RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 LARP1BQ659C4 914 aaKnown RBP13.62□□□□□ -0.23
CLDN4-202ENST00000431918 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
CLDN4-202ENST00000431918 CNNM1Q9NRU3 951 aa13.62□□□□□ -0.23
CLDN4-202ENST00000431918 KDM4AO75164 1064 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 MBD3O95983 291 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 TIMM10P62072 90 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 KLHL40Q2TBA0 621 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 TTLL7Q6ZT98 887 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 DDX11Q96FC9 970 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 SNX14Q9Y5W7 946 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
CLDN4-202ENST00000431918 TTC39AQ5SRH9 613 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 ZNF594Q96JF6 807 aaPredicted RBP13.61□□□□□ -0.23
CLDN4-202ENST00000431918 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 ADCY9O60503 1353 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
CLDN4-202ENST00000431918 POLA2Q14181 598 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 DBNDD2Q9BQY9 259 aa13.61□□□□□ -0.23
CLDN4-202ENST00000431918 PHF14O94880 888 aa13.6□□□□□ -0.23
CLDN4-202ENST00000431918 PTH1RQ03431 593 aa13.6□□□□□ -0.23
CLDN4-202ENST00000431918 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
CLDN4-202ENST00000431918 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
CLDN4-202ENST00000431918 STARD3NLO95772 234 aa13.6□□□□□ -0.23
CLDN4-202ENST00000431918 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
CLDN4-202ENST00000431918 RAD50Q92878 1312 aa13.6□□□□□ -0.23
CLDN4-202ENST00000431918 CSPP1Q1MSJ5 1256 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 PI4K2BQ8TCG2 481 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 BTG4Q9NY30 223 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 C1orf167Q5SNV9 1468 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 GJB2P29033 226 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 HSPA4P34932 840 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
CLDN4-202ENST00000431918 PDIA4P13667 645 aaKnown RBP13.58□□□□□ -0.23
CLDN4-202ENST00000431918 PIP4K2BP78356 416 aa13.58□□□□□ -0.23
CLDN4-202ENST00000431918 SETD1AO15047 1707 aaKnown RBP13.58□□□□□ -0.24
CLDN4-202ENST00000431918 ZRSR1Q15695 479 aaKnown RBP13.58□□□□□ -0.24
CLDN4-202ENST00000431918 BICD2Q8TD16 824 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 IL25Q9H293 177 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 AOX1Q06278 1338 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 STX6O43752 255 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 FAM89AQ96GI7 184 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 BCL11BQ9C0K0 894 aaPredicted RBP13.58□□□□□ -0.24
CLDN4-202ENST00000431918 AKAP12Q02952 1782 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 SASH1O94885 1247 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 METTL24Q5JXM2 366 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 PLBD2Q8NHP8 589 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 KNDC1Q76NI1 1749 aa13.58□□□□□ -0.24
CLDN4-202ENST00000431918 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
CLDN4-202ENST00000431918 GNL2Q13823 731 aaKnown RBP13.57□□□□□ -0.24
CLDN4-202ENST00000431918 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
CLDN4-202ENST00000431918 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
CLDN4-202ENST00000431918 BRINP3Q76B58 766 aa13.57□□□□□ -0.24
CLDN4-202ENST00000431918 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
CLDN4-202ENST00000431918 IFIT5Q13325 482 aaKnown RBP13.57□□□□□ -0.24
CLDN4-202ENST00000431918 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
CLDN4-202ENST00000431918 ZSCAN31Q96LW9 406 aaPredicted RBP13.57□□□□□ -0.24
CLDN4-202ENST00000431918 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
CLDN4-202ENST00000431918 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
CLDN4-202ENST00000431918 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 DRC7Q8IY82 874 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
CLDN4-202ENST00000431918 A0A0D9SFI3 127 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 ACSBG1Q96GR2 724 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 EXOC5O00471 708 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 HAND2P61296 217 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
CLDN4-202ENST00000431918 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
CLDN4-202ENST00000431918 TFIP11Q9UBB9 837 aaKnown RBP13.55□□□□□ -0.24
CLDN4-202ENST00000431918 ISY1Q9ULR0 285 aaKnown RBP13.55□□□□□ -0.24
CLDN4-202ENST00000431918 PXDNQ92626 1479 aa13.55□□□□□ -0.24
CLDN4-202ENST00000431918 SPATA31A3Q5VYP0 1347 aa13.55□□□□□ -0.24
CLDN4-202ENST00000431918 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
CLDN4-202ENST00000431918 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
CLDN4-202ENST00000431918 TSPY26PQ9H489 355 aa13.55□□□□□ -0.24
CLDN4-202ENST00000431918 CPLX1O14810 134 aa13.55□□□□□ -0.24
CLDN4-202ENST00000431918 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
CLDN4-202ENST00000431918 LDHAL6AQ6ZMR3 332 aa13.55□□□□□ -0.24
CLDN4-202ENST00000431918 FBXW7Q969H0 707 aa13.55□□□□□ -0.24
CLDN4-202ENST00000431918 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
CLDN4-202ENST00000431918 LSG1Q9H089 658 aaKnown RBP13.55□□□□□ -0.24
CLDN4-202ENST00000431918 CCT2P78371 535 aaKnown RBP13.54□□□□□ -0.24
CLDN4-202ENST00000431918 ANKRD1Q15327 319 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 PDCP20941 246 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 SYT1P21579 422 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
CLDN4-202ENST00000431918 SH2B1Q9NRF2 756 aaPredicted RBP13.54□□□□□ -0.24
CLDN4-202ENST00000431918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLDN4-202ENST00000431918 PIK3C2AO00443 1686 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms