RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 TAOK3Q9H2K8 898 aa28.73■■■□□ 2.19
SEMA3B-205ENST00000434030 TCIRG1Q13488 830 aa28.72■■■□□ 2.19
SEMA3B-205ENST00000434030 CCDC27Q2M243 656 aa28.72■■■□□ 2.19
SEMA3B-205ENST00000434030 UTP14AQ9BVJ6 771 aaKnown RBP28.72■■■□□ 2.19
SEMA3B-205ENST00000434030 LAMB2P55268 1798 aa28.72■■■□□ 2.19
SEMA3B-205ENST00000434030 ELL2O00472 640 aaPredicted RBP28.71■■■□□ 2.19
SEMA3B-205ENST00000434030 HYPKQ9NX55 129 aa28.71■■■□□ 2.19
SEMA3B-205ENST00000434030 CCDC93Q567U6 631 aa28.7■■■□□ 2.18
SEMA3B-205ENST00000434030 ANKRD13DQ6ZTN6 518 aa28.7■■■□□ 2.18
SEMA3B-205ENST00000434030 WWC1Q8IX03 1113 aa28.7■■■□□ 2.18
SEMA3B-205ENST00000434030 GLTPD2A6NH11 291 aa28.69■■■□□ 2.18
SEMA3B-205ENST00000434030 SLC10A5Q5PT55 438 aa28.69■■■□□ 2.18
SEMA3B-205ENST00000434030 NLRP10Q86W26 655 aa28.69■■■□□ 2.18
SEMA3B-205ENST00000434030 C8orf58Q8NAV2 365 aa28.69■■■□□ 2.18
SEMA3B-205ENST00000434030 PLBD2Q8NHP8 589 aa28.69■■■□□ 2.18
SEMA3B-205ENST00000434030 RRAGCQ9HB90 399 aa28.69■■■□□ 2.18
SEMA3B-205ENST00000434030 TOMM70O94826 608 aa28.68■■■□□ 2.18
SEMA3B-205ENST00000434030 HOXA10P31260 410 aaPredicted RBP28.68■■■□□ 2.18
SEMA3B-205ENST00000434030 OLFM4Q6UX06 510 aa28.68■■■□□ 2.18
SEMA3B-205ENST00000434030 RPGRQ92834 1020 aaKnown RBP28.68■■■□□ 2.18
SEMA3B-205ENST00000434030 C3orf67Q6ZVT6 689 aa28.67■■■□□ 2.18
SEMA3B-205ENST00000434030 NLRP3Q96P20 1036 aa28.67■■■□□ 2.18
SEMA3B-205ENST00000434030 NCBP3Q53F19 620 aaKnown RBP28.66■■■□□ 2.18
SEMA3B-205ENST00000434030 RNF123Q5XPI4 1314 aa28.66■■■□□ 2.18
SEMA3B-205ENST00000434030 FKBP4Q02790 459 aaKnown RBP eCLIP28.64■■■□□ 2.18
SEMA3B-205ENST00000434030 RTKN2Q8IZC4 609 aa28.64■■■□□ 2.18
SEMA3B-205ENST00000434030 SYNE4Q8N205 404 aa28.64■■■□□ 2.18
SEMA3B-205ENST00000434030 TSR2Q969E8 191 aaKnown RBP28.64■■■□□ 2.18
SEMA3B-205ENST00000434030 RBM17Q96I25 401 aaKnown RBP28.64■■■□□ 2.18
SEMA3B-205ENST00000434030 CRAMP1Q96RY5 1269 aa28.64■■■□□ 2.18
SEMA3B-205ENST00000434030 TRMT112Q9UI30 125 aaKnown RBP28.64■■■□□ 2.18
SEMA3B-205ENST00000434030 TSPYL6Q8N831 410 aa28.63■■■□□ 2.17
SEMA3B-205ENST00000434030 PHAXQ9H814 394 aaKnown RBP28.63■■■□□ 2.17
SEMA3B-205ENST00000434030 TAF1P21675 1872 aa28.63■■■□□ 2.17
SEMA3B-205ENST00000434030 DDX60Q8IY21 1712 aaKnown RBP28.63■■■□□ 2.17
SEMA3B-205ENST00000434030 DPY19L2Q6NUT2 758 aa28.62■■■□□ 2.17
SEMA3B-205ENST00000434030 C16orf71Q8IYS4 520 aaPredicted RBP28.62■■■□□ 2.17
SEMA3B-205ENST00000434030 ISCA1Q9BUE6 129 aa28.62■■■□□ 2.17
SEMA3B-205ENST00000434030 WDR90Q96KV7 1748 aa28.61■■■□□ 2.17
SEMA3B-205ENST00000434030 HSPA6P17066 643 aa28.61■■■□□ 2.17
SEMA3B-205ENST00000434030 IL16Q14005 1332 aa28.61■■■□□ 2.17
SEMA3B-205ENST00000434030 SH3TC1Q8TE82 1336 aa28.61■■■□□ 2.17
SEMA3B-205ENST00000434030 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
SEMA3B-205ENST00000434030 ATP5J2-PTCD1G3V325 749 aa28.6■■■□□ 2.17
SEMA3B-205ENST00000434030 HCLS1P14317 486 aaPredicted RBP28.6■■■□□ 2.17
SEMA3B-205ENST00000434030 CCDC30Q5VVM6 783 aa28.6■■■□□ 2.17
SEMA3B-205ENST00000434030 RBM46Q8TBY0 533 aaKnown RBP28.6■■■□□ 2.17
SEMA3B-205ENST00000434030 ZNF428Q96B54 188 aa28.6■■■□□ 2.17
SEMA3B-205ENST00000434030 CHMP4AQ9BY43 222 aa28.6■■■□□ 2.17
SEMA3B-205ENST00000434030 CC2D2BQ6DHV5 1058 aa28.59■■■□□ 2.17
SEMA3B-205ENST00000434030 ZNF277Q9NRM2 450 aaPredicted RBP28.59■■■□□ 2.17
SEMA3B-205ENST00000434030 SALL2Q9Y467 1007 aaPredicted RBP28.59■■■□□ 2.17
SEMA3B-205ENST00000434030 VEGFAP15692 232 aaPredicted RBP28.58■■■□□ 2.17
SEMA3B-205ENST00000434030 RIC3Q7Z5B4 369 aa28.58■■■□□ 2.17
SEMA3B-205ENST00000434030 CACNA1FO60840 1977 aa28.57■■■□□ 2.16
SEMA3B-205ENST00000434030 GOLGA2Q08379 1002 aa28.57■■■□□ 2.16
SEMA3B-205ENST00000434030 FAM9BQ8IZU0 186 aa28.57■■■□□ 2.16
SEMA3B-205ENST00000434030 POTECB2RU33 542 aa28.56■■■□□ 2.16
SEMA3B-205ENST00000434030 TCERG1O14776 1098 aaKnown RBP28.56■■■□□ 2.16
SEMA3B-205ENST00000434030 PPEF1O14829 653 aaPredicted RBP28.56■■■□□ 2.16
SEMA3B-205ENST00000434030 TRIM28Q13263 835 aaKnown RBP28.56■■■□□ 2.16
SEMA3B-205ENST00000434030 PSMD1Q99460 953 aa28.56■■■□□ 2.16
SEMA3B-205ENST00000434030 ABCC4O15439 1325 aa28.55■■■□□ 2.16
SEMA3B-205ENST00000434030 IARSP41252 1262 aaKnown RBP28.54■■■□□ 2.16
SEMA3B-205ENST00000434030 TWISTNBQ3B726 338 aaPredicted RBP28.54■■■□□ 2.16
SEMA3B-205ENST00000434030 GRIPAP1Q4V328 841 aa28.54■■■□□ 2.16
SEMA3B-205ENST00000434030 SLC51AQ86UW1 340 aa28.54■■■□□ 2.16
SEMA3B-205ENST00000434030 WDR63Q8IWG1 891 aa28.54■■■□□ 2.16
SEMA3B-205ENST00000434030 FAM89AQ96GI7 184 aa28.54■■■□□ 2.16
SEMA3B-205ENST00000434030 DDNO94850 711 aaPredicted RBP28.53■■■□□ 2.16
SEMA3B-205ENST00000434030 SCN4AP35499 1836 aa28.51■■■□□ 2.15
SEMA3B-205ENST00000434030 FSTL1Q12841 308 aa28.51■■■□□ 2.15
SEMA3B-205ENST00000434030 MYD88Q99836 296 aa28.51■■■□□ 2.15
SEMA3B-205ENST00000434030 ATP6V0A2Q9Y487 856 aa28.51■■■□□ 2.15
SEMA3B-205ENST00000434030 FANCIQ9NVI1 1328 aa28.5■■■□□ 2.15
SEMA3B-205ENST00000434030 BBOX1O75936 387 aa28.5■■■□□ 2.15
SEMA3B-205ENST00000434030 DDX58O95786 925 aaKnown RBP28.5■■■□□ 2.15
SEMA3B-205ENST00000434030 RTL5Q5HYW3 569 aaPredicted RBP28.5■■■□□ 2.15
SEMA3B-205ENST00000434030 DDX46Q7L014 1031 aaKnown RBP28.5■■■□□ 2.15
SEMA3B-205ENST00000434030 STK31Q9BXU1 1019 aa28.5■■■□□ 2.15
SEMA3B-205ENST00000434030 CEP350Q5VT06 3117 aa28.49■■■□□ 2.15
SEMA3B-205ENST00000434030 FZD9O00144 591 aa28.48■■■□□ 2.15
SEMA3B-205ENST00000434030 METTL22Q9BUU2 404 aaPredicted RBP28.48■■■□□ 2.15
SEMA3B-205ENST00000434030 TMX4Q9H1E5 349 aaPredicted RBP28.48■■■□□ 2.15
SEMA3B-205ENST00000434030 ZNF541Q9H0D2 1346 aa28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 GRAPQ13588 217 aa28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 SF3B3Q15393 1217 aaKnown RBP28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 SP8Q8IXZ3 490 aa28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 ZBTB38Q8NAP3 1195 aaPredicted RBP28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 SMC1BQ8NDV3 1235 aa28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 GRAPLQ8TC17 118 aaPredicted RBP28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 COL4A5P29400 1685 aa28.47■■■□□ 2.15
SEMA3B-205ENST00000434030 IRS4O14654 1257 aaPredicted RBP28.46■■■□□ 2.15
SEMA3B-205ENST00000434030 APLP1P51693 650 aa28.46■■■□□ 2.15
SEMA3B-205ENST00000434030 KSR2Q6VAB6 950 aa28.46■■■□□ 2.15
SEMA3B-205ENST00000434030 CCDC191Q8NCU4 936 aa28.46■■■□□ 2.15
SEMA3B-205ENST00000434030 JDP2Q8WYK2 163 aa28.46■■■□□ 2.15
SEMA3B-205ENST00000434030 MAP3K2Q9Y2U5 619 aa28.46■■■□□ 2.15
SEMA3B-205ENST00000434030 SLC4A2P04920 1241 aa28.45■■■□□ 2.14
SEMA3B-205ENST00000434030 SPINK5Q9NQ38 1064 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms