RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
CECR3-201ENST00000428828 KSR2Q6VAB6 950 aa14.06□□□□□ -0.16
CECR3-201ENST00000428828 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.06□□□□□ -0.16
CECR3-201ENST00000428828 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
CECR3-201ENST00000428828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.05□□□□□ -0.16
CECR3-201ENST00000428828 DNAAF4Q8WXU2 420 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 ABCC4O15439 1325 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 KIAA1211Q6ZU35 1233 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 TMEM57Q8N5G2 664 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 PLBD2Q8NHP8 589 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
CECR3-201ENST00000428828 MYD88Q99836 296 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 STK32BQ9NY57 414 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 SRP68Q9UHB9 627 aaKnown RBP14.05□□□□□ -0.16
CECR3-201ENST00000428828 COG6Q9Y2V7 657 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 MAP3K15Q6ZN16 1313 aa14.05□□□□□ -0.16
CECR3-201ENST00000428828 PXDNLA1KZ92 1463 aa14.04□□□□□ -0.16
CECR3-201ENST00000428828 RGS3P49796 1198 aa14.04□□□□□ -0.16
CECR3-201ENST00000428828 HLFQ16534 295 aa14.04□□□□□ -0.16
CECR3-201ENST00000428828 A0A087WZG4 1122 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 DDX11L8A8MPP1 907 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 HMGB2P26583 209 aaKnown RBP14.03□□□□□ -0.16
CECR3-201ENST00000428828 RFC4P35249 363 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 TRAK2O60296 914 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 ZPR1O75312 459 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 CAMTA2O94983 1202 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 SSFA2P28290 1259 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 USPL1Q5W0Q7 1092 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 SKAP1Q86WV1 359 aa14.03□□□□□ -0.16
CECR3-201ENST00000428828 ATP5J2-PTCD1G3V325 749 aa14.02□□□□□ -0.16
CECR3-201ENST00000428828 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.16
CECR3-201ENST00000428828 PDE3AQ14432 1141 aa14.02□□□□□ -0.16
CECR3-201ENST00000428828 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.16
CECR3-201ENST00000428828 CASZ1Q86V15 1759 aa14.02□□□□□ -0.16
CECR3-201ENST00000428828 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
CECR3-201ENST00000428828 PTMSP20962 102 aa14.02□□□□□ -0.17
CECR3-201ENST00000428828 GPTP24298 496 aa14.02□□□□□ -0.17
CECR3-201ENST00000428828 METTL22Q9BUU2 404 aaPredicted RBP14.02□□□□□ -0.17
CECR3-201ENST00000428828 USP42Q9H9J4 1324 aaKnown RBP14.01□□□□□ -0.17
CECR3-201ENST00000428828 ADRA2BP18089 450 aa14.01□□□□□ -0.17
CECR3-201ENST00000428828 MVPQ14764 893 aaKnown RBP14.01□□□□□ -0.17
CECR3-201ENST00000428828 HS1BP3Q53T59 392 aa14.01□□□□□ -0.17
CECR3-201ENST00000428828 GIGYF2Q6Y7W6 1299 aaKnown RBP14.01□□□□□ -0.17
CECR3-201ENST00000428828 PPP1R9BQ96SB3 815 aa14.01□□□□□ -0.17
CECR3-201ENST00000428828 SRCIN1Q9C0H9 1055 aa14.01□□□□□ -0.17
CECR3-201ENST00000428828 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
CECR3-201ENST00000428828 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
CECR3-201ENST00000428828 ATP10DQ9P241 1426 aa14□□□□□ -0.17
CECR3-201ENST00000428828 CCT4P50991 539 aaKnown RBP14□□□□□ -0.17
CECR3-201ENST00000428828 CCDC173Q0VFZ6 552 aa14□□□□□ -0.17
CECR3-201ENST00000428828 BEND3Q5T5X7 828 aa14□□□□□ -0.17
CECR3-201ENST00000428828 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
CECR3-201ENST00000428828 ZSCAN30Q86W11 494 aa14□□□□□ -0.17
CECR3-201ENST00000428828 COL23A1Q86Y22 540 aaPredicted RBP14□□□□□ -0.17
CECR3-201ENST00000428828 COL24A1Q17RW2 1714 aa14□□□□□ -0.17
CECR3-201ENST00000428828 ERVV-1B6SEH8 477 aa14□□□□□ -0.17
CECR3-201ENST00000428828 IGKV5-2P06315 115 aa14□□□□□ -0.17
CECR3-201ENST00000428828 ZNF652Q9Y2D9 606 aa14□□□□□ -0.17
CECR3-201ENST00000428828 FAM177BA6PVY3 158 aa13.99□□□□□ -0.17
CECR3-201ENST00000428828 TCIRG1Q13488 830 aa13.99□□□□□ -0.17
CECR3-201ENST00000428828 INTS3Q68E01 1043 aaKnown RBP13.99□□□□□ -0.17
CECR3-201ENST00000428828 BCL2L12Q9HB09 334 aa13.99□□□□□ -0.17
CECR3-201ENST00000428828 MYH3P11055 1940 aa13.99□□□□□ -0.17
CECR3-201ENST00000428828 NEURL1BA8MQ27 555 aa13.98□□□□□ -0.17
CECR3-201ENST00000428828 LINS1Q8NG48 757 aa13.98□□□□□ -0.17
CECR3-201ENST00000428828 TBC1D32Q96NH3 1257 aa13.98□□□□□ -0.17
CECR3-201ENST00000428828 UPF2Q9HAU5 1272 aaKnown RBP13.98□□□□□ -0.17
CECR3-201ENST00000428828 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
CECR3-201ENST00000428828 TBC1D9BQ66K14 1250 aa13.98□□□□□ -0.17
CECR3-201ENST00000428828 FLAD1Q8NFF5 587 aa13.98□□□□□ -0.17
CECR3-201ENST00000428828 JARID2Q92833 1246 aaPredicted RBP13.98□□□□□ -0.17
CECR3-201ENST00000428828 SLKQ9H2G2 1235 aaPredicted RBP13.98□□□□□ -0.17
CECR3-201ENST00000428828 NIP7Q9Y221 180 aaKnown RBP eCLIP13.98□□□□□ -0.17
CECR3-201ENST00000428828 UBN2Q6ZU65 1347 aa13.97□□□□□ -0.17
CECR3-201ENST00000428828 DMTNQ08495 405 aa13.97□□□□□ -0.17
CECR3-201ENST00000428828 MSL1Q68DK7 614 aa13.97□□□□□ -0.17
CECR3-201ENST00000428828 PDGFDQ9GZP0 370 aaPredicted RBP13.97□□□□□ -0.17
CECR3-201ENST00000428828 DDX19BQ9UMR2 479 aa13.97□□□□□ -0.17
CECR3-201ENST00000428828 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
CECR3-201ENST00000428828 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.17
CECR3-201ENST00000428828 GYS1P13807 737 aa13.96□□□□□ -0.17
CECR3-201ENST00000428828 SKOR2Q2VWA4 1001 aaPredicted RBP13.96□□□□□ -0.17
CECR3-201ENST00000428828 DDX60Q8IY21 1712 aaKnown RBP13.96□□□□□ -0.17
CECR3-201ENST00000428828 MEIS3Q99687 375 aa13.96□□□□□ -0.17
CECR3-201ENST00000428828 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
CECR3-201ENST00000428828 C9orf78Q9NZ63 289 aaPredicted RBP13.96□□□□□ -0.17
CECR3-201ENST00000428828 LAMB2P55268 1798 aa13.96□□□□□ -0.17
CECR3-201ENST00000428828 ALDH1L1O75891 902 aa13.96□□□□□ -0.18
CECR3-201ENST00000428828 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.18
CECR3-201ENST00000428828 CLEC4GQ6UXB4 293 aa13.96□□□□□ -0.18
CECR3-201ENST00000428828 ISCA1Q9BUE6 129 aa13.96□□□□□ -0.18
CECR3-201ENST00000428828 C1orf115Q9H7X2 142 aa13.96□□□□□ -0.18
CECR3-201ENST00000428828 CWC25Q9NXE8 425 aaPredicted RBP13.96□□□□□ -0.18
CECR3-201ENST00000428828 PSDA5PKW4 1024 aaPredicted RBP13.95□□□□□ -0.18
CECR3-201ENST00000428828 GCKRQ14397 625 aa13.95□□□□□ -0.18
CECR3-201ENST00000428828 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms