RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 UBR3Q6ZT12 1888 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 TEFQ10587 303 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 NOLC1Q14978 699 aaKnown RBP eCLIP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 DNTTIP2Q5QJE6 756 aaKnown RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 TTC5Q8N0Z6 440 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 SSH1Q8WYL5 1049 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 GCC1Q96CN9 775 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 BCL2L12Q9HB09 334 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 ZDHHC9Q9Y397 364 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 RTCBQ9Y3I0 505 aaKnown RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 CDC45O75419 566 aa9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 PTMAP06454 111 aaKnown RBP9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 MTHFSDQ2M296 383 aaKnown RBP9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 ANKRD7Q92527 254 aa9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 TSC1Q92574 1164 aa9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 NAP1L2Q9ULW6 460 aaPredicted RBP9.31□□□□□ -0.92
CNKSR3-202ENST00000433165 GNPATO15228 680 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 UVSSAQ2YD98 709 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 PDCL2Q8N4E4 241 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 NFATC2IPQ8NCF5 419 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 IPO4Q8TEX9 1081 aaKnown RBP9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 TSPY26PQ9H489 355 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 PRKAR2BP31323 418 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 EXOSC9Q06265 439 aaKnown RBP9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 LINC00116Q8NCU8 138 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 FEZ1Q99689 392 aa9.3□□□□□ -0.92
CNKSR3-202ENST00000433165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
CNKSR3-202ENST00000433165 RPS6KA4O75676 772 aa9.29□□□□□ -0.92
CNKSR3-202ENST00000433165 FAM184AQ8NB25 1140 aa9.29□□□□□ -0.92
CNKSR3-202ENST00000433165 RNF214Q8ND24 703 aa9.29□□□□□ -0.92
CNKSR3-202ENST00000433165 IL16Q14005 1332 aa9.29□□□□□ -0.92
CNKSR3-202ENST00000433165 TJP1Q07157 1748 aa9.29□□□□□ -0.92
CNKSR3-202ENST00000433165 UBR2Q8IWV8 1755 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 IPO8O15397 1037 aaKnown RBP9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 CTIFO43310 598 aaKnown RBP9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 NLGN1Q8N2Q7 840 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 TSR2Q969E8 191 aaKnown RBP9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 CD2APQ9Y5K6 639 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 A0A087WZG4 1122 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 KCNQ4P56696 695 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 ITPK1Q13572 414 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 SYT17Q9BSW7 474 aa9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 FHDC1Q9C0D6 1143 aaPredicted RBP9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 SIPA1L3O60292 1781 aaPredicted RBP9.28□□□□□ -0.92
CNKSR3-202ENST00000433165 STARD3NLO95772 234 aa9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 PDIA4P13667 645 aaKnown RBP9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 RFC4P35249 363 aa9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 LMOD3Q0VAK6 560 aa9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 ZGPATQ8N5A5 531 aaKnown RBP9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 SYAP1Q96A49 352 aaPredicted RBP9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 USP26Q9BXU7 913 aa9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 PDGFDQ9GZP0 370 aaPredicted RBP9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 DIAPH3Q9NSV4 1193 aa9.27□□□□□ -0.92
CNKSR3-202ENST00000433165 CEMIPQ8WUJ3 1361 aa9.27□□□□□ -0.93
CNKSR3-202ENST00000433165 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
CNKSR3-202ENST00000433165 PHF14O94880 888 aa9.27□□□□□ -0.93
CNKSR3-202ENST00000433165 GSPT1P15170 499 aaKnown RBP9.27□□□□□ -0.93
CNKSR3-202ENST00000433165 ALDH1L2Q3SY69 923 aa9.27□□□□□ -0.93
CNKSR3-202ENST00000433165 KCPQ6ZWJ8 1503 aa9.27□□□□□ -0.93
CNKSR3-202ENST00000433165 ST18O60284 1047 aa9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 CHMP4BQ9H444 224 aaKnown RBP9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 LGR6Q9HBX8 967 aa9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 OGFRQ9NZT2 677 aa9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 U2AF2P26368 475 aaKnown RBP eCLIP9.26□□□□□ -0.932e-7■■■□□ 15.1
CNKSR3-202ENST00000433165 SYCP1Q15431 976 aa9.26□□□□□ -0.93
CNKSR3-202ENST00000433165 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 ZBTB7BO15156 539 aaPredicted RBP9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 GRIN3BO60391 1043 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 CRKLP46109 303 aaKnown RBP9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 SLC20A2Q08357 652 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 BTBD11A6QL63 1104 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 BRD1O95696 1058 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 ZNF790Q6PG37 636 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 KLHL34Q8N239 644 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 ZNF830Q96NB3 372 aaPredicted RBP9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 TTC12Q9H892 705 aaPredicted RBP9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 CGNQ9P2M7 1197 aaKnown RBP9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
CNKSR3-202ENST00000433165 HEG1Q9ULI3 1381 aa9.24□□□□□ -0.93
CNKSR3-202ENST00000433165 C4AP0C0L4 1744 aa9.24□□□□□ -0.93
CNKSR3-202ENST00000433165 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
CNKSR3-202ENST00000433165 ZPR1O75312 459 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms