RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DLEC1Q9Y238 1755 aa19.78■□□□□ 0.76
TREX1-201ENST00000433541 COL11A2P13942 1736 aaPredicted RBP19.77■□□□□ 0.76
TREX1-201ENST00000433541 ERFEQ4G0M1 354 aa19.77■□□□□ 0.76
TREX1-201ENST00000433541 SSH1Q8WYL5 1049 aa19.77■□□□□ 0.76
TREX1-201ENST00000433541 ZNF622Q969S3 477 aaKnown RBP eCLIP19.77■□□□□ 0.76
TREX1-201ENST00000433541 METTL22Q9BUU2 404 aaPredicted RBP19.77■□□□□ 0.76
TREX1-201ENST00000433541 ADCY9O60503 1353 aa19.77■□□□□ 0.76
TREX1-201ENST00000433541 IBTKQ9P2D0 1353 aaPredicted RBP19.77■□□□□ 0.76
TREX1-201ENST00000433541 BRCA1P38398 1863 aaKnown RBP19.77■□□□□ 0.76
TREX1-201ENST00000433541 NTSR2O95665 410 aa19.76■□□□□ 0.75
TREX1-201ENST00000433541 ALDH1L2Q3SY69 923 aa19.76■□□□□ 0.75
TREX1-201ENST00000433541 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
TREX1-201ENST00000433541 PIM2Q9P1W9 311 aa19.76■□□□□ 0.75
TREX1-201ENST00000433541 BCS1LQ9Y276 419 aa19.76■□□□□ 0.75
TREX1-201ENST00000433541 SLC4A10Q6U841 1118 aa19.75■□□□□ 0.75
TREX1-201ENST00000433541 DNAAF4Q8WXU2 420 aa19.75■□□□□ 0.75
TREX1-201ENST00000433541 SH3TC1Q8TE82 1336 aa19.75■□□□□ 0.75
TREX1-201ENST00000433541 TNRC6CQ9HCJ0 1690 aaKnown RBP19.75■□□□□ 0.75
TREX1-201ENST00000433541 ABCC12Q96J65 1359 aa19.74■□□□□ 0.75
TREX1-201ENST00000433541 MRPL50Q8N5N7 158 aaKnown RBP19.74■□□□□ 0.75
TREX1-201ENST00000433541 ISCA1Q9BUE6 129 aa19.74■□□□□ 0.75
TREX1-201ENST00000433541 CWC25Q9NXE8 425 aaPredicted RBP19.74■□□□□ 0.75
TREX1-201ENST00000433541 PDZRN3Q9UPQ7 1066 aa19.74■□□□□ 0.75
TREX1-201ENST00000433541 RNF123Q5XPI4 1314 aa19.74■□□□□ 0.75
TREX1-201ENST00000433541 F6X3S4 739 aa19.73■□□□□ 0.75
TREX1-201ENST00000433541 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
TREX1-201ENST00000433541 LAMB2P55268 1798 aa19.72■□□□□ 0.75
TREX1-201ENST00000433541 DALRD3Q5D0E6 543 aaKnown RBP19.72■□□□□ 0.75
TREX1-201ENST00000433541 RPGRQ92834 1020 aaKnown RBP19.72■□□□□ 0.75
TREX1-201ENST00000433541 FAM89AQ96GI7 184 aa19.72■□□□□ 0.75
TREX1-201ENST00000433541 PTPRCP08575 1304 aa19.72■□□□□ 0.75
TREX1-201ENST00000433541 ARFGEF1Q9Y6D6 1849 aa19.72■□□□□ 0.75
TREX1-201ENST00000433541 HCLS1P14317 486 aaPredicted RBP19.71■□□□□ 0.75
TREX1-201ENST00000433541 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
TREX1-201ENST00000433541 NLRP3Q96P20 1036 aa19.71■□□□□ 0.75
TREX1-201ENST00000433541 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
TREX1-201ENST00000433541 RARSP54136 660 aaKnown RBP19.7■□□□□ 0.74
TREX1-201ENST00000433541 TRIM28Q13263 835 aaKnown RBP19.7■□□□□ 0.74
TREX1-201ENST00000433541 TTLL6Q8N841 843 aa19.7■□□□□ 0.74
TREX1-201ENST00000433541 MASTLQ96GX5 879 aa19.7■□□□□ 0.74
TREX1-201ENST00000433541 KIF16BQ96L93 1317 aa19.7■□□□□ 0.74
TREX1-201ENST00000433541 MYH3P11055 1940 aa19.69■□□□□ 0.74
TREX1-201ENST00000433541 NEURL1BA8MQ27 555 aa19.69■□□□□ 0.74
TREX1-201ENST00000433541 GRIN3BO60391 1043 aa19.69■□□□□ 0.74
TREX1-201ENST00000433541 HSP90B1P14625 803 aaKnown RBP19.69■□□□□ 0.74
TREX1-201ENST00000433541 NPR1P16066 1061 aa19.69■□□□□ 0.74
TREX1-201ENST00000433541 YBX3P16989 372 aaKnown RBP eCLIP19.69■□□□□ 0.74
TREX1-201ENST00000433541 KCNA3P22001 575 aa19.69■□□□□ 0.74
TREX1-201ENST00000433541 SYNE4Q8N205 404 aa19.69■□□□□ 0.74
TREX1-201ENST00000433541 ZBTB38Q8NAP3 1195 aaPredicted RBP19.69■□□□□ 0.74
TREX1-201ENST00000433541 LINS1Q8NG48 757 aa19.69■□□□□ 0.74
TREX1-201ENST00000433541 FRAT1Q92837 279 aaPredicted RBP19.69■□□□□ 0.74
TREX1-201ENST00000433541 ZNF219Q9P2Y4 722 aaPredicted RBP19.69■□□□□ 0.74
TREX1-201ENST00000433541 IRS4O14654 1257 aaPredicted RBP19.68■□□□□ 0.74
TREX1-201ENST00000433541 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
TREX1-201ENST00000433541 SRGNP10124 158 aa19.68■□□□□ 0.74
TREX1-201ENST00000433541 JARID2Q92833 1246 aaPredicted RBP19.68■□□□□ 0.74
TREX1-201ENST00000433541 CNKSR1Q969H4 720 aa19.68■□□□□ 0.74
TREX1-201ENST00000433541 CHD4Q14839 1912 aa19.68■□□□□ 0.74
TREX1-201ENST00000433541 RIC1Q4ADV7 1423 aa19.68■□□□□ 0.74
TREX1-201ENST00000433541 STYK1Q6J9G0 422 aa19.67■□□□□ 0.74
TREX1-201ENST00000433541 NOB1Q9ULX3 412 aaKnown RBP19.67■□□□□ 0.74
TREX1-201ENST00000433541 GOLGB1Q14789 3259 aaKnown RBP19.67■□□□□ 0.74
TREX1-201ENST00000433541 SLX4Q8IY92 1834 aa19.67■□□□□ 0.74
TREX1-201ENST00000433541 PCCAP05165 728 aaPredicted RBP19.66■□□□□ 0.74
TREX1-201ENST00000433541 UBE3BQ7Z3V4 1068 aa19.66■□□□□ 0.74
TREX1-201ENST00000433541 RBM17Q96I25 401 aaKnown RBP19.66■□□□□ 0.74
TREX1-201ENST00000433541 SRCIN1Q9C0H9 1055 aa19.66■□□□□ 0.74
TREX1-201ENST00000433541 BCAR3O75815 825 aa19.65■□□□□ 0.74
TREX1-201ENST00000433541 GCKRQ14397 625 aa19.65■□□□□ 0.74
TREX1-201ENST00000433541 ARHGAP27Q6ZUM4 889 aa19.65■□□□□ 0.74
TREX1-201ENST00000433541 API5Q9BZZ5 524 aaKnown RBP19.65■□□□□ 0.74
TREX1-201ENST00000433541 C9orf78Q9NZ63 289 aaPredicted RBP19.65■□□□□ 0.74
TREX1-201ENST00000433541 IPO8O15397 1037 aaKnown RBP19.64■□□□□ 0.73
TREX1-201ENST00000433541 ALDH1B1P30837 517 aa19.64■□□□□ 0.73
TREX1-201ENST00000433541 SLC10A5Q5PT55 438 aa19.64■□□□□ 0.73
TREX1-201ENST00000433541 BEND3Q5T5X7 828 aa19.64■□□□□ 0.73
TREX1-201ENST00000433541 PRPF40BQ6NWY9 871 aaKnown RBP19.64■□□□□ 0.73
TREX1-201ENST00000433541 C3orf67Q6ZVT6 689 aa19.64■□□□□ 0.73
TREX1-201ENST00000433541 TAF1P21675 1872 aa19.64■□□□□ 0.73
TREX1-201ENST00000433541 CRY2Q49AN0 593 aa19.63■□□□□ 0.73
TREX1-201ENST00000433541 DDX46Q7L014 1031 aaKnown RBP19.63■□□□□ 0.73
TREX1-201ENST00000433541 KLRG2A4D1S0 409 aaPredicted RBP19.62■□□□□ 0.73
TREX1-201ENST00000433541 C21orf2O43822 256 aa19.62■□□□□ 0.73
TREX1-201ENST00000433541 PDE8AO60658 829 aa19.62■□□□□ 0.73
TREX1-201ENST00000433541 ALDH1L1O75891 902 aa19.62■□□□□ 0.73
TREX1-201ENST00000433541 TMX4Q9H1E5 349 aaPredicted RBP19.62■□□□□ 0.73
TREX1-201ENST00000433541 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
TREX1-201ENST00000433541 CCDC85AQ96PX6 553 aaPredicted RBP19.61■□□□□ 0.73
TREX1-201ENST00000433541 SPEF2Q9C093 1822 aa19.6■□□□□ 0.73
TREX1-201ENST00000433541 BRPF1P55201 1214 aaPredicted RBP19.6■□□□□ 0.73
TREX1-201ENST00000433541 CCDC152Q4G0S7 254 aa19.6■□□□□ 0.73
TREX1-201ENST00000433541 CCDC88AQ3V6T2 1871 aa19.6■□□□□ 0.73
TREX1-201ENST00000433541 GRM8O00222 908 aa19.59■□□□□ 0.73
TREX1-201ENST00000433541 PPEF1O14829 653 aaPredicted RBP19.59■□□□□ 0.73
TREX1-201ENST00000433541 ZKSCAN2Q63HK3 967 aa19.59■□□□□ 0.73
TREX1-201ENST00000433541 CLUAP1Q96AJ1 413 aa19.59■□□□□ 0.73
TREX1-201ENST00000433541 CRAMP1Q96RY5 1269 aa19.59■□□□□ 0.73
TREX1-201ENST00000433541 ABCC4O15439 1325 aa19.58■□□□□ 0.73
TREX1-201ENST00000433541 H7C1W4 665 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms