RUFY1Q96T51 708 aa18.22■□□□□ 0.51
NEDD4-202ENST00000435532 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
NEDD4-202ENST00000435532 HMGN5P82970 282 aaKnown RBP18.22■□□□□ 0.51
NEDD4-202ENST00000435532 PPFIBP1Q86W92 1011 aa18.22■□□□□ 0.51
NEDD4-202ENST00000435532 SNRKQ9NRH2 765 aa18.22■□□□□ 0.51
NEDD4-202ENST00000435532 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
NEDD4-202ENST00000435532 SERPINC1P01008 464 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 ZNF772Q68DY9 489 aaPredicted RBP18.21■□□□□ 0.51
NEDD4-202ENST00000435532 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 F8W031 263 aaPredicted RBP18.21■□□□□ 0.51
NEDD4-202ENST00000435532 KIF20AO95235 890 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 CCDC192P0DO97 292 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 KRT23Q9C075 422 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 LMBR1LQ6UX01 489 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
NEDD4-202ENST00000435532 TMEM67Q5HYA8 995 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 MNS1Q8NEH6 495 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 LINS1Q8NG48 757 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 VEZTQ9HBM0 779 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 TSPY3P0CV98 308 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 TSPY8P0CW00 308 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 TSG101Q99816 390 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 DEF6Q9H4E7 631 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
NEDD4-202ENST00000435532 GRM1Q13255 1194 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 MYO5CQ9NQX4 1742 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 JARID2Q92833 1246 aaPredicted RBP18.2■□□□□ 0.5
NEDD4-202ENST00000435532 C8orf76Q96K31 380 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 HMG20BQ9P0W2 317 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 ACBD3Q9H3P7 528 aa18.2■□□□□ 0.5
NEDD4-202ENST00000435532 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
NEDD4-202ENST00000435532 H0YIN7 160 aa18.19■□□□□ 0.5
NEDD4-202ENST00000435532 CNNM2Q9H8M5 875 aa18.19■□□□□ 0.5
NEDD4-202ENST00000435532 CCDC150Q8NCX0 1101 aa18.18■□□□□ 0.5
NEDD4-202ENST00000435532 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
NEDD4-202ENST00000435532 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
NEDD4-202ENST00000435532 TRPC5Q9UL62 973 aaPredicted RBP18.18■□□□□ 0.5
NEDD4-202ENST00000435532 EIF6P56537 245 aaKnown RBP18.18■□□□□ 0.5
NEDD4-202ENST00000435532 GNAT2P19087 354 aa18.17■□□□□ 0.5
NEDD4-202ENST00000435532 CAVIN1Q6NZI2 390 aaKnown RBP18.17■□□□□ 0.5
NEDD4-202ENST00000435532 SLC4A4Q9Y6R1 1079 aa18.17■□□□□ 0.5
NEDD4-202ENST00000435532 NEBLO76041 1014 aa18.17■□□□□ 0.5
NEDD4-202ENST00000435532 RHPN1Q8TCX5 695 aa18.17■□□□□ 0.5
NEDD4-202ENST00000435532 RBM26Q5T8P6 1007 aaKnown RBP18.16■□□□□ 0.5
NEDD4-202ENST00000435532 TMTC2Q8N394 836 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 PICALMQ13492 652 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 IL27Q8NEV9 243 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 PDE6BP35913 854 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 GNAQP50148 359 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 HOOK2Q96ED9 719 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 SAMD9Q5K651 1589 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 ESR2Q92731 530 aa18.16■□□□□ 0.5
NEDD4-202ENST00000435532 MAGEB6P1A0A0J9YX57 407 aa18.15■□□□□ 0.5
NEDD4-202ENST00000435532 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
NEDD4-202ENST00000435532 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
NEDD4-202ENST00000435532 FGFR1OPO95684 399 aaKnown RBP18.15■□□□□ 0.5
NEDD4-202ENST00000435532 STXBP4Q6ZWJ1 553 aa18.15■□□□□ 0.5
NEDD4-202ENST00000435532 CIZ1Q9ULV3 898 aaPredicted RBP18.15■□□□□ 0.5
NEDD4-202ENST00000435532 CCDC83Q8IWF9 413 aa18.15■□□□□ 0.5
NEDD4-202ENST00000435532 ARGLU1Q9NWB6 273 aaPredicted RBP18.15■□□□□ 0.5
NEDD4-202ENST00000435532 MAST3O60307 1309 aa18.14■□□□□ 0.49
NEDD4-202ENST00000435532 LDHBP07195 334 aaKnown RBP18.14■□□□□ 0.49
NEDD4-202ENST00000435532 VAT1LQ9HCJ6 419 aa18.14■□□□□ 0.49
NEDD4-202ENST00000435532 GJA3Q9Y6H8 435 aa18.14■□□□□ 0.49
NEDD4-202ENST00000435532 YEATS2Q9ULM3 1422 aa18.14■□□□□ 0.49
NEDD4-202ENST00000435532 SEPT11Q9NVA2 429 aaKnown RBP18.14■□□□□ 0.49
NEDD4-202ENST00000435532 PYM1Q9BRP8 204 aaKnown RBP18.14■□□□□ 0.49
NEDD4-202ENST00000435532 PLEKHG1Q9ULL1 1385 aa18.14■□□□□ 0.49
NEDD4-202ENST00000435532 KDM5DQ9BY66 1539 aa18.14■□□□□ 0.49
NEDD4-202ENST00000435532 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
NEDD4-202ENST00000435532 IARSP41252 1262 aaKnown RBP18.13■□□□□ 0.49
NEDD4-202ENST00000435532 CALML4Q96GE6 196 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 TTLL5Q6EMB2 1281 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
NEDD4-202ENST00000435532 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 DENND2AQ9ULE3 1009 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEDD4-202ENST00000435532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEDD4-202ENST00000435532 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
NEDD4-202ENST00000435532 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 ZNF790Q6PG37 636 aa18.13■□□□□ 0.49
NEDD4-202ENST00000435532 WTAPQ15007 396 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 LRRC27Q9C0I9 530 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 EFCAB6Q5THR3 1501 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 MCM5P33992 734 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 STX8Q9UNK0 236 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.49
NEDD4-202ENST00000435532 AMPD3Q01432 767 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 TRAK2O60296 914 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms