RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 ZNF428Q96B54 188 aa18.79■□□□□ 0.6
SEC13-212ENST00000432213 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
SEC13-212ENST00000432213 KIF6Q6ZMV9 814 aa18.78■□□□□ 0.6
SEC13-212ENST00000432213 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.6
SEC13-212ENST00000432213 TCERG1O14776 1098 aaKnown RBP18.77■□□□□ 0.6
SEC13-212ENST00000432213 GTF2E1P29083 439 aaPredicted RBP18.77■□□□□ 0.6
SEC13-212ENST00000432213 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
SEC13-212ENST00000432213 RTKN2Q8IZC4 609 aa18.77■□□□□ 0.6
SEC13-212ENST00000432213 NECTIN2Q92692 538 aa18.77■□□□□ 0.6
SEC13-212ENST00000432213 CREBZFQ9NS37 354 aa18.77■□□□□ 0.6
SEC13-212ENST00000432213 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.6
SEC13-212ENST00000432213 CAPN15O75808 1086 aa18.76■□□□□ 0.59
SEC13-212ENST00000432213 EIF2S2P20042 333 aaKnown RBP18.76■□□□□ 0.59
SEC13-212ENST00000432213 HOXA10P31260 410 aaPredicted RBP18.76■□□□□ 0.59
SEC13-212ENST00000432213 RIPK4P57078 832 aa18.76■□□□□ 0.59
SEC13-212ENST00000432213 FMR1Q06787 632 aaKnown RBP eCLIP18.76■□□□□ 0.59
SEC13-212ENST00000432213 EAPPQ56P03 285 aaPredicted RBP18.76■□□□□ 0.59
SEC13-212ENST00000432213 GIGYF2Q6Y7W6 1299 aaKnown RBP18.76■□□□□ 0.59
SEC13-212ENST00000432213 LDHDQ86WU2 507 aa18.76■□□□□ 0.59
SEC13-212ENST00000432213 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
SEC13-212ENST00000432213 LRRC37AA6NMS7 1700 aa18.75■□□□□ 0.59
SEC13-212ENST00000432213 ALDH1B1P30837 517 aa18.75■□□□□ 0.59
SEC13-212ENST00000432213 EPHX2P34913 555 aa18.75■□□□□ 0.59
SEC13-212ENST00000432213 TMPOP42166 694 aaKnown RBP18.75■□□□□ 0.59
SEC13-212ENST00000432213 MAP1SQ66K74 1059 aaPredicted RBP18.75■□□□□ 0.59
SEC13-212ENST00000432213 PSMD1Q99460 953 aa18.75■□□□□ 0.59
SEC13-212ENST00000432213 NYXQ9GZU5 481 aa18.75■□□□□ 0.59
SEC13-212ENST00000432213 CNTNAP1P78357 1384 aa18.75■□□□□ 0.59
SEC13-212ENST00000432213 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
SEC13-212ENST00000432213 IQCA1LA6NCM1 817 aa18.74■□□□□ 0.59
SEC13-212ENST00000432213 NEFMP07197 916 aa18.74■□□□□ 0.59
SEC13-212ENST00000432213 HACL1Q9UJ83 578 aa18.74■□□□□ 0.59
SEC13-212ENST00000432213 PPEF1O14829 653 aaPredicted RBP18.73■□□□□ 0.59
SEC13-212ENST00000432213 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
SEC13-212ENST00000432213 ABCC4O15439 1325 aa18.73■□□□□ 0.59
SEC13-212ENST00000432213 ERBB4Q15303 1308 aa18.73■□□□□ 0.59
SEC13-212ENST00000432213 THSD7BQ9C0I4 1608 aa18.72■□□□□ 0.59
SEC13-212ENST00000432213 SCNN1DP51172 638 aa18.72■□□□□ 0.59
SEC13-212ENST00000432213 TNS4Q8IZW8 715 aa18.72■□□□□ 0.59
SEC13-212ENST00000432213 GPC2Q8N158 579 aa18.71■□□□□ 0.59
SEC13-212ENST00000432213 XAGE3Q8WTP9 111 aa18.71■□□□□ 0.59
SEC13-212ENST00000432213 CRAMP1Q96RY5 1269 aa18.71■□□□□ 0.59
SEC13-212ENST00000432213 TRIM35Q9UPQ4 493 aa18.71■□□□□ 0.59
SEC13-212ENST00000432213 GJA3Q9Y6H8 435 aa18.71■□□□□ 0.59
SEC13-212ENST00000432213 FOXN1O15353 648 aa18.7■□□□□ 0.58
SEC13-212ENST00000432213 EPS15P42566 896 aa18.7■□□□□ 0.58
SEC13-212ENST00000432213 VEGFBP49765 207 aa18.7■□□□□ 0.58
SEC13-212ENST00000432213 NEUROD2Q15784 382 aa18.7■□□□□ 0.58
SEC13-212ENST00000432213 COPS6Q7L5N1 327 aa18.7■□□□□ 0.58
SEC13-212ENST00000432213 HCLS1P14317 486 aaPredicted RBP18.69■□□□□ 0.58
SEC13-212ENST00000432213 AIMP1Q12904 312 aaKnown RBP18.69■□□□□ 0.58
SEC13-212ENST00000432213 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
SEC13-212ENST00000432213 AOC3Q16853 763 aa18.69■□□□□ 0.58
SEC13-212ENST00000432213 CLEC11AQ9Y240 323 aa18.69■□□□□ 0.58
SEC13-212ENST00000432213 RALBP1Q15311 655 aa18.68■□□□□ 0.58
SEC13-212ENST00000432213 SLC10A5Q5PT55 438 aa18.68■□□□□ 0.58
SEC13-212ENST00000432213 NLRP10Q86W26 655 aa18.68■□□□□ 0.58
SEC13-212ENST00000432213 LARGE2Q8N3Y3 721 aa18.68■□□□□ 0.58
SEC13-212ENST00000432213 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
SEC13-212ENST00000432213 UTP14AQ9BVJ6 771 aaKnown RBP18.68■□□□□ 0.58
SEC13-212ENST00000432213 TMEM88BA6NKF7 163 aa18.67■□□□□ 0.58
SEC13-212ENST00000432213 CNTROBQ8N137 903 aa18.67■□□□□ 0.58
SEC13-212ENST00000432213 CHPF2Q9P2E5 772 aa18.67■□□□□ 0.58
SEC13-212ENST00000432213 CHL1O00533 1208 aa18.66■□□□□ 0.58
SEC13-212ENST00000432213 PARP10Q53GL7 1025 aa18.66■□□□□ 0.58
SEC13-212ENST00000432213 CC2D2BQ6DHV5 1058 aa18.66■□□□□ 0.58
SEC13-212ENST00000432213 PPP1R42Q7Z4L9 355 aa18.66■□□□□ 0.58
SEC13-212ENST00000432213 JDP2Q8WYK2 163 aa18.66■□□□□ 0.58
SEC13-212ENST00000432213 ATP6V0A2Q9Y487 856 aa18.66■□□□□ 0.58
SEC13-212ENST00000432213 MYBBP1AQ9BQG0 1328 aaKnown RBP18.66■□□□□ 0.58
SEC13-212ENST00000432213 SCN9AQ15858 1988 aa18.65■□□□□ 0.58
SEC13-212ENST00000432213 TRAF5O00463 557 aa18.65■□□□□ 0.58
SEC13-212ENST00000432213 PPIP5K2O43314 1243 aa18.65■□□□□ 0.58
SEC13-212ENST00000432213 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
SEC13-212ENST00000432213 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
SEC13-212ENST00000432213 SHTN1A0MZ66 631 aa18.64■□□□□ 0.57
SEC13-212ENST00000432213 EIF6P56537 245 aaKnown RBP18.64■□□□□ 0.57
SEC13-212ENST00000432213 NLRP3Q96P20 1036 aa18.64■□□□□ 0.57
SEC13-212ENST00000432213 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
SEC13-212ENST00000432213 CXCL9Q07325 125 aa18.63■□□□□ 0.57
SEC13-212ENST00000432213 TCIRG1Q13488 830 aa18.63■□□□□ 0.57
SEC13-212ENST00000432213 PNMA8AQ86V59 439 aaPredicted RBP18.63■□□□□ 0.57
SEC13-212ENST00000432213 DDX21Q9NR30 783 aaKnown RBP eCLIP18.63■□□□□ 0.573e-7■■■□□ 17.1
SEC13-212ENST00000432213 BABAM1Q9NWV8 329 aa18.63■□□□□ 0.57
SEC13-212ENST00000432213 SPEF2Q9C093 1822 aa18.63■□□□□ 0.57
SEC13-212ENST00000432213 POLR2AP24928 1970 aaKnown RBP18.62■□□□□ 0.57
SEC13-212ENST00000432213 RASSF10A6NK89 507 aa18.62■□□□□ 0.57
SEC13-212ENST00000432213 NIM1KQ8IY84 436 aa18.62■□□□□ 0.57
SEC13-212ENST00000432213 RTFDC1Q9BY42 306 aaPredicted RBP18.62■□□□□ 0.57
SEC13-212ENST00000432213 YDJCA8MPS7 323 aa18.61■□□□□ 0.57
SEC13-212ENST00000432213 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
SEC13-212ENST00000432213 CST9Q5W186 159 aa18.61■□□□□ 0.57
SEC13-212ENST00000432213 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
SEC13-212ENST00000432213 TRMT112Q9UI30 125 aaKnown RBP18.61■□□□□ 0.57
SEC13-212ENST00000432213 ATP5J2-PTCD1G3V325 749 aa18.6■□□□□ 0.57
SEC13-212ENST00000432213 WBP1LQ9NX94 342 aa18.6■□□□□ 0.57
SEC13-212ENST00000432213 GPRC5DQ9NZD1 345 aa18.6■□□□□ 0.57
SEC13-212ENST00000432213 SH3TC1Q8TE82 1336 aa18.59■□□□□ 0.57
SEC13-212ENST00000432213 LMOD1P29536 600 aaPredicted RBP18.59■□□□□ 0.57
SEC13-212ENST00000432213 GMPSP49915 693 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms