RNA–Protein interactions for RNA: ENST00000429016.2

TRMT112P4-201, Transcript of tRNA methyltransferase subunit 11-2 pseudogene 4, humanhuman

BASIC

Gene TRMT112P4, Length 379 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT112P4-201ENST00000429016 CNKSR1Q969H4 720 aa11.73□□□□□ -0.53
TRMT112P4-201ENST00000429016 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
TRMT112P4-201ENST00000429016 RASSF7Q02833 373 aa11.72□□□□□ -0.53
TRMT112P4-201ENST00000429016 PRPF40BQ6NWY9 871 aaKnown RBP11.72□□□□□ -0.53
TRMT112P4-201ENST00000429016 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
TRMT112P4-201ENST00000429016 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
TRMT112P4-201ENST00000429016 CHMP4AQ9BY43 222 aa11.72□□□□□ -0.53
TRMT112P4-201ENST00000429016 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
TRMT112P4-201ENST00000429016 NFKBIEO00221 500 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 C21orf2O43822 256 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 PRELPP51888 382 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 SLC10A5Q5PT55 438 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 C9orf131Q5VYM1 1079 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 C7orf43Q8WVR3 580 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 CCDC88AQ3V6T2 1871 aa11.71□□□□□ -0.53
TRMT112P4-201ENST00000429016 CACNA1FO60840 1977 aa11.7□□□□□ -0.54
TRMT112P4-201ENST00000429016 TIAM2Q8IVF5 1701 aa11.7□□□□□ -0.54
TRMT112P4-201ENST00000429016 VAMP4O75379 141 aa11.7□□□□□ -0.54
TRMT112P4-201ENST00000429016 EXOSC9Q06265 439 aaKnown RBP11.7□□□□□ -0.54
TRMT112P4-201ENST00000429016 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
TRMT112P4-201ENST00000429016 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
TRMT112P4-201ENST00000429016 SNED1Q8TER0 1413 aa11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 DICER1Q9UPY3 1922 aaKnown RBP11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 ATP5J2-PTCD1G3V325 749 aa11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 HOXA10P31260 410 aaPredicted RBP11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 TRIM28Q13263 835 aaKnown RBP11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 STK31Q9BXU1 1019 aa11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 MYH16Q9H6N6 1097 aa11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 RNF181Q9P0P0 153 aa11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
TRMT112P4-201ENST00000429016 SH3TC1Q8TE82 1336 aa11.68□□□□□ -0.54
TRMT112P4-201ENST00000429016 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
TRMT112P4-201ENST00000429016 ALDH1B1P30837 517 aa11.68□□□□□ -0.54
TRMT112P4-201ENST00000429016 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
TRMT112P4-201ENST00000429016 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
TRMT112P4-201ENST00000429016 G2E3Q7L622 706 aa11.68□□□□□ -0.54
TRMT112P4-201ENST00000429016 NLRP3Q96P20 1036 aa11.68□□□□□ -0.54
TRMT112P4-201ENST00000429016 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 LMNB1P20700 586 aa11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 OLFM4Q6UX06 510 aa11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 ZNF428Q96B54 188 aa11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 CRAMP1Q96RY5 1269 aa11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 MYD88Q99836 296 aa11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
TRMT112P4-201ENST00000429016 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 PI4KAP2A4QPH2 592 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 CCDC93Q567U6 631 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 MIER1Q8N108 512 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 PI4KAP1Q8N8J0 262 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 FAM89AQ96GI7 184 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 TAF1P21675 1872 aa11.66□□□□□ -0.54
TRMT112P4-201ENST00000429016 ABCC4O15439 1325 aa11.65□□□□□ -0.54
TRMT112P4-201ENST00000429016 FLIIQ13045 1269 aa11.65□□□□□ -0.54
TRMT112P4-201ENST00000429016 SLC51AQ86UW1 340 aa11.65□□□□□ -0.54
TRMT112P4-201ENST00000429016 ZBTB38Q8NAP3 1195 aaPredicted RBP11.65□□□□□ -0.54
TRMT112P4-201ENST00000429016 CCDC191Q8NCU4 936 aa11.65□□□□□ -0.54
TRMT112P4-201ENST00000429016 COL4A1P02462 1669 aa11.65□□□□□ -0.55
TRMT112P4-201ENST00000429016 E9PSI1 815 aa11.64□□□□□ -0.55
TRMT112P4-201ENST00000429016 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
TRMT112P4-201ENST00000429016 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRMT112P4-201ENST00000429016 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
TRMT112P4-201ENST00000429016 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
TRMT112P4-201ENST00000429016 CWC25Q9NXE8 425 aaPredicted RBP11.64□□□□□ -0.55
TRMT112P4-201ENST00000429016 LRRC37AA6NMS7 1700 aa11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 KIF3CO14782 793 aa11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 PCCAP05165 728 aaPredicted RBP11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 SF3B3Q15393 1217 aaKnown RBP11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 CC2D2BQ6DHV5 1058 aa11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 RTKN2Q8IZC4 609 aa11.63□□□□□ -0.55
TRMT112P4-201ENST00000429016 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 GRAPQ13588 217 aa11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 GRAPLQ8TC17 118 aaPredicted RBP11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 PSMD1Q99460 953 aa11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 NMRK2Q9NPI5 230 aa11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 COL4A5P29400 1685 aa11.62□□□□□ -0.55
TRMT112P4-201ENST00000429016 CDHR2Q9BYE9 1310 aa11.61□□□□□ -0.55
TRMT112P4-201ENST00000429016 WDR90Q96KV7 1748 aa11.61□□□□□ -0.55
TRMT112P4-201ENST00000429016 MYH3P11055 1940 aa11.61□□□□□ -0.55
TRMT112P4-201ENST00000429016 GLTPD2A6NH11 291 aa11.61□□□□□ -0.55
TRMT112P4-201ENST00000429016 NEURL1BA8MQ27 555 aa11.61□□□□□ -0.55
TRMT112P4-201ENST00000429016 C1QTNF8P60827 252 aa11.61□□□□□ -0.55
TRMT112P4-201ENST00000429016 NEXNQ0ZGT2 675 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms