RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 SH2B1Q9NRF2 756 aaPredicted RBP18.77■□□□□ 0.6
GHDC-203ENST00000428494 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.6
GHDC-203ENST00000428494 ZNF710Q8N1W2 664 aa18.77■□□□□ 0.6
GHDC-203ENST00000428494 KCNB2Q92953 911 aa18.77■□□□□ 0.6
GHDC-203ENST00000428494 EVI5LQ96CN4 794 aa18.77■□□□□ 0.6
GHDC-203ENST00000428494 SIL1Q9H173 461 aa18.77■□□□□ 0.6
GHDC-203ENST00000428494 KLHDC4Q8TBB5 520 aa18.76■□□□□ 0.59
GHDC-203ENST00000428494 IP6K1Q92551 441 aa18.76■□□□□ 0.59
GHDC-203ENST00000428494 TFIP11Q9UBB9 837 aaKnown RBP18.76■□□□□ 0.59
GHDC-203ENST00000428494 DBF4Q9UBU7 674 aaPredicted RBP18.76■□□□□ 0.59
GHDC-203ENST00000428494 AIMP1Q12904 312 aaKnown RBP18.76■□□□□ 0.59
GHDC-203ENST00000428494 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
GHDC-203ENST00000428494 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
GHDC-203ENST00000428494 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
GHDC-203ENST00000428494 A0A0D9SFI3 127 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 SLC27A2O14975 620 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 HOXB7P09629 217 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 STK3Q13188 491 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 CKAP2LQ8IYA6 745 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 SPTLC3Q9NUV7 552 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 GPATCH3Q96I76 525 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 SUCLG2Q96I99 432 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 CRYBG1Q9Y4K1 1723 aa18.75■□□□□ 0.59
GHDC-203ENST00000428494 PRIMPOLQ96LW4 560 aa18.74■□□□□ 0.59
GHDC-203ENST00000428494 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
GHDC-203ENST00000428494 CCDC192P0DO97 292 aa18.74■□□□□ 0.59
GHDC-203ENST00000428494 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
GHDC-203ENST00000428494 LUZP1Q86V48 1076 aa18.74■□□□□ 0.59
GHDC-203ENST00000428494 KIAA1524Q8TCG1 905 aa18.74■□□□□ 0.59
GHDC-203ENST00000428494 EDC3Q96F86 508 aaKnown RBP18.74■□□□□ 0.59
GHDC-203ENST00000428494 GIGYF1O75420 1035 aaPredicted RBP18.73■□□□□ 0.59
GHDC-203ENST00000428494 PRDM10Q9NQV6 1147 aa18.73■□□□□ 0.59
GHDC-203ENST00000428494 KRT85P78386 507 aa18.72■□□□□ 0.59
GHDC-203ENST00000428494 HMGN5P82970 282 aaKnown RBP18.72■□□□□ 0.59
GHDC-203ENST00000428494 AKAP4Q5JQC9 854 aa18.72■□□□□ 0.59
GHDC-203ENST00000428494 LARP1Q6PKG0 1096 aaKnown RBP18.72■□□□□ 0.59
GHDC-203ENST00000428494 MTERF4Q7Z6M4 381 aaKnown RBP18.72■□□□□ 0.59
GHDC-203ENST00000428494 G3BP1Q13283 466 aaKnown RBP eCLIP18.72■□□□□ 0.59
GHDC-203ENST00000428494 ZNF589Q86UQ0 364 aaPredicted RBP18.72■□□□□ 0.59
GHDC-203ENST00000428494 ERC1Q8IUD2 1116 aa18.72■□□□□ 0.59
GHDC-203ENST00000428494 DACT1Q9NYF0 836 aa18.72■□□□□ 0.59
GHDC-203ENST00000428494 MRVI1Q9Y6F6 885 aa18.72■□□□□ 0.59
GHDC-203ENST00000428494 ALDH1L1O75891 902 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 FSD1Q9BTV5 496 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 PHF8Q9UPP1 1060 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 GRM8O00222 908 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 RNMTO43148 476 aaKnown RBP18.71■□□□□ 0.59
GHDC-203ENST00000428494 CHGBP05060 677 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 MAP3K11Q16584 847 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 BLOC1S2Q6QNY1 142 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 NUP62CLQ9H1M0 184 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 PRDM4Q9UKN5 801 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
GHDC-203ENST00000428494 PTGS1P23219 599 aa18.7■□□□□ 0.58
GHDC-203ENST00000428494 TYRO3Q06418 890 aa18.7■□□□□ 0.58
GHDC-203ENST00000428494 TOB2Q14106 344 aaPredicted RBP18.7■□□□□ 0.58
GHDC-203ENST00000428494 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
GHDC-203ENST00000428494 LTN1O94822 1766 aa18.7■□□□□ 0.58
GHDC-203ENST00000428494 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
GHDC-203ENST00000428494 KDM3BQ7LBC6 1761 aa18.69■□□□□ 0.58
GHDC-203ENST00000428494 GTF2F1P35269 517 aaKnown RBP eCLIP18.69■□□□□ 0.58
GHDC-203ENST00000428494 FAM200AQ8TCP9 573 aa18.69■□□□□ 0.58
GHDC-203ENST00000428494 MED1Q15648 1581 aaPredicted RBP18.69■□□□□ 0.58
GHDC-203ENST00000428494 PSMA5P28066 241 aa18.69■□□□□ 0.58
GHDC-203ENST00000428494 PLEKHO1Q53GL0 409 aaPredicted RBP18.69■□□□□ 0.58
GHDC-203ENST00000428494 CCDC94Q9BW85 323 aaPredicted RBP18.69■□□□□ 0.58
GHDC-203ENST00000428494 NRBP1Q9UHY1 535 aa18.69■□□□□ 0.58
GHDC-203ENST00000428494 RPS6KB1P23443 525 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 ANO6Q4KMQ2 910 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 DDX11Q96FC9 970 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 SPATA32Q96LK8 384 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
GHDC-203ENST00000428494 JAK2O60674 1132 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 TNMDQ9H2S6 317 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 BCL2L12Q9HB09 334 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 ANKARQ7Z5J8 1434 aa18.68■□□□□ 0.58
GHDC-203ENST00000428494 GOLGA6L4A6NEF3 574 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 RIOK3O14730 519 aaKnown RBP18.67■□□□□ 0.58
GHDC-203ENST00000428494 LRMPQ12912 555 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 C1orf141Q5JVX7 400 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 LINS1Q8NG48 757 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 CBX8Q9HC52 389 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 PXDNQ92626 1479 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 IGKV5-2P06315 115 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 PSME1Q06323 249 aa18.67■□□□□ 0.58
GHDC-203ENST00000428494 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
GHDC-203ENST00000428494 LEO1Q8WVC0 666 aaPredicted RBP18.67■□□□□ 0.58
GHDC-203ENST00000428494 NR1I2O75469 434 aa18.66■□□□□ 0.58
GHDC-203ENST00000428494 EPHA10Q5JZY3 1008 aa18.66■□□□□ 0.58
GHDC-203ENST00000428494 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
GHDC-203ENST00000428494 PDCP20941 246 aa18.66■□□□□ 0.58
GHDC-203ENST00000428494 PDE4CQ08493 712 aa18.66■□□□□ 0.58
GHDC-203ENST00000428494 PGBD1Q96JS3 809 aa18.66■□□□□ 0.58
GHDC-203ENST00000428494 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
GHDC-203ENST00000428494 ELP1O95163 1332 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.65■□□□□ 0.58
GHDC-203ENST00000428494 HIP1O00291 1037 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 MYL6BP14649 208 aa18.65■□□□□ 0.58
GHDC-203ENST00000428494 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms