RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 LARSQ9P2J5 1176 aaKnown RBP8.67□□□□□ -1.02
SYNPO2-202ENST00000429713 IQSEC3Q9UPP2 1182 aaPredicted RBP8.67□□□□□ -1.02
SYNPO2-202ENST00000429713 ADCY5O95622 1261 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 ANAPC4Q9UJX5 808 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 SMC1AQ14683 1233 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 SPTLC3Q9NUV7 552 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 LUC7L2Q9Y383 392 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 DDX58O95786 925 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 GNAI3P08754 354 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 MAP3K5Q99683 1374 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 CPLX1O14810 134 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 CCDC175P0C221 793 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 CCDC47Q96A33 483 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 ABCC2Q92887 1545 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 CDK5RAP3Q96JB5 506 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 SYNMO15061 1565 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 ALDH1L2Q3SY69 923 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 RPUSD2Q8IZ73 545 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 CCDC114Q96M63 670 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 ZFYP08048 801 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 FOSBP53539 338 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
SYNPO2-202ENST00000429713 SSH2Q76I76 1423 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 MX1P20591 662 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 ARHGAP29Q52LW3 1261 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 IQCDQ96DY2 449 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 ZFP91Q96JP5 570 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 FEZ2Q9UHY8 353 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 DNAI1Q9UI46 699 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 INPP5BP32019 993 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 DYNC1I2Q13409 638 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 KRT32Q14532 448 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 MSL1Q68DK7 614 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 SDF4Q9BRK5 362 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 DDX41Q9UJV9 622 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 PRPHP41219 470 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 PYM1Q9BRP8 204 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 TRIM27P14373 513 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 KCNJ6P48051 423 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 SYNE3Q6ZMZ3 975 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 CCDC121Q6ZUS5 278 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 SSH1Q8WYL5 1049 aa8.65□□□□□ -1.02
SYNPO2-202ENST00000429713 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 GUCY2CP25092 1073 aa8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 ISM2Q6H9L7 571 aa8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 CACNA2D4Q7Z3S7 1137 aa8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 CLASRPQ8N2M8 674 aaKnown RBP8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 OTUD6BQ8N6M0 293 aa8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 FAM71BQ8TC56 605 aa8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 VCX3BQ9H321 246 aa8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 VCX3AQ9NNX9 186 aa8.65□□□□□ -1.03
SYNPO2-202ENST00000429713 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 CSB-PGBD3P0DP91 1061 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 AFAP1Q8N556 730 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 GTF2E1P29083 439 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 CCDC186Q7Z3E2 898 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 JAKMIP1Q96N16 626 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 CLASP1Q7Z460 1538 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 SLC4A2P04920 1241 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 RCSD1Q6JBY9 416 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 FAM76AQ8TAV0 307 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 PIK3C2GO75747 1445 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 CCDC174Q6PII3 467 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 C16orf45Q96MC5 204 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 IL16Q14005 1332 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 PPFIBP1Q86W92 1011 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 MPNDQ8N594 471 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 PSD3Q9NYI0 1048 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 MICAL3Q7RTP6 2002 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 COL17A1Q9UMD9 1497 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 CLUL1Q15846 466 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 PRAM1Q96QH2 718 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 QRICH2Q9H0J4 1663 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 RWDD2BP57060 319 aa8.64□□□□□ -1.03
SYNPO2-202ENST00000429713 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 CYP46A1Q9Y6A2 500 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 CCDC151A5D8V7 595 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 FCHSD1Q86WN1 690 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 PDLIM2Q96JY6 352 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 THEGQ9P2T0 379 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 ATP2B1P20020 1258 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 RABGGTAQ92696 567 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 FCHSD2O94868 740 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 PANK2Q9BZ23 570 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 CLNS1AP54105 237 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 WDR78Q5VTH9 848 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 EFCAB8A8MWE9 144 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 TBC1D22AQ8WUA7 517 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 NUP133Q8WUM0 1156 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 CDK19Q9BWU1 502 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 TOMM22Q9NS69 142 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 HOMER3Q9NSC5 361 aa8.63□□□□□ -1.03
SYNPO2-202ENST00000429713 ZRANB2O95218 330 aaKnown RBP eCLIP8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 PLCB4Q15147 1175 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 PPFIA4O75335 1185 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms