RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 INTS3Q68E01 1043 aaKnown RBP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 NFATC2IPQ8NCF5 419 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 CCDC39Q9UFE4 941 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 GNAQP50148 359 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 ANKRD1Q15327 319 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 RUFY4Q6ZNE9 571 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 CATIPQ7Z7H3 387 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 GCNAQ96QF7 691 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 IMPG2Q9BZV3 1241 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 C6orf50Q9HD87 102 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 RIMS2Q9UQ26 1411 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 TSPY2A6NKD2 308 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 ZBBXA8MT70 800 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 LDHBP07195 334 aaKnown RBP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 NOLC1Q14978 699 aaKnown RBP eCLIP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 ZNF396Q96N95 335 aaPredicted RBP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 IPO9Q96P70 1041 aaKnown RBP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 ATP10AO60312 1499 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 CCDC85CA6NKD9 419 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 BACH1O14867 736 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 CALM1P0DP23 149 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 CALM2P0DP24 149 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 CALM3P0DP25 149 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 TTLL6Q8N841 843 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 C22orf23Q9BZE7 217 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 TAOK3Q9H2K8 898 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 SMC3Q9UQE7 1217 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 MFSD14CQ5VZR4 134 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 GIGYF2Q6Y7W6 1299 aaKnown RBP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 MSANTD4Q8NCY6 345 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 BICD2Q8TD16 824 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 LEO1Q8WVC0 666 aaPredicted RBP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 TSG101Q99816 390 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 FAM13BQ9NYF5 915 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 DACH1Q9UI36 760 aa5.25□□□□□ -1.57
LRRK2-204ENST00000430804 PSDA5PKW4 1024 aaPredicted RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 ERLIN2O94905 339 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 KRT32Q14532 448 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 AACSQ86V21 672 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 CDAN1Q8IWY9 1227 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 FTOQ9C0B1 505 aaKnown RBP eCLIP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 SPINK5Q9NQ38 1064 aaPredicted RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 THRAP3Q9Y2W1 955 aaKnown RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 TRPM2O94759 1503 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 ARHGEF37A1IGU5 675 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 TSPY3P0CV98 308 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 TSPY8P0CW00 308 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 KCTD2Q14681 263 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 RRS1Q15050 365 aaKnown RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 AKAP4Q5JQC9 854 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 NUDT18Q6ZVK8 323 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 PNMA8AQ86V59 439 aaPredicted RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 CABLES1Q8TDN4 633 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 FOXD4L1Q9NU39 408 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 STX6O43752 255 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 PDCP20941 246 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 KCNJ6P48051 423 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 MCF2L2Q86YR7 1114 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 GOPCQ9HD26 462 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 CD2APQ9Y5K6 639 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 SRGAP3O43295 1099 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 R3HDM1Q15032 1099 aaKnown RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 SMARCE1Q969G3 411 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 NAP1L4Q99733 375 aaKnown RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 ZNF644Q9H582 1327 aaPredicted RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 CASKIN1Q8WXD9 1431 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 CCDC194A0A1B0GVG4 234 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 FGFR1OPO95684 399 aaKnown RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 SSR1P43307 286 aaKnown RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 SNX16P57768 344 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 KANK4Q5T7N3 995 aaPredicted RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 NAT10Q9H0A0 1025 aaKnown RBP5.24□□□□□ -1.57
LRRK2-204ENST00000430804 KCNG1Q9UIX4 513 aa5.24□□□□□ -1.57
LRRK2-204ENST00000430804 PHACTR2O75167 634 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 CENPQQ7L2Z9 268 aaPredicted RBP5.23□□□□□ -1.57
LRRK2-204ENST00000430804 SLC16A10Q8TF71 515 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 SECISBP2LQ93073 1101 aaKnown RBP5.23□□□□□ -1.57
LRRK2-204ENST00000430804 HTATIP2Q9BUP3 242 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 KIF21BO75037 1637 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 NBPF26B4DH59 902 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 ACTN1P12814 892 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 GLIPR1L2Q4G1C9 344 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 NAA16Q6N069 864 aaPredicted RBP5.23□□□□□ -1.57
LRRK2-204ENST00000430804 PAGR1Q9BTK6 254 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 KIF14Q15058 1648 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 SPDYE3A6NKU9 549 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 KCNG4Q8TDN1 519 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 SEPT11Q9NVA2 429 aaKnown RBP5.23□□□□□ -1.57
LRRK2-204ENST00000430804 TRAPPC8Q9Y2L5 1435 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 KBTBD13C9JR72 458 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 NEFHP12036 1026 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 SEPT7Q16181 437 aaKnown RBP5.23□□□□□ -1.57
LRRK2-204ENST00000430804 NBPF20Q3BBV1 942 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 CIAPIN1Q6FI81 312 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 SYCP3Q8IZU3 236 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 USHBP1Q8N6Y0 703 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 RAB23Q9ULC3 237 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 KIF7Q2M1P5 1343 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 KIAA1841Q6NSI8 718 aa5.23□□□□□ -1.57
LRRK2-204ENST00000430804 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms