RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 SNRPA1P09661 255 aaKnown RBP11□□□□□ -0.65
ITSN1-216ENST00000428240 CRY2Q49AN0 593 aa11□□□□□ -0.65
ITSN1-216ENST00000428240 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
ITSN1-216ENST00000428240 CFAP44Q96MT7 982 aa11□□□□□ -0.65
ITSN1-216ENST00000428240 MCOLN1Q9GZU1 580 aa11□□□□□ -0.65
ITSN1-216ENST00000428240 PCDH10Q9P2E7 1040 aa11□□□□□ -0.65
ITSN1-216ENST00000428240 ABCC12Q96J65 1359 aa11□□□□□ -0.65
ITSN1-216ENST00000428240 GTF2E1P29083 439 aaPredicted RBP10.99□□□□□ -0.65
ITSN1-216ENST00000428240 CNGB1Q14028 1251 aaPredicted RBP10.99□□□□□ -0.65
ITSN1-216ENST00000428240 USP50Q70EL3 339 aaPredicted RBP10.99□□□□□ -0.65
ITSN1-216ENST00000428240 MAP2K2P36507 400 aa10.98□□□□□ -0.65
ITSN1-216ENST00000428240 MCM10Q7L590 875 aa10.98□□□□□ -0.65
ITSN1-216ENST00000428240 SAPCD2Q86UD0 394 aa10.98□□□□□ -0.65
ITSN1-216ENST00000428240 LARGE2Q8N3Y3 721 aa10.98□□□□□ -0.65
ITSN1-216ENST00000428240 TCERG1O14776 1098 aaKnown RBP10.97□□□□□ -0.65
ITSN1-216ENST00000428240 RGL2O15211 777 aa10.97□□□□□ -0.65
ITSN1-216ENST00000428240 PRKAR2BP31323 418 aa10.97□□□□□ -0.65
ITSN1-216ENST00000428240 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
ITSN1-216ENST00000428240 KIF7Q2M1P5 1343 aa10.97□□□□□ -0.65
ITSN1-216ENST00000428240 TNRC18O15417 2968 aaPredicted RBP10.97□□□□□ -0.65
ITSN1-216ENST00000428240 CELF2O95319 508 aaKnown RBP10.96□□□□□ -0.65
ITSN1-216ENST00000428240 HOXA10P31260 410 aaPredicted RBP10.96□□□□□ -0.65
ITSN1-216ENST00000428240 TRIM26Q12899 539 aaPredicted RBP10.96□□□□□ -0.65
ITSN1-216ENST00000428240 DGKZQ13574 1117 aa10.96□□□□□ -0.65
ITSN1-216ENST00000428240 DCTN1Q14203 1278 aa10.96□□□□□ -0.65
ITSN1-216ENST00000428240 NGEFQ8N5V2 710 aa10.96□□□□□ -0.65
ITSN1-216ENST00000428240 GLIS2Q9BZE0 524 aaPredicted RBP10.96□□□□□ -0.65
ITSN1-216ENST00000428240 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
ITSN1-216ENST00000428240 ADARB2Q9NS39 739 aaKnown RBP10.96□□□□□ -0.65
ITSN1-216ENST00000428240 GPRC5DQ9NZD1 345 aa10.96□□□□□ -0.65
ITSN1-216ENST00000428240 CLSPNQ9HAW4 1339 aa10.95□□□□□ -0.66
ITSN1-216ENST00000428240 PPEF1O14829 653 aaPredicted RBP10.95□□□□□ -0.66
ITSN1-216ENST00000428240 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
ITSN1-216ENST00000428240 AOC3Q16853 763 aa10.95□□□□□ -0.66
ITSN1-216ENST00000428240 NIM1KQ8IY84 436 aa10.95□□□□□ -0.66
ITSN1-216ENST00000428240 RPGRQ92834 1020 aaKnown RBP10.95□□□□□ -0.66
ITSN1-216ENST00000428240 ZIC5Q96T25 663 aa10.95□□□□□ -0.66
ITSN1-216ENST00000428240 NYXQ9GZU5 481 aa10.95□□□□□ -0.66
ITSN1-216ENST00000428240 UBN2Q6ZU65 1347 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 PPIP5K2O43314 1243 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 CA12O43570 354 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 GPTP24298 496 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 CXCL9Q07325 125 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 SUSD4Q5VX71 490 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 CIAPIN1Q6FI81 312 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 TTLL7Q6ZT98 887 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 C3orf67Q6ZVT6 689 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 RTF1Q92541 710 aaKnown RBP10.94□□□□□ -0.66
ITSN1-216ENST00000428240 HHIPL1Q96JK4 782 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 ZNF408Q9H9D4 720 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 MIS18AQ9NYP9 233 aa10.94□□□□□ -0.66
ITSN1-216ENST00000428240 RIC1Q4ADV7 1423 aa10.93□□□□□ -0.66
ITSN1-216ENST00000428240 NPC1L1Q9UHC9 1359 aa10.93□□□□□ -0.66
ITSN1-216ENST00000428240 ERVV-1B6SEH8 477 aa10.93□□□□□ -0.66
ITSN1-216ENST00000428240 GMPSP49915 693 aaPredicted RBP10.93□□□□□ -0.66
ITSN1-216ENST00000428240 HIRAP54198 1017 aaPredicted RBP10.93□□□□□ -0.66
ITSN1-216ENST00000428240 GRIPAP1Q4V328 841 aa10.93□□□□□ -0.66
ITSN1-216ENST00000428240 RBM17Q96I25 401 aaKnown RBP10.93□□□□□ -0.66
ITSN1-216ENST00000428240 CRAMP1Q96RY5 1269 aa10.93□□□□□ -0.66
ITSN1-216ENST00000428240 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
ITSN1-216ENST00000428240 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
ITSN1-216ENST00000428240 MAP3K15Q6ZN16 1313 aa10.92□□□□□ -0.66
ITSN1-216ENST00000428240 DLK2Q6UY11 383 aa10.92□□□□□ -0.66
ITSN1-216ENST00000428240 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
ITSN1-216ENST00000428240 ZNRF3Q9ULT6 936 aa10.92□□□□□ -0.66
ITSN1-216ENST00000428240 SHTN1A0MZ66 631 aa10.91□□□□□ -0.66
ITSN1-216ENST00000428240 NTSR2O95665 410 aa10.91□□□□□ -0.66
ITSN1-216ENST00000428240 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
ITSN1-216ENST00000428240 ZNF34Q8IZ26 560 aa10.91□□□□□ -0.66
ITSN1-216ENST00000428240 ZBTB3Q9H5J0 574 aa10.91□□□□□ -0.66
ITSN1-216ENST00000428240 RRP7AQ9Y3A4 280 aaKnown RBP10.91□□□□□ -0.66
ITSN1-216ENST00000428240 ATP6V0A2Q9Y487 856 aa10.91□□□□□ -0.66
ITSN1-216ENST00000428240 IBTKQ9P2D0 1353 aaPredicted RBP10.9□□□□□ -0.66
ITSN1-216ENST00000428240 RAD17O75943 681 aa10.9□□□□□ -0.66
ITSN1-216ENST00000428240 MYL6BP14649 208 aa10.9□□□□□ -0.66
ITSN1-216ENST00000428240 SOX10P56693 466 aa10.9□□□□□ -0.66
ITSN1-216ENST00000428240 KIF6Q6ZMV9 814 aa10.9□□□□□ -0.66
ITSN1-216ENST00000428240 RTFDC1Q9BY42 306 aaPredicted RBP10.9□□□□□ -0.66
ITSN1-216ENST00000428240 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
ITSN1-216ENST00000428240 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
ITSN1-216ENST00000428240 ABCC4O15439 1325 aa10.89□□□□□ -0.67
ITSN1-216ENST00000428240 HTATSF1O43719 755 aaKnown RBP10.89□□□□□ -0.67
ITSN1-216ENST00000428240 U2AF1L5P0DN76 240 aaPredicted RBP10.89□□□□□ -0.67
ITSN1-216ENST00000428240 HUNKP57058 714 aa10.89□□□□□ -0.67
ITSN1-216ENST00000428240 U2AF1Q01081 240 aaKnown RBP eCLIP10.89□□□□□ -0.67
ITSN1-216ENST00000428240 NOGQ13253 232 aa10.89□□□□□ -0.67
ITSN1-216ENST00000428240 CDC37L1Q7L3B6 337 aa10.89□□□□□ -0.67
ITSN1-216ENST00000428240 USP48Q86UV5 1035 aa10.89□□□□□ -0.67
ITSN1-216ENST00000428240 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
ITSN1-216ENST00000428240 BCL2L13Q9BXK5 485 aa10.89□□□□□ -0.67
ITSN1-216ENST00000428240 CDHR2Q9BYE9 1310 aa10.88□□□□□ -0.67
ITSN1-216ENST00000428240 LAMB4A4D0S4 1761 aa10.88□□□□□ -0.67
ITSN1-216ENST00000428240 YDJCA8MPS7 323 aa10.88□□□□□ -0.67
ITSN1-216ENST00000428240 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
ITSN1-216ENST00000428240 GIGYF2Q6Y7W6 1299 aaKnown RBP10.88□□□□□ -0.67
ITSN1-216ENST00000428240 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
ITSN1-216ENST00000428240 NLRP3Q96P20 1036 aa10.88□□□□□ -0.67
ITSN1-216ENST00000428240 TMX4Q9H1E5 349 aaPredicted RBP10.88□□□□□ -0.67
ITSN1-216ENST00000428240 CNOT7Q9UIV1 285 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms