RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ITPK1Q13572 414 aa10.75□□□□□ -0.69
NUP98-207ENST00000429801 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
NUP98-207ENST00000429801 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
NUP98-207ENST00000429801 MAP3K2Q9Y2U5 619 aa10.75□□□□□ -0.69
NUP98-207ENST00000429801 ADCY9O60503 1353 aa10.74□□□□□ -0.69
NUP98-207ENST00000429801 KIF20AO95235 890 aa10.74□□□□□ -0.69
NUP98-207ENST00000429801 IL6STP40189 918 aaPredicted RBP10.74□□□□□ -0.69
NUP98-207ENST00000429801 MAP7D2Q96T17 732 aa10.74□□□□□ -0.69
NUP98-207ENST00000429801 CCDC87Q9NVE4 849 aa10.74□□□□□ -0.69
NUP98-207ENST00000429801 ZBTB7BO15156 539 aaPredicted RBP10.74□□□□□ -0.69
NUP98-207ENST00000429801 CRKLP46109 303 aaKnown RBP10.74□□□□□ -0.69
NUP98-207ENST00000429801 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
NUP98-207ENST00000429801 PLBD2Q8NHP8 589 aa10.74□□□□□ -0.69
NUP98-207ENST00000429801 SRCIN1Q9C0H9 1055 aa10.74□□□□□ -0.69
NUP98-207ENST00000429801 ZBTB1Q9Y2K1 713 aa10.74□□□□□ -0.69
NUP98-207ENST00000429801 EP400Q96L91 3159 aa10.73□□□□□ -0.69
NUP98-207ENST00000429801 ESPNB1AK53 854 aa10.73□□□□□ -0.69
NUP98-207ENST00000429801 NEXNQ0ZGT2 675 aa10.73□□□□□ -0.69
NUP98-207ENST00000429801 ZBTB40Q9NUA8 1239 aa10.73□□□□□ -0.69
NUP98-207ENST00000429801 ATP10DQ9P241 1426 aa10.73□□□□□ -0.69
NUP98-207ENST00000429801 ZNF330Q9Y3S2 320 aaPredicted RBP10.73□□□□□ -0.69
NUP98-207ENST00000429801 LY75O60449 1722 aa10.73□□□□□ -0.69
NUP98-207ENST00000429801 INTS5Q6P9B9 1019 aaKnown RBP10.73□□□□□ -0.69
NUP98-207ENST00000429801 KIF6Q6ZMV9 814 aa10.73□□□□□ -0.69
NUP98-207ENST00000429801 CGNQ9P2M7 1197 aaKnown RBP10.73□□□□□ -0.69
NUP98-207ENST00000429801 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
NUP98-207ENST00000429801 BEND3Q5T5X7 828 aa10.72□□□□□ -0.69
NUP98-207ENST00000429801 EP400NLQ6ZTU2 488 aa10.72□□□□□ -0.69
NUP98-207ENST00000429801 LINC00116Q8NCU8 138 aa10.72□□□□□ -0.69
NUP98-207ENST00000429801 CNTNAP4Q9C0A0 1308 aa10.72□□□□□ -0.69
NUP98-207ENST00000429801 COL5A3P25940 1745 aaPredicted RBP10.72□□□□□ -0.69
NUP98-207ENST00000429801 ALDH1L1O75891 902 aa10.72□□□□□ -0.69
NUP98-207ENST00000429801 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
NUP98-207ENST00000429801 RC3H1Q5TC82 1133 aaKnown RBP10.72□□□□□ -0.69
NUP98-207ENST00000429801 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
NUP98-207ENST00000429801 METTL22Q9BUU2 404 aaPredicted RBP10.72□□□□□ -0.69
NUP98-207ENST00000429801 PLSCR1O15162 318 aa10.71□□□□□ -0.69
NUP98-207ENST00000429801 EIF5P55010 431 aaKnown RBP10.71□□□□□ -0.69
NUP98-207ENST00000429801 TTLL7Q6ZT98 887 aa10.71□□□□□ -0.69
NUP98-207ENST00000429801 N4BP2Q86UW6 1770 aaPredicted RBP10.71□□□□□ -0.7
NUP98-207ENST00000429801 APBA3O96018 575 aa10.71□□□□□ -0.7
NUP98-207ENST00000429801 GNAI3P08754 354 aa10.71□□□□□ -0.7
NUP98-207ENST00000429801 PDE4AP27815 886 aa10.71□□□□□ -0.7
NUP98-207ENST00000429801 RREB1Q92766 1687 aa10.7□□□□□ -0.7
NUP98-207ENST00000429801 KCNQ4P56696 695 aa10.7□□□□□ -0.7
NUP98-207ENST00000429801 MYD88Q99836 296 aa10.7□□□□□ -0.7
NUP98-207ENST00000429801 IBTKQ9P2D0 1353 aaPredicted RBP10.7□□□□□ -0.7
NUP98-207ENST00000429801 A0A087WZG4 1122 aa10.69□□□□□ -0.7
NUP98-207ENST00000429801 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.7
NUP98-207ENST00000429801 ZBTB3Q9H5J0 574 aa10.69□□□□□ -0.7
NUP98-207ENST00000429801 MAP3K15Q6ZN16 1313 aa10.69□□□□□ -0.7
NUP98-207ENST00000429801 ERVV-1B6SEH8 477 aa10.69□□□□□ -0.7
NUP98-207ENST00000429801 PTMAP06454 111 aaKnown RBP10.69□□□□□ -0.7
NUP98-207ENST00000429801 DZIP3Q86Y13 1208 aaKnown RBP10.69□□□□□ -0.7
NUP98-207ENST00000429801 MEIS3Q99687 375 aa10.69□□□□□ -0.7
NUP98-207ENST00000429801 ARFGEF2Q9Y6D5 1785 aa10.69□□□□□ -0.7
NUP98-207ENST00000429801 TXNRD1Q16881 649 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 USP44Q9H0E7 712 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 COL15A1P39059 1388 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 NEURL1BA8MQ27 555 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 RPS6KA4O75676 772 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 CWF19L2Q2TBE0 894 aaKnown RBP10.68□□□□□ -0.7
NUP98-207ENST00000429801 RWDD1Q9H446 243 aaPredicted RBP10.68□□□□□ -0.7
NUP98-207ENST00000429801 LRRC4BQ9NT99 713 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 C9orf78Q9NZ63 289 aaPredicted RBP10.68□□□□□ -0.7
NUP98-207ENST00000429801 RTCBQ9Y3I0 505 aaKnown RBP10.68□□□□□ -0.7
NUP98-207ENST00000429801 PCDHB15Q9Y5E8 787 aa10.68□□□□□ -0.7
NUP98-207ENST00000429801 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
NUP98-207ENST00000429801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.67□□□□□ -0.7
NUP98-207ENST00000429801 LETM1O95202 739 aaPredicted RBP10.67□□□□□ -0.7
NUP98-207ENST00000429801 GNAI2P04899 355 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 UBTFL1P0CB47 393 aaPredicted RBP10.67□□□□□ -0.7
NUP98-207ENST00000429801 TCIRG1Q13488 830 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
NUP98-207ENST00000429801 AK7Q96M32 723 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 TAF1LQ8IZX4 1826 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 GNPATO15228 680 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 GCKRQ14397 625 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 BACH2Q9BYV9 841 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 C4BP0C0L5 1744 aa10.67□□□□□ -0.7
NUP98-207ENST00000429801 ATP5J2-PTCD1G3V325 749 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 GRM8O00222 908 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
NUP98-207ENST00000429801 RPAP2Q8IXW5 612 aaPredicted RBP10.66□□□□□ -0.7
NUP98-207ENST00000429801 CCDC191Q8NCU4 936 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 PLCD4Q9BRC7 762 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 GTPBP4Q9BZE4 634 aaKnown RBP10.66□□□□□ -0.7
NUP98-207ENST00000429801 C1orf115Q9H7X2 142 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 TRIM28Q13263 835 aaKnown RBP10.66□□□□□ -0.7
NUP98-207ENST00000429801 CENPQQ7L2Z9 268 aaPredicted RBP10.66□□□□□ -0.7
NUP98-207ENST00000429801 PROM2Q8N271 834 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 MPNDQ8N594 471 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 CWC25Q9NXE8 425 aaPredicted RBP10.66□□□□□ -0.7
NUP98-207ENST00000429801 ZNF652Q9Y2D9 606 aa10.66□□□□□ -0.7
NUP98-207ENST00000429801 TNS1Q9HBL0 1735 aaKnown RBP10.66□□□□□ -0.7
NUP98-207ENST00000429801 UTYO14607 1347 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms