RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CEP85Q6P2H3 762 aa11.96□□□□□ -0.5
HMGCLL1-206ENST00000428842 ATP10DQ9P241 1426 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 PLSCR1O15162 318 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 RGS3P49796 1198 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 TRAPPC3LQ5T215 181 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 PPP1R42Q7Z4L9 355 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
HMGCLL1-206ENST00000428842 C16orf71Q8IYS4 520 aaPredicted RBP11.94□□□□□ -0.5
HMGCLL1-206ENST00000428842 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-206ENST00000428842 ZPR1O75312 459 aa11.94□□□□□ -0.5
HMGCLL1-206ENST00000428842 TSHZ3Q63HK5 1081 aa11.94□□□□□ -0.5
HMGCLL1-206ENST00000428842 COL4A1P02462 1669 aa11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 SRGAP3O43295 1099 aa11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 GNAI2P04899 355 aa11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 OTUD7AQ8TE49 926 aaPredicted RBP11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 ISCA1Q9BUE6 129 aa11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
HMGCLL1-206ENST00000428842 PNPLA7Q6ZV29 1317 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 WTIPA6NIX2 430 aaPredicted RBP11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 GYS1P13807 737 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 CASP7P55210 303 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 LMBR1LQ6UX01 489 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 ANKRD44Q8N8A2 993 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 MS4A1P11836 297 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 ERFEQ4G0M1 354 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 LNPKQ9C0E8 428 aa11.92□□□□□ -0.5
HMGCLL1-206ENST00000428842 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 SNAP23O00161 211 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 NFIXQ14938 502 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 KCNA4P22459 653 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 IL1RAPL2Q9NP60 686 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 RREB1Q92766 1687 aa11.91□□□□□ -0.5
HMGCLL1-206ENST00000428842 FOXO4P98177 505 aa11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 DDR1Q08345 913 aa11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 ABCC12Q96J65 1359 aa11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 H7C1W4 665 aa11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 ZBTB7AO95365 584 aa11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 BAG6P46379 1132 aa11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 R3HDM1Q15032 1099 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-206ENST00000428842 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.51
HMGCLL1-206ENST00000428842 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 GNAI3P08754 354 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 SLC15A2Q16348 729 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 GREM2Q9H772 168 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 PDZRN3Q9UPQ7 1066 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 NPHP1O15259 732 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 NTSR2O95665 410 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
HMGCLL1-206ENST00000428842 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 PDE4AP27815 886 aa11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 NBPF5PQ86XG9 351 aaPredicted RBP11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 SETDB2Q96T68 719 aa11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 CHMP4AQ9BY43 222 aa11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
HMGCLL1-206ENST00000428842 ANKRD36CQ5JPF3 1778 aa11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 ZBTB38Q8NAP3 1195 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 PCNTO95613 3336 aa11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 CICQ96RK0 1608 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 MMP10P09238 476 aa11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 BCORQ6W2J9 1755 aa11.87□□□□□ -0.51
HMGCLL1-206ENST00000428842 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
HMGCLL1-206ENST00000428842 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
HMGCLL1-206ENST00000428842 RWDD1Q9H446 243 aaPredicted RBP11.86□□□□□ -0.51
HMGCLL1-206ENST00000428842 SSFA2P28290 1259 aa11.86□□□□□ -0.51
HMGCLL1-206ENST00000428842 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
HMGCLL1-206ENST00000428842 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
HMGCLL1-206ENST00000428842 UTYO14607 1347 aa11.85□□□□□ -0.51
HMGCLL1-206ENST00000428842 PCCAP05165 728 aaPredicted RBP11.85□□□□□ -0.51
HMGCLL1-206ENST00000428842 SCN7AQ01118 1682 aa11.85□□□□□ -0.51
HMGCLL1-206ENST00000428842 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
HMGCLL1-206ENST00000428842 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
HMGCLL1-206ENST00000428842 STK32BQ9NY57 414 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms