RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 METTL24Q5JXM2 366 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 BLOC1S2Q6QNY1 142 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 CARD10Q9BWT7 1032 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 STAP2Q9UGK3 403 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 RBM8AQ9Y5S9 174 aaKnown RBP14.58□□□□□ -0.08
CLDN4-203ENST00000435050 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 IFIT5Q13325 482 aaKnown RBP14.58□□□□□ -0.08
CLDN4-203ENST00000435050 CCDC158Q5M9N0 1113 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 SASH1O94885 1247 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 RAB3GAP1Q15042 981 aa14.58□□□□□ -0.08
CLDN4-203ENST00000435050 FIBPO43427 364 aa14.57□□□□□ -0.08
CLDN4-203ENST00000435050 NECAB1Q8N987 351 aa14.57□□□□□ -0.08
CLDN4-203ENST00000435050 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.57□□□□□ -0.08
CLDN4-203ENST00000435050 PDIA6Q15084 440 aa14.57□□□□□ -0.08
CLDN4-203ENST00000435050 CCDC129Q6ZRS4 1044 aa14.57□□□□□ -0.08
CLDN4-203ENST00000435050 NGLY1Q96IV0 654 aa14.57□□□□□ -0.08
CLDN4-203ENST00000435050 MEGF6O75095 1541 aa14.57□□□□□ -0.08
CLDN4-203ENST00000435050 NALCNQ8IZF0 1738 aa14.57□□□□□ -0.08
CLDN4-203ENST00000435050 ERVV-2B6SEH9 535 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 KDM4AO75164 1064 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 PSMA5P28066 241 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 DDB1Q16531 1140 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 LDHAL6AQ6ZMR3 332 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 PI4K2BQ8TCG2 481 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 NCAPD2Q15021 1401 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 KDM4FA0A1W2PPD8 638 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 PTH1RQ03431 593 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 HSP90AB3PQ58FF7 597 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 TNNI3KQ59H18 835 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 STK11IPQ8N1F8 1099 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 RNF214Q8ND24 703 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.56□□□□□ -0.08
CLDN4-203ENST00000435050 FPGT-TNNI3KV9GXZ4 949 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 TOPAZ1Q8N9V7 1692 aa14.56□□□□□ -0.08
CLDN4-203ENST00000435050 PTMAP06454 111 aaKnown RBP14.55□□□□□ -0.08
CLDN4-203ENST00000435050 FAM184AQ8NB25 1140 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 NBPF26B4DH59 902 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 AK2P54819 239 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 NBPF10Q6P3W6 841 aaKnown RBP14.55□□□□□ -0.08
CLDN4-203ENST00000435050 NBPF15Q8N660 670 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 HELBQ8NG08 1087 aaPredicted RBP14.55□□□□□ -0.08
CLDN4-203ENST00000435050 IL25Q9H293 177 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 H3BQV1 296 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 IFFO2Q5TF58 517 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.55□□□□□ -0.08
CLDN4-203ENST00000435050 SNX14Q9Y5W7 946 aa14.55□□□□□ -0.08
CLDN4-203ENST00000435050 MEX3CQ5U5Q3 659 aaKnown RBP14.54□□□□□ -0.08
CLDN4-203ENST00000435050 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
CLDN4-203ENST00000435050 PIGBQ92521 554 aa14.54□□□□□ -0.08
CLDN4-203ENST00000435050 C8orf37Q96NL8 207 aa14.54□□□□□ -0.08
CLDN4-203ENST00000435050 IDH1O75874 414 aaKnown RBP14.54□□□□□ -0.08
CLDN4-203ENST00000435050 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
CLDN4-203ENST00000435050 LIMCH1Q9UPQ0 1083 aa14.54□□□□□ -0.08
CLDN4-203ENST00000435050 LRRC24Q50LG9 513 aa14.54□□□□□ -0.08
CLDN4-203ENST00000435050 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
CLDN4-203ENST00000435050 MPHOSPH8Q99549 860 aa14.53□□□□□ -0.08
CLDN4-203ENST00000435050 TEX13AQ9BXU3 409 aaPredicted RBP14.53□□□□□ -0.08
CLDN4-203ENST00000435050 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
CLDN4-203ENST00000435050 ANAPC15P60006 121 aa14.53□□□□□ -0.08
CLDN4-203ENST00000435050 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
CLDN4-203ENST00000435050 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
CLDN4-203ENST00000435050 DZIP3Q86Y13 1208 aaKnown RBP14.53□□□□□ -0.08
CLDN4-203ENST00000435050 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
CLDN4-203ENST00000435050 PUS3Q9BZE2 481 aaKnown RBP14.53□□□□□ -0.08
CLDN4-203ENST00000435050 AOX1Q06278 1338 aa14.53□□□□□ -0.08
CLDN4-203ENST00000435050 PANK2Q9BZ23 570 aa14.52□□□□□ -0.08
CLDN4-203ENST00000435050 DBNLQ9UJU6 430 aaKnown RBP14.52□□□□□ -0.08
CLDN4-203ENST00000435050 RAD50Q92878 1312 aa14.52□□□□□ -0.08
CLDN4-203ENST00000435050 HAND2P61296 217 aa14.52□□□□□ -0.08
CLDN4-203ENST00000435050 KDM6AO15550 1401 aaPredicted RBP14.52□□□□□ -0.09
CLDN4-203ENST00000435050 UBAP1LF5GYI3 381 aa14.52□□□□□ -0.09
CLDN4-203ENST00000435050 SYNE4Q8N205 404 aa14.52□□□□□ -0.09
CLDN4-203ENST00000435050 CCDC171Q6TFL3 1326 aa14.52□□□□□ -0.09
CLDN4-203ENST00000435050 NFAT5O94916 1531 aa14.52□□□□□ -0.09
CLDN4-203ENST00000435050 HSPA4P34932 840 aa14.52□□□□□ -0.09
CLDN4-203ENST00000435050 PTPN12Q05209 780 aaKnown RBP14.52□□□□□ -0.09
CLDN4-203ENST00000435050 CREB3L3Q68CJ9 461 aa14.52□□□□□ -0.09
CLDN4-203ENST00000435050 A0A1B0GUL7 405 aa14.51□□□□□ -0.09
CLDN4-203ENST00000435050 IL15P40933 162 aaPredicted RBP14.51□□□□□ -0.09
CLDN4-203ENST00000435050 KCNQ4P56696 695 aa14.51□□□□□ -0.09
CLDN4-203ENST00000435050 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
CLDN4-203ENST00000435050 CCDC191Q8NCU4 936 aa14.51□□□□□ -0.09
CLDN4-203ENST00000435050 KAZALD1Q96I82 304 aa14.51□□□□□ -0.09
CLDN4-203ENST00000435050 WDR33Q9C0J8 1336 aaKnown RBP14.51□□□□□ -0.09
CLDN4-203ENST00000435050 GRPEL1Q9HAV7 217 aa14.51□□□□□ -0.09
CLDN4-203ENST00000435050 ZBTB1Q9Y2K1 713 aa14.51□□□□□ -0.09
CLDN4-203ENST00000435050 CHD2O14647 1828 aaKnown RBP14.51□□□□□ -0.09
CLDN4-203ENST00000435050 ANKRD18BA2A2Z9 1011 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 HCLS1P14317 486 aaPredicted RBP14.5□□□□□ -0.09
CLDN4-203ENST00000435050 MRE11P49959 708 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 CEBPZQ03701 1054 aaKnown RBP14.5□□□□□ -0.09
CLDN4-203ENST00000435050 LRRFIP1Q32MZ4 808 aaKnown RBP14.5□□□□□ -0.09
CLDN4-203ENST00000435050 SYAP1Q96A49 352 aaPredicted RBP14.5□□□□□ -0.09
CLDN4-203ENST00000435050 EYA2O00167 538 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 SLFNL1Q499Z3 407 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.5□□□□□ -0.09
CLDN4-203ENST00000435050 IRS4O14654 1257 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms