RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 NAP1L1P55209 391 aaKnown RBP20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 DDX21Q9NR30 783 aaKnown RBP eCLIP20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 MLH3Q9UHC1 1453 aa20.09■□□□□ 0.81
SMARCA4-203ENST00000429416 IL13P35225 146 aa20.09■□□□□ 0.81
SMARCA4-203ENST00000429416 MATR3P43243 847 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■■■■ 30.1
SMARCA4-203ENST00000429416 CCDC196A0A1B0GTZ2 297 aa20.08■□□□□ 0.81
SMARCA4-203ENST00000429416 ZNF408Q9H9D4 720 aa20.08■□□□□ 0.81
SMARCA4-203ENST00000429416 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.81
SMARCA4-203ENST00000429416 KIAA0232Q92628 1395 aa20.08■□□□□ 0.8
SMARCA4-203ENST00000429416 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.8
SMARCA4-203ENST00000429416 UFL1O94874 794 aa20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 ANKRD2Q9GZV1 360 aa20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 TRMT1LQ7Z2T5 733 aaKnown RBP20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 CATIPQ7Z7H3 387 aa20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 ZSCAN31Q96LW9 406 aaPredicted RBP20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 MBD5Q9P267 1494 aa20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 PARP10Q53GL7 1025 aa20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 TTC37Q6PGP7 1564 aa20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 NAT10Q9H0A0 1025 aaKnown RBP20.07■□□□□ 0.8
SMARCA4-203ENST00000429416 BCS1LQ9Y276 419 aa20.06■□□□□ 0.8
SMARCA4-203ENST00000429416 MFSD6Q6ZSS7 791 aa20.06■□□□□ 0.8
SMARCA4-203ENST00000429416 PAF1Q8N7H5 531 aa20.06■□□□□ 0.8
SMARCA4-203ENST00000429416 ARHGEF12Q9NZN5 1544 aa20.06■□□□□ 0.8
SMARCA4-203ENST00000429416 LARGE2Q8N3Y3 721 aa20.06■□□□□ 0.8
SMARCA4-203ENST00000429416 MRPL50Q8N5N7 158 aaKnown RBP20.06■□□□□ 0.8
SMARCA4-203ENST00000429416 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 KAT14Q9H8E8 782 aa20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 SLC9C2Q5TAH2 1124 aa20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 ARHGAP45Q92619 1136 aa20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 FAM13BQ9NYF5 915 aa20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 MAGEC2Q9UBF1 373 aaPredicted RBP20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 SLC4A4Q9Y6R1 1079 aa20.05■□□□□ 0.8
SMARCA4-203ENST00000429416 KRT27Q7Z3Y8 459 aa20.04■□□□□ 0.8
SMARCA4-203ENST00000429416 CCDC144CPQ8IYA2 1237 aa20.04■□□□□ 0.8
SMARCA4-203ENST00000429416 PDILTQ8N807 584 aa20.04■□□□□ 0.8
SMARCA4-203ENST00000429416 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
SMARCA4-203ENST00000429416 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
SMARCA4-203ENST00000429416 PRPF40AO75400 957 aaKnown RBP20.03■□□□□ 0.8
SMARCA4-203ENST00000429416 PLBD2Q8NHP8 589 aa20.03■□□□□ 0.8
SMARCA4-203ENST00000429416 TMEM67Q5HYA8 995 aa20.03■□□□□ 0.8
SMARCA4-203ENST00000429416 CCDC83Q8IWF9 413 aa20.03■□□□□ 0.8
SMARCA4-203ENST00000429416 K7ELQ4 463 aaPredicted RBP20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 TSPY3P0CV98 308 aa20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 TSPY8P0CW00 308 aa20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 DPP8Q6V1X1 898 aaPredicted RBP20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 FAM196AQ6ZSG2 479 aa20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 VAMP4O75379 141 aa20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 EIF6P56537 245 aaKnown RBP20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 HOMER1Q86YM7 354 aa20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 PDCL3Q9H2J4 239 aa20.02■□□□□ 0.8
SMARCA4-203ENST00000429416 LDHBP07195 334 aaKnown RBP20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 KRT85P78386 507 aa20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 HMGB1P09429 215 aaKnown RBP20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 SKAP1Q86WV1 359 aa20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 RAB11FIP4Q86YS3 637 aa20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 CCT2P78371 535 aaKnown RBP20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 PARD3Q8TEW0 1356 aa20.01■□□□□ 0.79
SMARCA4-203ENST00000429416 ERVV-2B6SEH9 535 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 NLRP5P59047 1200 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 DHX8Q14562 1220 aaKnown RBP20■□□□□ 0.79
SMARCA4-203ENST00000429416 ARHGEF5Q12774 1597 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 HECW2Q9P2P5 1572 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 ITGA6P23229 1130 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 FERMT3Q86UX7 667 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 MIGA1Q8NAN2 632 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 ROBO2Q9HCK4 1378 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 GGA1Q9UJY5 639 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 GUCY1B3Q02153 619 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 MICU3Q86XE3 530 aa20■□□□□ 0.79
SMARCA4-203ENST00000429416 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
SMARCA4-203ENST00000429416 STIM1Q13586 685 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 ZNF592Q92610 1267 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 SYCP1Q15431 976 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 LARP6Q9BRS8 491 aaKnown RBP19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 TANGO6Q9C0B7 1094 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 KIF5BP33176 963 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 ATP8B2P98198 1209 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 RNF214Q8ND24 703 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 FLAD1Q8NFF5 587 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 BRINP3Q76B58 766 aa19.99■□□□□ 0.79
SMARCA4-203ENST00000429416 CCDC194A0A1B0GVG4 234 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 PHKG2P15735 406 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 SEPT12Q8IYM1 358 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 EHMT1Q9H9B1 1298 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 PLS1Q14651 629 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 TFCP2Q12800 502 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 MAGEB6P1A0A0J9YX57 407 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 PPFIA3O75145 1194 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 ZFYP08048 801 aaPredicted RBP19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 G2E3Q7L622 706 aa19.98■□□□□ 0.79
SMARCA4-203ENST00000429416 PDE8AO60658 829 aa19.97■□□□□ 0.79
SMARCA4-203ENST00000429416 TNNI2P48788 182 aa19.97■□□□□ 0.79
SMARCA4-203ENST00000429416 PPP4R3AQ6IN85 833 aa19.97■□□□□ 0.79
SMARCA4-203ENST00000429416 SPATA32Q96LK8 384 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 306.9 ms