RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 NTSR2O95665 410 aa19.4■□□□□ 0.7
IMP4-204ENST00000428740 HOXA10P31260 410 aaPredicted RBP19.4■□□□□ 0.7
IMP4-204ENST00000428740 WWC1Q8IX03 1113 aa19.4■□□□□ 0.7
IMP4-204ENST00000428740 RBM17Q96I25 401 aaKnown RBP19.4■□□□□ 0.7
IMP4-204ENST00000428740 RIC1Q4ADV7 1423 aa19.4■□□□□ 0.7
IMP4-204ENST00000428740 TOMM70O94826 608 aa19.39■□□□□ 0.69
IMP4-204ENST00000428740 CCDC30Q5VVM6 783 aa19.39■□□□□ 0.69
IMP4-204ENST00000428740 CRAMP1Q96RY5 1269 aa19.39■□□□□ 0.69
IMP4-204ENST00000428740 IL16Q14005 1332 aa19.39■□□□□ 0.69
IMP4-204ENST00000428740 GLTPD2A6NH11 291 aa19.38■□□□□ 0.69
IMP4-204ENST00000428740 NLRP10Q86W26 655 aa19.38■□□□□ 0.69
IMP4-204ENST00000428740 C16orf71Q8IYS4 520 aaPredicted RBP19.38■□□□□ 0.69
IMP4-204ENST00000428740 TMX4Q9H1E5 349 aaPredicted RBP19.38■□□□□ 0.69
IMP4-204ENST00000428740 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
IMP4-204ENST00000428740 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
IMP4-204ENST00000428740 TRMT112Q9UI30 125 aaKnown RBP19.37■□□□□ 0.69
IMP4-204ENST00000428740 NUP98P52948 1817 aa19.37■□□□□ 0.69
IMP4-204ENST00000428740 GOLGA2Q08379 1002 aa19.36■□□□□ 0.69
IMP4-204ENST00000428740 WDR63Q8IWG1 891 aa19.36■□□□□ 0.69
IMP4-204ENST00000428740 C8orf58Q8NAV2 365 aa19.36■□□□□ 0.69
IMP4-204ENST00000428740 NMRK2Q9NPI5 230 aa19.36■□□□□ 0.69
IMP4-204ENST00000428740 ABCC12Q96J65 1359 aa19.35■□□□□ 0.69
IMP4-204ENST00000428740 SH3TC1Q8TE82 1336 aa19.35■□□□□ 0.69
IMP4-204ENST00000428740 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
IMP4-204ENST00000428740 PRELPP51888 382 aa19.35■□□□□ 0.69
IMP4-204ENST00000428740 FKBP4Q02790 459 aaKnown RBP eCLIP19.35■□□□□ 0.69
IMP4-204ENST00000428740 TRIM28Q13263 835 aaKnown RBP19.35■□□□□ 0.69
IMP4-204ENST00000428740 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
IMP4-204ENST00000428740 RRAGCQ9HB90 399 aa19.35■□□□□ 0.69
IMP4-204ENST00000428740 HSP90B1P14625 803 aaKnown RBP19.34■□□□□ 0.69
IMP4-204ENST00000428740 VEGFAP15692 232 aaPredicted RBP19.34■□□□□ 0.69
IMP4-204ENST00000428740 BBOX1O75936 387 aa19.33■□□□□ 0.68
IMP4-204ENST00000428740 RBM46Q8TBY0 533 aaKnown RBP19.33■□□□□ 0.68
IMP4-204ENST00000428740 ISCA1Q9BUE6 129 aa19.33■□□□□ 0.68
IMP4-204ENST00000428740 STK31Q9BXU1 1019 aa19.33■□□□□ 0.68
IMP4-204ENST00000428740 COL11A2P13942 1736 aaPredicted RBP19.32■□□□□ 0.68
IMP4-204ENST00000428740 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
IMP4-204ENST00000428740 PSMD1Q99460 953 aa19.32■□□□□ 0.68
IMP4-204ENST00000428740 SBF1O95248 1867 aa19.32■□□□□ 0.68
IMP4-204ENST00000428740 SLX4Q8IY92 1834 aa19.32■□□□□ 0.68
IMP4-204ENST00000428740 HSPA6P17066 643 aa19.31■□□□□ 0.68
IMP4-204ENST00000428740 FSTL1Q12841 308 aa19.3■□□□□ 0.68
IMP4-204ENST00000428740 TWISTNBQ3B726 338 aaPredicted RBP19.3■□□□□ 0.68
IMP4-204ENST00000428740 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
IMP4-204ENST00000428740 SYNE4Q8N205 404 aa19.3■□□□□ 0.68
IMP4-204ENST00000428740 TSR2Q969E8 191 aaKnown RBP19.3■□□□□ 0.68
IMP4-204ENST00000428740 PHAXQ9H814 394 aaKnown RBP19.3■□□□□ 0.68
IMP4-204ENST00000428740 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
IMP4-204ENST00000428740 PPEF1O14829 653 aaPredicted RBP19.29■□□□□ 0.68
IMP4-204ENST00000428740 HCLS1P14317 486 aaPredicted RBP19.29■□□□□ 0.68
IMP4-204ENST00000428740 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
IMP4-204ENST00000428740 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
IMP4-204ENST00000428740 IARSP41252 1262 aaKnown RBP19.28■□□□□ 0.68
IMP4-204ENST00000428740 C3orf67Q6ZVT6 689 aa19.28■□□□□ 0.68
IMP4-204ENST00000428740 TMC4Q7Z404 712 aa19.28■□□□□ 0.68
IMP4-204ENST00000428740 CCDC191Q8NCU4 936 aa19.28■□□□□ 0.68
IMP4-204ENST00000428740 JDP2Q8WYK2 163 aa19.28■□□□□ 0.68
IMP4-204ENST00000428740 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
IMP4-204ENST00000428740 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
IMP4-204ENST00000428740 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
IMP4-204ENST00000428740 FER1L6Q2WGJ9 1857 aa19.27■□□□□ 0.68
IMP4-204ENST00000428740 SP8Q8IXZ3 490 aa19.27■□□□□ 0.68
IMP4-204ENST00000428740 FAM89AQ96GI7 184 aa19.27■□□□□ 0.68
IMP4-204ENST00000428740 MYH16Q9H6N6 1097 aa19.27■□□□□ 0.68
IMP4-204ENST00000428740 ZNF277Q9NRM2 450 aaPredicted RBP19.27■□□□□ 0.68
IMP4-204ENST00000428740 SF3B3Q15393 1217 aaKnown RBP19.26■□□□□ 0.67
IMP4-204ENST00000428740 OLFM4Q6UX06 510 aa19.26■□□□□ 0.67
IMP4-204ENST00000428740 KSR2Q6VAB6 950 aa19.26■□□□□ 0.67
IMP4-204ENST00000428740 ZBTB38Q8NAP3 1195 aaPredicted RBP19.26■□□□□ 0.67
IMP4-204ENST00000428740 SMC1BQ8NDV3 1235 aa19.26■□□□□ 0.67
IMP4-204ENST00000428740 SUPT20HQ8NEM7 779 aa19.26■□□□□ 0.67
IMP4-204ENST00000428740 METTL22Q9BUU2 404 aaPredicted RBP19.26■□□□□ 0.67
IMP4-204ENST00000428740 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
IMP4-204ENST00000428740 APLP1P51693 650 aa19.25■□□□□ 0.67
IMP4-204ENST00000428740 NEXNQ0ZGT2 675 aa19.25■□□□□ 0.67
IMP4-204ENST00000428740 GRAPQ13588 217 aa19.25■□□□□ 0.67
IMP4-204ENST00000428740 GRAPLQ8TC17 118 aaPredicted RBP19.25■□□□□ 0.67
IMP4-204ENST00000428740 MYD88Q99836 296 aa19.25■□□□□ 0.67
IMP4-204ENST00000428740 ABCC4O15439 1325 aa19.25■□□□□ 0.67
IMP4-204ENST00000428740 IQCA1LA6NCM1 817 aa19.24■□□□□ 0.67
IMP4-204ENST00000428740 IRS4O14654 1257 aaPredicted RBP19.24■□□□□ 0.67
IMP4-204ENST00000428740 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
IMP4-204ENST00000428740 CWC25Q9NXE8 425 aaPredicted RBP19.24■□□□□ 0.67
IMP4-204ENST00000428740 FANCIQ9NVI1 1328 aa19.24■□□□□ 0.67
IMP4-204ENST00000428740 FZD9O00144 591 aa19.23■□□□□ 0.67
IMP4-204ENST00000428740 DDNO94850 711 aaPredicted RBP19.23■□□□□ 0.67
IMP4-204ENST00000428740 MAP3K2Q9Y2U5 619 aa19.23■□□□□ 0.67
IMP4-204ENST00000428740 TNRC6CQ9HCJ0 1690 aaKnown RBP19.23■□□□□ 0.67
IMP4-204ENST00000428740 PI4KAP2A4QPH2 592 aa19.22■□□□□ 0.67
IMP4-204ENST00000428740 VAMP4O75379 141 aa19.22■□□□□ 0.67
IMP4-204ENST00000428740 PCCAP05165 728 aaPredicted RBP19.22■□□□□ 0.67
IMP4-204ENST00000428740 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
IMP4-204ENST00000428740 LARGE2Q8N3Y3 721 aa19.22■□□□□ 0.67
IMP4-204ENST00000428740 MPNDQ8N594 471 aa19.22■□□□□ 0.67
IMP4-204ENST00000428740 PI4KAP1Q8N8J0 262 aa19.22■□□□□ 0.67
IMP4-204ENST00000428740 L3MBTL3Q96JM7 780 aaPredicted RBP19.22■□□□□ 0.67
IMP4-204ENST00000428740 ANKRD36CQ5JPF3 1778 aa19.21■□□□□ 0.67
IMP4-204ENST00000428740 POTECB2RU33 542 aa19.21■□□□□ 0.67
IMP4-204ENST00000428740 DPP8Q6V1X1 898 aaPredicted RBP19.21■□□□□ 0.67
IMP4-204ENST00000428740 RTFDC1Q9BY42 306 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms