RNA–Protein interactions for RNA: ENST00000435305.1

PTPA-219, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-219ENST00000435305 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
PTPA-219ENST00000435305 RBM46Q8TBY0 533 aaKnown RBP16.42■□□□□ 0.22
PTPA-219ENST00000435305 XAGE3Q8WTP9 111 aa16.42■□□□□ 0.22
PTPA-219ENST00000435305 UTP14AQ9BVJ6 771 aaKnown RBP16.42■□□□□ 0.22
PTPA-219ENST00000435305 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
PTPA-219ENST00000435305 VEGFAP15692 232 aaPredicted RBP16.41■□□□□ 0.22
PTPA-219ENST00000435305 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
PTPA-219ENST00000435305 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
PTPA-219ENST00000435305 RBM17Q96I25 401 aaKnown RBP16.41■□□□□ 0.22
PTPA-219ENST00000435305 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
PTPA-219ENST00000435305 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
PTPA-219ENST00000435305 ANKRD36CQ5JPF3 1778 aa16.41■□□□□ 0.22
PTPA-219ENST00000435305 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
PTPA-219ENST00000435305 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
PTPA-219ENST00000435305 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
PTPA-219ENST00000435305 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
PTPA-219ENST00000435305 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
PTPA-219ENST00000435305 CC2D2BQ6DHV5 1058 aa16.39■□□□□ 0.21
PTPA-219ENST00000435305 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
PTPA-219ENST00000435305 RNF123Q5XPI4 1314 aa16.39■□□□□ 0.21
PTPA-219ENST00000435305 NTSR2O95665 410 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 APLP1P51693 650 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 PRELPP51888 382 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPA-219ENST00000435305 FSTL1Q12841 308 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 CRY2Q49AN0 593 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 LRP10Q7Z4F1 713 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
PTPA-219ENST00000435305 RIC1Q4ADV7 1423 aa16.37■□□□□ 0.21
PTPA-219ENST00000435305 SMC1BQ8NDV3 1235 aa16.37■□□□□ 0.21
PTPA-219ENST00000435305 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
PTPA-219ENST00000435305 C7orf43Q8WVR3 580 aa16.37■□□□□ 0.21
PTPA-219ENST00000435305 CRAMP1Q96RY5 1269 aa16.37■□□□□ 0.21
PTPA-219ENST00000435305 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
PTPA-219ENST00000435305 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
PTPA-219ENST00000435305 ELL2O00472 640 aaPredicted RBP16.35■□□□□ 0.21
PTPA-219ENST00000435305 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
PTPA-219ENST00000435305 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
PTPA-219ENST00000435305 SLC10A5Q5PT55 438 aa16.35■□□□□ 0.21
PTPA-219ENST00000435305 NLRP10Q86W26 655 aa16.35■□□□□ 0.21
PTPA-219ENST00000435305 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
PTPA-219ENST00000435305 JDP2Q8WYK2 163 aa16.35■□□□□ 0.21
PTPA-219ENST00000435305 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
PTPA-219ENST00000435305 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
PTPA-219ENST00000435305 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
PTPA-219ENST00000435305 SH3TC1Q8TE82 1336 aa16.34■□□□□ 0.21
PTPA-219ENST00000435305 IQCA1LA6NCM1 817 aa16.33■□□□□ 0.2
PTPA-219ENST00000435305 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
PTPA-219ENST00000435305 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.2
PTPA-219ENST00000435305 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.2
PTPA-219ENST00000435305 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
PTPA-219ENST00000435305 PSMD1Q99460 953 aa16.33■□□□□ 0.2
PTPA-219ENST00000435305 WDR90Q96KV7 1748 aa16.33■□□□□ 0.2
PTPA-219ENST00000435305 DDNO94850 711 aaPredicted RBP16.32■□□□□ 0.2
PTPA-219ENST00000435305 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
PTPA-219ENST00000435305 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
PTPA-219ENST00000435305 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
PTPA-219ENST00000435305 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
PTPA-219ENST00000435305 BBOX1O75936 387 aa16.31■□□□□ 0.2
PTPA-219ENST00000435305 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
PTPA-219ENST00000435305 STK31Q9BXU1 1019 aa16.31■□□□□ 0.2
PTPA-219ENST00000435305 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
PTPA-219ENST00000435305 EIF6P56537 245 aaKnown RBP16.3■□□□□ 0.2
PTPA-219ENST00000435305 SUPT20HQ8NEM7 779 aa16.3■□□□□ 0.2
PTPA-219ENST00000435305 SCN4AP35499 1836 aa16.3■□□□□ 0.2
PTPA-219ENST00000435305 LAMB2P55268 1798 aa16.3■□□□□ 0.2
PTPA-219ENST00000435305 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
PTPA-219ENST00000435305 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
PTPA-219ENST00000435305 LARGE2Q8N3Y3 721 aa16.29■□□□□ 0.2
PTPA-219ENST00000435305 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
PTPA-219ENST00000435305 ISCA1Q9BUE6 129 aa16.29■□□□□ 0.2
PTPA-219ENST00000435305 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
PTPA-219ENST00000435305 C3orf67Q6ZVT6 689 aa16.28■□□□□ 0.2
PTPA-219ENST00000435305 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
PTPA-219ENST00000435305 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
PTPA-219ENST00000435305 PHAXQ9H814 394 aaKnown RBP16.28■□□□□ 0.2
PTPA-219ENST00000435305 ABCC4O15439 1325 aa16.27■□□□□ 0.2
PTPA-219ENST00000435305 IL16Q14005 1332 aa16.27■□□□□ 0.2
PTPA-219ENST00000435305 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
PTPA-219ENST00000435305 SP8Q8IXZ3 490 aa16.27■□□□□ 0.2
PTPA-219ENST00000435305 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
PTPA-219ENST00000435305 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
PTPA-219ENST00000435305 ZNF428Q96B54 188 aa16.27■□□□□ 0.2
PTPA-219ENST00000435305 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
PTPA-219ENST00000435305 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
PTPA-219ENST00000435305 POTECB2RU33 542 aa16.26■□□□□ 0.19
PTPA-219ENST00000435305 FZD9O00144 591 aa16.26■□□□□ 0.19
PTPA-219ENST00000435305 GRAPQ13588 217 aa16.26■□□□□ 0.19
PTPA-219ENST00000435305 DPP8Q6V1X1 898 aaPredicted RBP16.26■□□□□ 0.19
PTPA-219ENST00000435305 MPNDQ8N594 471 aa16.26■□□□□ 0.19
PTPA-219ENST00000435305 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
PTPA-219ENST00000435305 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
PTPA-219ENST00000435305 MYD88Q99836 296 aa16.26■□□□□ 0.19
PTPA-219ENST00000435305 HACL1Q9UJ83 578 aa16.26■□□□□ 0.19
PTPA-219ENST00000435305 CACNA1FO60840 1977 aa16.26■□□□□ 0.19
PTPA-219ENST00000435305 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
PTPA-219ENST00000435305 PPIP5K2O43314 1243 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms