RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 GPBP1L1Q9HC44 474 aaPredicted RBP22.44■■□□□ 1.18
CTSD-203ENST00000429746 PDZRN3Q9UPQ7 1066 aa22.44■■□□□ 1.18
CTSD-203ENST00000429746 PDE6BP35913 854 aa22.43■■□□□ 1.18
CTSD-203ENST00000429746 CRY2Q49AN0 593 aa22.43■■□□□ 1.18
CTSD-203ENST00000429746 HSP90AB3PQ58FF7 597 aa22.43■■□□□ 1.18
CTSD-203ENST00000429746 ARHGAP27Q6ZUM4 889 aa22.43■■□□□ 1.18
CTSD-203ENST00000429746 SYNE4Q8N205 404 aa22.43■■□□□ 1.18
CTSD-203ENST00000429746 SLC4A2P04920 1241 aa22.42■■□□□ 1.18
CTSD-203ENST00000429746 TRIM28Q13263 835 aaKnown RBP22.42■■□□□ 1.18
CTSD-203ENST00000429746 NYXQ9GZU5 481 aa22.42■■□□□ 1.18
CTSD-203ENST00000429746 SBF1O95248 1867 aa22.41■■□□□ 1.18
CTSD-203ENST00000429746 H0YIN7 160 aa22.41■■□□□ 1.18
CTSD-203ENST00000429746 SLC10A5Q5PT55 438 aa22.41■■□□□ 1.18
CTSD-203ENST00000429746 FER1L6Q2WGJ9 1857 aa22.41■■□□□ 1.18
CTSD-203ENST00000429746 ATP5J2-PTCD1G3V325 749 aa22.4■■□□□ 1.18
CTSD-203ENST00000429746 CHMP4AQ9BY43 222 aa22.4■■□□□ 1.18
CTSD-203ENST00000429746 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
CTSD-203ENST00000429746 COL4A1P02462 1669 aa22.39■■□□□ 1.18
CTSD-203ENST00000429746 RNF123Q5XPI4 1314 aa22.39■■□□□ 1.18
CTSD-203ENST00000429746 FLIIQ13045 1269 aa22.39■■□□□ 1.17
CTSD-203ENST00000429746 STYK1Q6J9G0 422 aa22.39■■□□□ 1.17
CTSD-203ENST00000429746 ZNF428Q96B54 188 aa22.39■■□□□ 1.17
CTSD-203ENST00000429746 UTP14AQ9BVJ6 771 aaKnown RBP22.39■■□□□ 1.17
CTSD-203ENST00000429746 STK31Q9BXU1 1019 aa22.39■■□□□ 1.17
CTSD-203ENST00000429746 PI4KAP2A4QPH2 592 aa22.38■■□□□ 1.17
CTSD-203ENST00000429746 IGKV5-2P06315 115 aa22.38■■□□□ 1.17
CTSD-203ENST00000429746 KSR2Q6VAB6 950 aa22.38■■□□□ 1.17
CTSD-203ENST00000429746 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
CTSD-203ENST00000429746 TTLL6Q8N841 843 aa22.38■■□□□ 1.17
CTSD-203ENST00000429746 PI4KAP1Q8N8J0 262 aa22.38■■□□□ 1.17
CTSD-203ENST00000429746 C7orf43Q8WVR3 580 aa22.38■■□□□ 1.17
CTSD-203ENST00000429746 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
CTSD-203ENST00000429746 PRELPP51888 382 aa22.37■■□□□ 1.17
CTSD-203ENST00000429746 RIC3Q7Z5B4 369 aa22.37■■□□□ 1.17
CTSD-203ENST00000429746 MASTLQ96GX5 879 aa22.37■■□□□ 1.17
CTSD-203ENST00000429746 MAP3K2Q9Y2U5 619 aa22.37■■□□□ 1.17
CTSD-203ENST00000429746 SLC51AQ86UW1 340 aa22.36■■□□□ 1.17
CTSD-203ENST00000429746 MYD88Q99836 296 aa22.36■■□□□ 1.17
CTSD-203ENST00000429746 TAF1P21675 1872 aa22.36■■□□□ 1.17
CTSD-203ENST00000429746 NPHP1O15259 732 aa22.35■■□□□ 1.17
CTSD-203ENST00000429746 NPR1P16066 1061 aa22.35■■□□□ 1.17
CTSD-203ENST00000429746 HOXA10P31260 410 aaPredicted RBP22.35■■□□□ 1.17
CTSD-203ENST00000429746 ZNF622Q969S3 477 aaKnown RBP eCLIP22.35■■□□□ 1.17
CTSD-203ENST00000429746 PRPF40BQ6NWY9 871 aaKnown RBP22.34■■□□□ 1.17
CTSD-203ENST00000429746 TRMT112Q9UI30 125 aaKnown RBP22.34■■□□□ 1.17
CTSD-203ENST00000429746 SH3TC1Q8TE82 1336 aa22.33■■□□□ 1.17
CTSD-203ENST00000429746 NFKBIEO00221 500 aa22.33■■□□□ 1.17
CTSD-203ENST00000429746 HCLS1P14317 486 aaPredicted RBP22.33■■□□□ 1.17
CTSD-203ENST00000429746 MRPL50Q8N5N7 158 aaKnown RBP22.33■■□□□ 1.17
CTSD-203ENST00000429746 FAM89AQ96GI7 184 aa22.33■■□□□ 1.17
CTSD-203ENST00000429746 CCDC88AQ3V6T2 1871 aa22.32■■□□□ 1.16
CTSD-203ENST00000429746 DDX58O95786 925 aaKnown RBP22.32■■□□□ 1.16
CTSD-203ENST00000429746 GTF2E1P29083 439 aaPredicted RBP22.32■■□□□ 1.16
CTSD-203ENST00000429746 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
CTSD-203ENST00000429746 SSH1Q8WYL5 1049 aa22.32■■□□□ 1.16
CTSD-203ENST00000429746 CNKSR1Q969H4 720 aa22.32■■□□□ 1.16
CTSD-203ENST00000429746 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
CTSD-203ENST00000429746 C9orf131Q5VYM1 1079 aa22.31■■□□□ 1.16
CTSD-203ENST00000429746 OLFM4Q6UX06 510 aa22.31■■□□□ 1.16
CTSD-203ENST00000429746 ZNF526Q8TF50 670 aaPredicted RBP22.31■■□□□ 1.16
CTSD-203ENST00000429746 NEURL1BA8MQ27 555 aa22.3■■□□□ 1.16
CTSD-203ENST00000429746 C21orf2O43822 256 aa22.3■■□□□ 1.16
CTSD-203ENST00000429746 CWF19L2Q2TBE0 894 aaKnown RBP22.3■■□□□ 1.16
CTSD-203ENST00000429746 ZC3H4Q9UPT8 1303 aaKnown RBP22.3■■□□□ 1.16
CTSD-203ENST00000429746 F6X3S4 739 aa22.29■■□□□ 1.16
CTSD-203ENST00000429746 RASSF7Q02833 373 aa22.29■■□□□ 1.16
CTSD-203ENST00000429746 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
CTSD-203ENST00000429746 ZBTB38Q8NAP3 1195 aaPredicted RBP22.29■■□□□ 1.16
CTSD-203ENST00000429746 DNAAF4Q8WXU2 420 aa22.29■■□□□ 1.16
CTSD-203ENST00000429746 LRRC37AA6NMS7 1700 aa22.28■■□□□ 1.16
CTSD-203ENST00000429746 DICER1Q9UPY3 1922 aaKnown RBP22.28■■□□□ 1.16
CTSD-203ENST00000429746 KIF3CO14782 793 aa22.28■■□□□ 1.16
CTSD-203ENST00000429746 PCCAP05165 728 aaPredicted RBP22.28■■□□□ 1.16
CTSD-203ENST00000429746 CASP7P55210 303 aa22.28■■□□□ 1.16
CTSD-203ENST00000429746 NLRP3Q96P20 1036 aa22.28■■□□□ 1.16
CTSD-203ENST00000429746 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
CTSD-203ENST00000429746 CWC25Q9NXE8 425 aaPredicted RBP22.28■■□□□ 1.16
CTSD-203ENST00000429746 ZBED9Q6R2W3 1325 aa22.28■■□□□ 1.16
CTSD-203ENST00000429746 MYH3P11055 1940 aa22.27■■□□□ 1.16
CTSD-203ENST00000429746 SF3B3Q15393 1217 aaKnown RBP22.27■■□□□ 1.16
CTSD-203ENST00000429746 RTL5Q5HYW3 569 aaPredicted RBP22.27■■□□□ 1.16
CTSD-203ENST00000429746 BEND3Q5T5X7 828 aa22.27■■□□□ 1.16
CTSD-203ENST00000429746 JARID2Q92833 1246 aaPredicted RBP22.27■■□□□ 1.16
CTSD-203ENST00000429746 ABCC4O15439 1325 aa22.27■■□□□ 1.16
CTSD-203ENST00000429746 IRS4O14654 1257 aaPredicted RBP22.26■■□□□ 1.15
CTSD-203ENST00000429746 RNF181Q9P0P0 153 aa22.26■■□□□ 1.15
CTSD-203ENST00000429746 ZNF219Q9P2Y4 722 aaPredicted RBP22.26■■□□□ 1.15
CTSD-203ENST00000429746 CDHR2Q9BYE9 1310 aa22.26■■□□□ 1.15
CTSD-203ENST00000429746 TIAM2Q8IVF5 1701 aa22.26■■□□□ 1.15
CTSD-203ENST00000429746 H7C1W4 665 aa22.25■■□□□ 1.15
CTSD-203ENST00000429746 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
CTSD-203ENST00000429746 ALDH1L2Q3SY69 923 aa22.25■■□□□ 1.15
CTSD-203ENST00000429746 BCL2L13Q9BXK5 485 aa22.25■■□□□ 1.15
CTSD-203ENST00000429746 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
CTSD-203ENST00000429746 LTBP3Q9NS15 1303 aa22.25■■□□□ 1.15
CTSD-203ENST00000429746 LTBP1Q14766 1721 aa22.24■■□□□ 1.15
CTSD-203ENST00000429746 LMNB1P20700 586 aa22.24■■□□□ 1.15
CTSD-203ENST00000429746 ALDH1B1P30837 517 aa22.24■■□□□ 1.15
CTSD-203ENST00000429746 GCKRQ14397 625 aa22.24■■□□□ 1.15
CTSD-203ENST00000429746 LINS1Q8NG48 757 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms