RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
DDR1-236ENST00000431373 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
DDR1-236ENST00000431373 TNRC6CQ9HCJ0 1690 aaKnown RBP23.73■■□□□ 1.39
DDR1-236ENST00000431373 KCNA3P22001 575 aa23.73■■□□□ 1.39
DDR1-236ENST00000431373 ERFEQ4G0M1 354 aa23.73■■□□□ 1.39
DDR1-236ENST00000431373 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
DDR1-236ENST00000431373 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
DDR1-236ENST00000431373 MRPL50Q8N5N7 158 aaKnown RBP23.73■■□□□ 1.39
DDR1-236ENST00000431373 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
DDR1-236ENST00000431373 RIC1Q4ADV7 1423 aa23.73■■□□□ 1.39
DDR1-236ENST00000431373 H0YIN7 160 aa23.72■■□□□ 1.39
DDR1-236ENST00000431373 GPR162Q16538 588 aa23.72■■□□□ 1.39
DDR1-236ENST00000431373 CACNA1SQ13698 1873 aa23.71■■□□□ 1.39
DDR1-236ENST00000431373 ARFGEF1Q9Y6D6 1849 aa23.71■■□□□ 1.39
DDR1-236ENST00000431373 NEXNQ0ZGT2 675 aa23.71■■□□□ 1.39
DDR1-236ENST00000431373 DNAAF4Q8WXU2 420 aa23.71■■□□□ 1.39
DDR1-236ENST00000431373 TRMT112Q9UI30 125 aaKnown RBP23.71■■□□□ 1.39
DDR1-236ENST00000431373 LAMB2P55268 1798 aa23.7■■□□□ 1.39
DDR1-236ENST00000431373 CCDC191Q8NCU4 936 aa23.7■■□□□ 1.38
DDR1-236ENST00000431373 BCL2L13Q9BXK5 485 aa23.7■■□□□ 1.38
DDR1-236ENST00000431373 SMC4Q9NTJ3 1288 aa23.7■■□□□ 1.38
DDR1-236ENST00000431373 PIM2Q9P1W9 311 aa23.7■■□□□ 1.38
DDR1-236ENST00000431373 WWC3Q9ULE0 1092 aa23.7■■□□□ 1.38
DDR1-236ENST00000431373 DDX60Q8IY21 1712 aaKnown RBP23.7■■□□□ 1.38
DDR1-236ENST00000431373 SH3TC1Q8TE82 1336 aa23.69■■□□□ 1.38
DDR1-236ENST00000431373 KLRG2A4D1S0 409 aaPredicted RBP23.68■■□□□ 1.38
DDR1-236ENST00000431373 CWC25Q9NXE8 425 aaPredicted RBP23.68■■□□□ 1.38
DDR1-236ENST00000431373 IGKV5-2P06315 115 aa23.67■■□□□ 1.38
DDR1-236ENST00000431373 YBX3P16989 372 aaKnown RBP eCLIP23.67■■□□□ 1.38
DDR1-236ENST00000431373 RARSP54136 660 aaKnown RBP23.67■■□□□ 1.38
DDR1-236ENST00000431373 SLC10A5Q5PT55 438 aa23.67■■□□□ 1.38
DDR1-236ENST00000431373 BCS1LQ9Y276 419 aa23.67■■□□□ 1.38
DDR1-236ENST00000431373 PTPRCP08575 1304 aa23.66■■□□□ 1.38
DDR1-236ENST00000431373 F6X3S4 739 aa23.66■■□□□ 1.38
DDR1-236ENST00000431373 SRGNP10124 158 aa23.66■■□□□ 1.38
DDR1-236ENST00000431373 SYNE4Q8N205 404 aa23.66■■□□□ 1.38
DDR1-236ENST00000431373 ZNF622Q969S3 477 aaKnown RBP eCLIP23.66■■□□□ 1.38
DDR1-236ENST00000431373 DALRD3Q5D0E6 543 aaKnown RBP23.65■■□□□ 1.38
DDR1-236ENST00000431373 STYK1Q6J9G0 422 aa23.65■■□□□ 1.38
DDR1-236ENST00000431373 ZBTB38Q8NAP3 1195 aaPredicted RBP23.65■■□□□ 1.38
DDR1-236ENST00000431373 LINS1Q8NG48 757 aa23.65■■□□□ 1.38
DDR1-236ENST00000431373 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
DDR1-236ENST00000431373 MASTLQ96GX5 879 aa23.65■■□□□ 1.38
DDR1-236ENST00000431373 NEURL1BA8MQ27 555 aa23.64■■□□□ 1.37
DDR1-236ENST00000431373 NPR1P16066 1061 aa23.64■■□□□ 1.37
DDR1-236ENST00000431373 BRPF1P55201 1214 aaPredicted RBP23.64■■□□□ 1.37
DDR1-236ENST00000431373 CWF19L2Q2TBE0 894 aaKnown RBP23.64■■□□□ 1.37
DDR1-236ENST00000431373 TTLL6Q8N841 843 aa23.64■■□□□ 1.37
DDR1-236ENST00000431373 NLRP3Q96P20 1036 aa23.64■■□□□ 1.37
DDR1-236ENST00000431373 GRIN3BO60391 1043 aa23.63■■□□□ 1.37
DDR1-236ENST00000431373 PCCAP05165 728 aaPredicted RBP23.63■■□□□ 1.37
DDR1-236ENST00000431373 HCLS1P14317 486 aaPredicted RBP23.63■■□□□ 1.37
DDR1-236ENST00000431373 CRY2Q49AN0 593 aa23.63■■□□□ 1.37
DDR1-236ENST00000431373 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
DDR1-236ENST00000431373 CHD4Q14839 1912 aa23.63■■□□□ 1.37
DDR1-236ENST00000431373 RTL5Q5HYW3 569 aaPredicted RBP23.62■■□□□ 1.37
DDR1-236ENST00000431373 CNKSR1Q969H4 720 aa23.62■■□□□ 1.37
DDR1-236ENST00000431373 MYH3P11055 1940 aa23.62■■□□□ 1.37
DDR1-236ENST00000431373 BEND3Q5T5X7 828 aa23.61■■□□□ 1.37
DDR1-236ENST00000431373 SLC4A10Q6U841 1118 aa23.61■■□□□ 1.37
DDR1-236ENST00000431373 C3orf67Q6ZVT6 689 aa23.61■■□□□ 1.37
DDR1-236ENST00000431373 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
DDR1-236ENST00000431373 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
DDR1-236ENST00000431373 IRS4O14654 1257 aaPredicted RBP23.6■■□□□ 1.37
DDR1-236ENST00000431373 GCKRQ14397 625 aa23.6■■□□□ 1.37
DDR1-236ENST00000431373 HSP90B1P14625 803 aaKnown RBP23.59■■□□□ 1.37
DDR1-236ENST00000431373 YTHDC1Q96MU7 727 aaKnown RBP23.59■■□□□ 1.37
DDR1-236ENST00000431373 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
DDR1-236ENST00000431373 GOLGB1Q14789 3259 aaKnown RBP23.59■■□□□ 1.37
DDR1-236ENST00000431373 ALDH1B1P30837 517 aa23.58■■□□□ 1.37
DDR1-236ENST00000431373 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
DDR1-236ENST00000431373 JARID2Q92833 1246 aaPredicted RBP23.58■■□□□ 1.37
DDR1-236ENST00000431373 SRCIN1Q9C0H9 1055 aa23.58■■□□□ 1.37
DDR1-236ENST00000431373 CDHR2Q9BYE9 1310 aa23.58■■□□□ 1.36
DDR1-236ENST00000431373 PRPF40BQ6NWY9 871 aaKnown RBP23.57■■□□□ 1.36
DDR1-236ENST00000431373 RBM17Q96I25 401 aaKnown RBP23.57■■□□□ 1.36
DDR1-236ENST00000431373 TAF1P21675 1872 aa23.56■■□□□ 1.36
DDR1-236ENST00000431373 H7C1W4 665 aa23.56■■□□□ 1.36
DDR1-236ENST00000431373 BCAR3O75815 825 aa23.56■■□□□ 1.36
DDR1-236ENST00000431373 ALDH1L1O75891 902 aa23.56■■□□□ 1.36
DDR1-236ENST00000431373 UBE3BQ7Z3V4 1068 aa23.56■■□□□ 1.36
DDR1-236ENST00000431373 API5Q9BZZ5 524 aaKnown RBP23.56■■□□□ 1.36
DDR1-236ENST00000431373 ARHGAP45Q92619 1136 aa23.55■■□□□ 1.36
DDR1-236ENST00000431373 CRAMP1Q96RY5 1269 aa23.55■■□□□ 1.36
DDR1-236ENST00000431373 PDE8AO60658 829 aa23.54■■□□□ 1.36
DDR1-236ENST00000431373 SF3B3Q15393 1217 aaKnown RBP23.54■■□□□ 1.36
DDR1-236ENST00000431373 FER1L6Q2WGJ9 1857 aa23.53■■□□□ 1.36
DDR1-236ENST00000431373 IPO8O15397 1037 aaKnown RBP23.53■■□□□ 1.36
DDR1-236ENST00000431373 ARHGAP27Q6ZUM4 889 aa23.53■■□□□ 1.36
DDR1-236ENST00000431373 ZNF219Q9P2Y4 722 aaPredicted RBP23.53■■□□□ 1.36
DDR1-236ENST00000431373 C21orf2O43822 256 aa23.52■■□□□ 1.36
DDR1-236ENST00000431373 CASP7P55210 303 aa23.52■■□□□ 1.36
DDR1-236ENST00000431373 DDX46Q7L014 1031 aaKnown RBP23.52■■□□□ 1.36
DDR1-236ENST00000431373 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
DDR1-236ENST00000431373 ABCC4O15439 1325 aa23.52■■□□□ 1.36
DDR1-236ENST00000431373 GRM8O00222 908 aa23.51■■□□□ 1.35
DDR1-236ENST00000431373 C9orf78Q9NZ63 289 aaPredicted RBP23.51■■□□□ 1.35
DDR1-236ENST00000431373 SBF1O95248 1867 aa23.5■■□□□ 1.35
DDR1-236ENST00000431373 CTSWP56202 376 aa23.5■■□□□ 1.35
DDR1-236ENST00000431373 SOGA3Q5TF21 947 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms