RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TRAK2O60296 914 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 CCDC172P0C7W6 258 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 SMC1AQ14683 1233 aaKnown RBP6.59□□□□□ -1.35
HERC4-206ENST00000427635 CCDC14Q49A88 953 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 DPY19L2Q6NUT2 758 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 MSANTD4Q8NCY6 345 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 TBC1D5Q92609 795 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.59□□□□□ -1.35
HERC4-206ENST00000427635 SH2D4AQ9H788 454 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 HAUS2Q9NVX0 235 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 MVPQ14764 893 aaKnown RBP6.59□□□□□ -1.35
HERC4-206ENST00000427635 ZNF280DQ6N043 979 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 PPP4R4Q6NUP7 873 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 HYPKQ9NX55 129 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.59□□□□□ -1.35
HERC4-206ENST00000427635 ZNF213O14771 459 aa6.59□□□□□ -1.36
HERC4-206ENST00000427635 RAPGEF3O95398 923 aa6.59□□□□□ -1.36
HERC4-206ENST00000427635 DDB1Q16531 1140 aa6.59□□□□□ -1.36
HERC4-206ENST00000427635 CEP120Q8N960 986 aa6.59□□□□□ -1.36
HERC4-206ENST00000427635 CACYBPQ9HB71 228 aaKnown RBP6.59□□□□□ -1.36
HERC4-206ENST00000427635 TSPY3P0CV98 308 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 TSPY8P0CW00 308 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 NEK4P51957 841 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 NBPF1Q3BBV0 1214 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 NLRP3Q96P20 1036 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 CCDC87Q9NVE4 849 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 ANKRD30BQ9BXX2 1392 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 DAPK1P53355 1430 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 RAB11FIP3O75154 756 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 FAM160A1Q05DH4 1040 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 RRS1Q15050 365 aaKnown RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 IFNL2Q8IZJ0 200 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 SMARCC2Q8TAQ2 1214 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 PIK3R5Q8WYR1 880 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 TCP11L1Q9NUJ3 509 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 NOB1Q9ULX3 412 aaKnown RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 PICALMQ13492 652 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 GET4Q7L5D6 327 aaPredicted RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 SUPT20HQ8NEM7 779 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 FAM200AQ8TCP9 573 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 GOLGA1Q92805 767 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 PYM1Q9BRP8 204 aaKnown RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 CCDC113Q9H0I3 377 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 FGD5Q6ZNL6 1462 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 ANKRD50Q9ULJ7 1429 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 KRT85P78386 507 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 ARID5AQ03989 594 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 CFAP70Q5T0N1 1121 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 ZC3H12CQ9C0D7 883 aaKnown RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 CWC25Q9NXE8 425 aaPredicted RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 STK24Q9Y6E0 443 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 KRT13P13646 458 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 LARP1BQ659C4 914 aaKnown RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 OTUD7BQ6GQQ9 843 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
HERC4-206ENST00000427635 SPATA24Q86W54 205 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 FAM114A1Q8IWE2 563 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 GTF3C6Q969F1 213 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 FAM212AQ96EL1 285 aa6.58□□□□□ -1.36
HERC4-206ENST00000427635 MBD3O95983 291 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 PDE6BP35913 854 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 IKBKGQ9Y6K9 419 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 IFIT3O14879 490 aaKnown RBP6.57□□□□□ -1.36
HERC4-206ENST00000427635 ATXN8OSP0DMR3 200 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 CCDC40Q4G0X9 1142 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 NACA2Q9H009 215 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 NBPF3Q9H094 633 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 ATAD2BQ9ULI0 1458 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 GOLGA8AA7E2F4 631 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 GOLGA8BA8MQT2 603 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 CCDC192P0DO97 292 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 JAKMIP1Q96N16 626 aaKnown RBP6.57□□□□□ -1.36
HERC4-206ENST00000427635 NCOA2Q15596 1464 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 NAIPQ13075 1403 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 VIMP08670 466 aaKnown RBP6.57□□□□□ -1.36
HERC4-206ENST00000427635 UQCRFS1P1P0C7P4 283 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 SLC8A3P57103 927 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 TCERG1LQ5VWI1 586 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 CEP135Q66GS9 1140 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 PPP1R14CQ8TAE6 165 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 HAUS7Q99871 368 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 TCHPQ9BT92 498 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 KDM4CQ9H3R0 1056 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 AMOTL2Q9Y2J4 779 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 ATP5J2-PTCD1G3V325 749 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 NR1I2O75469 434 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 TNNT1P13805 278 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 EXOSC9Q06265 439 aaKnown RBP6.57□□□□□ -1.36
HERC4-206ENST00000427635 UBE4AQ14139 1066 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 CWC27Q6UX04 472 aaKnown RBP6.57□□□□□ -1.36
HERC4-206ENST00000427635 CFAP57Q96MR6 1250 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 NESP48681 1621 aa6.57□□□□□ -1.36
HERC4-206ENST00000427635 FIBPO43427 364 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 PLCG2P16885 1265 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 TAF7Q15545 349 aaPredicted RBP6.56□□□□□ -1.36
HERC4-206ENST00000427635 DPH6Q7L8W6 267 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 HACE1Q8IYU2 909 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 ZNF513Q8N8E2 541 aaPredicted RBP6.56□□□□□ -1.36
HERC4-206ENST00000427635 KCNG1Q9UIX4 513 aa6.56□□□□□ -1.36
HERC4-206ENST00000427635 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms