RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
CCDC144CP-202ENST00000433419 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
CCDC144CP-202ENST00000433419 USP21Q9UK80 565 aa12.64□□□□□ -0.39
CCDC144CP-202ENST00000433419 RHPN1Q8TCX5 695 aa12.64□□□□□ -0.39
CCDC144CP-202ENST00000433419 PARP10Q53GL7 1025 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 TMEM67Q5HYA8 995 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 STX8Q9UNK0 236 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 PLEKHH1Q9ULM0 1364 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 ASXL1Q8IXJ9 1541 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 ZFYVE9O95405 1425 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 TTLL5Q6EMB2 1281 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 HMG20BQ9P0W2 317 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 B4DLN1 442 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 MRPL12P52815 198 aaKnown RBP12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 SKAP1Q86WV1 359 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 KIF21AQ7Z4S6 1674 aa12.63□□□□□ -0.39
CCDC144CP-202ENST00000433419 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 TMTC2Q8N394 836 aa12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
CCDC144CP-202ENST00000433419 ESR2Q92731 530 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 KRT23Q9C075 422 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 BRPF3Q9ULD4 1205 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 GNAQP50148 359 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 LIMCH1Q9UPQ0 1083 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 TMEM2Q9UHN6 1383 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 PTPRKQ15262 1439 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 MCM4P33991 863 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 TNNI2P48788 182 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 FAM98CQ17RN3 349 aaKnown RBP12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 POLR3AO14802 1390 aaPredicted RBP12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 TSPY3P0CV98 308 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 TSPY8P0CW00 308 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
CCDC144CP-202ENST00000433419 TSG101Q99816 390 aa12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 VEZTQ9HBM0 779 aa12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 TCOF1Q13428 1488 aaKnown RBP12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 GRM1Q13255 1194 aa12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 ERCC4Q92889 916 aaPredicted RBP12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 IQSEC3Q9UPP2 1182 aaPredicted RBP12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 FGFR1OPO95684 399 aaKnown RBP12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 ATP7AQ04656 1500 aa12.6□□□□□ -0.39
CCDC144CP-202ENST00000433419 NEBLO76041 1014 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 SEPT11Q9NVA2 429 aaKnown RBP12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 MCM5P33992 734 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 ERLIN2O94905 339 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 EIF2AK4Q9P2K8 1649 aaKnown RBP12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 STXBP4Q6ZWJ1 553 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 A0A1W2PP64 1363 aa12.59□□□□□ -0.39
CCDC144CP-202ENST00000433419 CETN2P41208 172 aa12.58□□□□□ -0.39
CCDC144CP-202ENST00000433419 ZNF771Q7L3S4 317 aaPredicted RBP12.58□□□□□ -0.39
CCDC144CP-202ENST00000433419 NEK1Q96PY6 1258 aa12.58□□□□□ -0.39
CCDC144CP-202ENST00000433419 SLC4A4Q9Y6R1 1079 aa12.58□□□□□ -0.39
CCDC144CP-202ENST00000433419 CCDC150Q8NCX0 1101 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 CALML4Q96GE6 196 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 MEIS3Q99687 375 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 GNAT2P19087 354 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 HAND2P61296 217 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 ATP8B2P98198 1209 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 WTAPQ15007 396 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 SLC9C2Q5TAH2 1124 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 SPC24Q8NBT2 197 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 PYM1Q9BRP8 204 aaKnown RBP12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 AMPD3Q01432 767 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 C8orf58Q8NAV2 365 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 PIK3C2GO75747 1445 aa12.58□□□□□ -0.4
CCDC144CP-202ENST00000433419 METAP2P50579 478 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC144CP-202ENST00000433419 TEX35Q5T0J7 233 aa12.57□□□□□ -0.4
CCDC144CP-202ENST00000433419 ZNF790Q6PG37 636 aa12.57□□□□□ -0.4
CCDC144CP-202ENST00000433419 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
CCDC144CP-202ENST00000433419 SAMM50Q9Y512 469 aa12.57□□□□□ -0.4
CCDC144CP-202ENST00000433419 APBA3O96018 575 aa12.57□□□□□ -0.4
CCDC144CP-202ENST00000433419 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms