RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 ICMTO60725 284 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 SERINC3Q13530 473 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 NBPF20Q3BBV1 942 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 JDP2Q8WYK2 163 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 ZNF69Q9UC07 566 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 TCEAL9Q9UHQ7 104 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 IGF1RP08069 1367 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 NRDCO43847 1150 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 STK10O94804 968 aaKnown RBP4.52□□□□□ -1.69
CCDC30-203ENST00000428554 ARID5AQ03989 594 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 INTS6LQ5JSJ4 861 aaKnown RBP4.52□□□□□ -1.69
CCDC30-203ENST00000428554 NBPF11Q86T75 865 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.52□□□□□ -1.69
CCDC30-203ENST00000428554 MRFAP1L1Q96HT8 127 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 SFI1A8K8P3 1242 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 PPP1R12AO14974 1030 aaPredicted RBP4.52□□□□□ -1.69
CCDC30-203ENST00000428554 ATP2B4P23634 1241 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 HLTFQ14527 1009 aaKnown RBP eCLIP4.52□□□□□ -1.69
CCDC30-203ENST00000428554 NAP1L4Q99733 375 aaKnown RBP4.52□□□□□ -1.69
CCDC30-203ENST00000428554 ACBD3Q9H3P7 528 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 SFMBT1Q9UHJ3 866 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 TPX2Q9ULW0 747 aaKnown RBP4.52□□□□□ -1.69
CCDC30-203ENST00000428554 TLL2Q9Y6L7 1015 aa4.52□□□□□ -1.69
CCDC30-203ENST00000428554 ERVH48-1M5A8F1 160 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 STAU1O95793 577 aaKnown RBP4.51□□□□□ -1.69
CCDC30-203ENST00000428554 VARSP26640 1264 aaKnown RBP4.51□□□□□ -1.69
CCDC30-203ENST00000428554 MAPK1P28482 360 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 WNT7BP56706 349 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 ARID5BQ14865 1188 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 ZRSR2Q15696 482 aaKnown RBP4.51□□□□□ -1.69
CCDC30-203ENST00000428554 RNF20Q5VTR2 975 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 VASH1Q7L8A9 365 aaPredicted RBP4.51□□□□□ -1.69
CCDC30-203ENST00000428554 TAS1R3Q7RTX0 852 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 TRIM50Q86XT4 487 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 RUNDC1Q96C34 613 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 PAGR1Q9BTK6 254 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.51□□□□□ -1.69
CCDC30-203ENST00000428554 A6NJY4 79 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 GNALP38405 381 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 SWI5Q1ZZU3 235 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 RC3H1Q5TC82 1133 aaKnown RBP4.51□□□□□ -1.69
CCDC30-203ENST00000428554 CCDC102BQ68D86 513 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 SIX5Q8N196 739 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 TMEM87AQ8NBN3 555 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 TPCN2Q8NHX9 752 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 TMPRSS4Q9NRS4 437 aa4.51□□□□□ -1.69
CCDC30-203ENST00000428554 ATP1A2P50993 1020 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 SETDB1Q15047 1291 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 CCDC174Q6PII3 467 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 CASC1Q6TDU7 716 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 EHBP1Q8NDI1 1231 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 GAS2L2Q8NHY3 880 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 PPM1EQ8WY54 764 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 FGRP09769 529 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 NOS2P35228 1153 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 GRM5P41594 1212 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 RPIAP49247 311 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 HDAC1Q13547 482 aaPredicted RBP4.5□□□□□ -1.69
CCDC30-203ENST00000428554 TMC4Q7Z404 712 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 MCF2L2Q86YR7 1114 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 SEPT12Q8IYM1 358 aa4.5□□□□□ -1.69
CCDC30-203ENST00000428554 RNPC3Q96LT9 517 aaKnown RBP4.5□□□□□ -1.69
CCDC30-203ENST00000428554 THRAP3Q9Y2W1 955 aaKnown RBP4.5□□□□□ -1.69
CCDC30-203ENST00000428554 V9GY48 417 aaPredicted RBP4.5□□□□□ -1.69
CCDC30-203ENST00000428554 TIMM44O43615 452 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 PRMT3O60678 531 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 CAND2O75155 1236 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 FSHRP23945 695 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 NBPF1Q3BBV0 1214 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 TMEM95Q3KNT9 176 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 ERICH6BQ5W0A0 696 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 ZKSCAN2Q63HK3 967 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 ZNF622Q969S3 477 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 PRIMPOLQ96LW4 560 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 IER2Q9BTL4 223 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 CDV3Q9UKY7 258 aaKnown RBP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 MAP4K5Q9Y4K4 846 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 LDHAP00338 332 aaKnown RBP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 P4HBP07237 508 aaKnown RBP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 USP4Q13107 963 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 SAFB2Q14151 953 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 ODR4Q5SWX8 454 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 TTC39BQ5VTQ0 682 aaPredicted RBP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 CEP89Q96ST8 783 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 PRKD2Q9BZL6 878 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 BICDL2A1A5D9 508 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 SIAH2O43255 324 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 SEC13P55735 322 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 FMR1Q06787 632 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 C1orf131Q8NDD1 294 aaKnown RBP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 CDK15Q96Q40 435 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 CYLDQ9NQC7 956 aa4.49□□□□□ -1.69
CCDC30-203ENST00000428554 FEZ2Q9UHY8 353 aaPredicted RBP4.49□□□□□ -1.69
CCDC30-203ENST00000428554 TMEM238LA0A1B0GVL6 79 aa4.48□□□□□ -1.69
CCDC30-203ENST00000428554 C21orf2O43822 256 aa4.48□□□□□ -1.69
CCDC30-203ENST00000428554 FAM163BP0C2L3 166 aa4.48□□□□□ -1.69
CCDC30-203ENST00000428554 DNAJA1P31689 397 aaKnown RBP4.48□□□□□ -1.69
CCDC30-203ENST00000428554 TBC1D10BQ4KMP7 808 aaPredicted RBP4.48□□□□□ -1.69
CCDC30-203ENST00000428554 ARSHQ5FYA8 562 aa4.48□□□□□ -1.69
CCDC30-203ENST00000428554 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms