RNA–Protein interactions for RNA: ENST00000431051.5

PSMD1-204, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 1 (best)

Gene PSMD1, Length 2,506 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-204ENST00000431051 PDRG1Q9NUG6 133 aa18.13■□□□□ 0.49
PSMD1-204ENST00000431051 TMEM94Q12767 1356 aa18.13■□□□□ 0.49
PSMD1-204ENST00000431051 CCDC171Q6TFL3 1326 aa18.13■□□□□ 0.49
PSMD1-204ENST00000431051 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
PSMD1-204ENST00000431051 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
PSMD1-204ENST00000431051 EDC3Q96F86 508 aaKnown RBP18.13■□□□□ 0.49
PSMD1-204ENST00000431051 NAP1L5Q96NT1 182 aaPredicted RBP18.13■□□□□ 0.49
PSMD1-204ENST00000431051 FSD1Q9BTV5 496 aa18.13■□□□□ 0.49
PSMD1-204ENST00000431051 METTL22Q9BUU2 404 aaPredicted RBP18.13■□□□□ 0.49
PSMD1-204ENST00000431051 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
PSMD1-204ENST00000431051 RBM8AQ9Y5S9 174 aaKnown RBP18.13■□□□□ 0.49
PSMD1-204ENST00000431051 C5P01031 1676 aa18.13■□□□□ 0.49
PSMD1-204ENST00000431051 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
PSMD1-204ENST00000431051 SYT1P21579 422 aa18.12■□□□□ 0.49
PSMD1-204ENST00000431051 CNPY2Q9Y2B0 182 aa18.12■□□□□ 0.49
PSMD1-204ENST00000431051 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
PSMD1-204ENST00000431051 NECTIN1Q15223 517 aa18.11■□□□□ 0.49
PSMD1-204ENST00000431051 UBE3BQ7Z3V4 1068 aa18.11■□□□□ 0.49
PSMD1-204ENST00000431051 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.11■□□□□ 0.49
PSMD1-204ENST00000431051 CYP46A1Q9Y6A2 500 aa18.11■□□□□ 0.49
PSMD1-204ENST00000431051 NDUFB9Q9Y6M9 179 aa18.11■□□□□ 0.49
PSMD1-204ENST00000431051 STX6O43752 255 aa18.11■□□□□ 0.49
PSMD1-204ENST00000431051 TCHHQ07283 1943 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 KIF1AQ12756 1690 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 ALS2Q96Q42 1657 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 ADAMTS7Q9UKP4 1686 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 MST1RQ04912 1400 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 ZSCAN22P10073 491 aaPredicted RBP18.1■□□□□ 0.49
PSMD1-204ENST00000431051 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
PSMD1-204ENST00000431051 CREB3L3Q68CJ9 461 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 TCEANC2Q96MN5 208 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 ZSWIM6Q9HCJ5 1215 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 LRP10Q7Z4F1 713 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 NECAB1Q8N987 351 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 DCAF5Q96JK2 942 aa18.1■□□□□ 0.49
PSMD1-204ENST00000431051 VPS53Q5VIR6 699 aa18.09■□□□□ 0.49
PSMD1-204ENST00000431051 TAF6LQ9Y6J9 622 aa18.09■□□□□ 0.49
PSMD1-204ENST00000431051 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
PSMD1-204ENST00000431051 GJB2P29033 226 aa18.09■□□□□ 0.49
PSMD1-204ENST00000431051 CABP4P57796 275 aa18.09■□□□□ 0.49
PSMD1-204ENST00000431051 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
PSMD1-204ENST00000431051 CCDC9Q9Y3X0 531 aaKnown RBP18.09■□□□□ 0.49
PSMD1-204ENST00000431051 MAP4K1Q92918 833 aa18.08■□□□□ 0.49
PSMD1-204ENST00000431051 FIBPO43427 364 aa18.08■□□□□ 0.48
PSMD1-204ENST00000431051 TFCP2Q12800 502 aa18.08■□□□□ 0.48
PSMD1-204ENST00000431051 ME3Q16798 604 aa18.08■□□□□ 0.48
PSMD1-204ENST00000431051 ZNF589Q86UQ0 364 aaPredicted RBP18.08■□□□□ 0.48
PSMD1-204ENST00000431051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.08■□□□□ 0.481e-7■■■□□ 17.4
PSMD1-204ENST00000431051 A0A087WZG4 1122 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 SLC27A2O14975 620 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 CHGBP05060 677 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 ST3GAL1Q11201 340 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 DBNLQ9UJU6 430 aaKnown RBP18.07■□□□□ 0.48
PSMD1-204ENST00000431051 HIP1O00291 1037 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 F13A1P00488 732 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 PTPN12Q05209 780 aaKnown RBP18.07■□□□□ 0.48
PSMD1-204ENST00000431051 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 TPCN1Q9ULQ1 816 aa18.07■□□□□ 0.48
PSMD1-204ENST00000431051 ZSCAN30Q86W11 494 aa18.06■□□□□ 0.48
PSMD1-204ENST00000431051 KCNB2Q92953 911 aa18.06■□□□□ 0.48
PSMD1-204ENST00000431051 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
PSMD1-204ENST00000431051 LMTK3Q96Q04 1460 aa18.06■□□□□ 0.48
PSMD1-204ENST00000431051 VPS37CA5D8V6 355 aaPredicted RBP18.05■□□□□ 0.48
PSMD1-204ENST00000431051 RFX5P48382 616 aaPredicted RBP18.05■□□□□ 0.48
PSMD1-204ENST00000431051 TSPY26PQ9H489 355 aa18.05■□□□□ 0.48
PSMD1-204ENST00000431051 CHMP3Q9Y3E7 222 aa18.05■□□□□ 0.48
PSMD1-204ENST00000431051 TNNI3KQ59H18 835 aa18.05■□□□□ 0.48
PSMD1-204ENST00000431051 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
PSMD1-204ENST00000431051 COPRSQ9NQ92 184 aa18.05■□□□□ 0.48
PSMD1-204ENST00000431051 FPGT-TNNI3KV9GXZ4 949 aa18.05■□□□□ 0.48
PSMD1-204ENST00000431051 PDLIM2Q96JY6 352 aa18.04■□□□□ 0.48
PSMD1-204ENST00000431051 DNM1Q05193 864 aaKnown RBP18.04■□□□□ 0.48
PSMD1-204ENST00000431051 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
PSMD1-204ENST00000431051 MTMR6Q9Y217 621 aa18.04■□□□□ 0.48
PSMD1-204ENST00000431051 MSNP26038 577 aaKnown RBP18.03■□□□□ 0.48
PSMD1-204ENST00000431051 ZSCAN31Q96LW9 406 aaPredicted RBP18.03■□□□□ 0.48
PSMD1-204ENST00000431051 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
PSMD1-204ENST00000431051 COL18A1P39060 1754 aa18.03■□□□□ 0.48
PSMD1-204ENST00000431051 TNS3Q68CZ2 1445 aa18.03■□□□□ 0.48
PSMD1-204ENST00000431051 LMBR1LQ6UX01 489 aa18.03■□□□□ 0.48
PSMD1-204ENST00000431051 MED23Q9ULK4 1368 aa18.02■□□□□ 0.48
PSMD1-204ENST00000431051 BLOC1S2Q6QNY1 142 aa18.02■□□□□ 0.48
PSMD1-204ENST00000431051 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.48
PSMD1-204ENST00000431051 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.48
PSMD1-204ENST00000431051 TMEM87AQ8NBN3 555 aa18.02■□□□□ 0.48
PSMD1-204ENST00000431051 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.47
PSMD1-204ENST00000431051 NBPF26B4DH59 902 aa18.02■□□□□ 0.47
PSMD1-204ENST00000431051 PSMA5P28066 241 aa18.02■□□□□ 0.47
PSMD1-204ENST00000431051 NBPF14Q5TI25 921 aa18.02■□□□□ 0.47
PSMD1-204ENST00000431051 RNF20Q5VTR2 975 aa18.02■□□□□ 0.47
PSMD1-204ENST00000431051 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.47
PSMD1-204ENST00000431051 NBPF15Q8N660 670 aa18.02■□□□□ 0.47
PSMD1-204ENST00000431051 SEC62Q99442 399 aaKnown RBP18.02■□□□□ 0.47
PSMD1-204ENST00000431051 STK3Q13188 491 aa18.01■□□□□ 0.47
PSMD1-204ENST00000431051 RABL6Q3YEC7 729 aaPredicted RBP18.01■□□□□ 0.47
PSMD1-204ENST00000431051 TTLL7Q6ZT98 887 aa18.01■□□□□ 0.47
PSMD1-204ENST00000431051 FERMT3Q86UX7 667 aa18.01■□□□□ 0.47
PSMD1-204ENST00000431051 TAF5LO75529 589 aa18.01■□□□□ 0.47
PSMD1-204ENST00000431051 PHF14O94880 888 aa18.01■□□□□ 0.47
PSMD1-204ENST00000431051 ATP5JP18859 108 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms