RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KIF5BP33176 963 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 ACTN2P35609 894 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 UBE4AQ14139 1066 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 SYCP3Q8IZU3 236 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 CDC5LQ99459 802 aaKnown RBP10.32□□□□□ -0.76
CTNND1-208ENST00000428599 C19orf44Q9H6X5 657 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 ZNF213O14771 459 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 BICD1Q96G01 975 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 LMAN1P49257 510 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 TDRD12Q587J7 1177 aaKnown RBP10.31□□□□□ -0.76
CTNND1-208ENST00000428599 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 DDX23Q9BUQ8 820 aaKnown RBP10.31□□□□□ -0.76
CTNND1-208ENST00000428599 TEX13AQ9BXU3 409 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-208ENST00000428599 KLHL10Q6JEL2 608 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 LRRC27Q9C0I9 530 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
CTNND1-208ENST00000428599 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 FLIIQ13045 1269 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 CCDC174Q6PII3 467 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 C8orf76Q96K31 380 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 HDAC9Q9UKV0 1011 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 KIF2AO00139 706 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-208ENST00000428599 PAFAH1B1P43034 410 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 GSTO1P78417 241 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 PDE4BQ07343 736 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 ZNF354CQ86Y25 554 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 TCP11L1Q9NUJ3 509 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 GOLGA8AA7E2F4 631 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 GOLGA8BA8MQT2 603 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 YEATS4O95619 227 aa10.31□□□□□ -0.76
CTNND1-208ENST00000428599 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-208ENST00000428599 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
CTNND1-208ENST00000428599 SMARCA5O60264 1052 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-208ENST00000428599 KCNA6P17658 529 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 TRAF1Q13077 416 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 UBXN4Q92575 508 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 ANO10Q9NW15 660 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 ATP10AO60312 1499 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 PRC1O43663 620 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 RFC4P35249 363 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 GRM1Q13255 1194 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 CCDC40Q4G0X9 1142 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 SREK1Q8WXA9 508 aaKnown RBP10.3□□□□□ -0.76
CTNND1-208ENST00000428599 MBIPQ9NS73 344 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 IFIT3O14879 490 aaKnown RBP10.3□□□□□ -0.76
CTNND1-208ENST00000428599 CASQ1P31415 396 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 TMCO3Q6UWJ1 677 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 CCDC83Q8IWF9 413 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 ALS2CR12Q96Q35 445 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 PYM1Q9BRP8 204 aaKnown RBP10.3□□□□□ -0.76
CTNND1-208ENST00000428599 EIF2AK4Q9P2K8 1649 aaKnown RBP10.3□□□□□ -0.76
CTNND1-208ENST00000428599 SFPQP23246 707 aaKnown RBP eCLIP10.3□□□□□ -0.761e-8■■■□□ 15.1
CTNND1-208ENST00000428599 PPP4R3BQ5MIZ7 849 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 TCERG1LQ5VWI1 586 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 PPP1R42Q7Z4L9 355 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 FAM114A1Q8IWE2 563 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 NUP88Q99567 741 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-208ENST00000428599 KAT14Q9H8E8 782 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 ATP7AQ04656 1500 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 FSD2A1L4K1 749 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 USP37Q86T82 979 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 ACSBG1Q96GR2 724 aa10.3□□□□□ -0.76
CTNND1-208ENST00000428599 TNNT1P13805 278 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 ABCC1P33527 1531 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 ASXL1Q8IXJ9 1541 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 PTPRCP08575 1304 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 PRPF40BQ6NWY9 871 aaKnown RBP10.29□□□□□ -0.76
CTNND1-208ENST00000428599 NAA15Q9BXJ9 866 aaKnown RBP10.29□□□□□ -0.76
CTNND1-208ENST00000428599 SNRPA1P09661 255 aaKnown RBP10.29□□□□□ -0.76
CTNND1-208ENST00000428599 MX1P20591 662 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 MTIF2P46199 727 aaKnown RBP10.29□□□□□ -0.76
CTNND1-208ENST00000428599 DDX12PQ92771 950 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 SYNCQ9H7C4 482 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 B4DLN1 442 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 ATP5J2-PTCD1G3V325 749 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 MRPL12P52815 198 aaKnown RBP10.29□□□□□ -0.76
CTNND1-208ENST00000428599 BOLA2Q9H3K6 86 aa10.29□□□□□ -0.76
CTNND1-208ENST00000428599 MAPKBP1O60336 1514 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 STX6O43752 255 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 TBCAO75347 108 aaKnown RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 CCDC172P0C7W6 258 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 TOP1P11387 765 aaKnown RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 TRMT1LQ7Z2T5 733 aaKnown RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 CKAP2LQ8IYA6 745 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 ERMNQ8TAM6 284 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 GIMAP7Q8NHV1 300 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 IKBKGQ9Y6K9 419 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 DNMT1P26358 1616 aaKnown RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 UHRF1BP1Q6BDS2 1440 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 RAB3IL1Q8TBN0 382 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 PRKCSHP14314 528 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 NCBP1Q09161 790 aaKnown RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 KIF4BQ2VIQ3 1234 aa10.28□□□□□ -0.76
CTNND1-208ENST00000428599 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms